RNA–Protein interactions for RNA: ENST00000298838.10

PACSIN3-201, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACSIN3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-201ENST00000298838 CFC1BP0CG36 223 aa13.39□□□□□ -0.27
PACSIN3-201ENST00000298838 CFC1P0CG37 223 aa13.39□□□□□ -0.27
PACSIN3-201ENST00000298838 A0A0B4J2C4 111 aa13.38□□□□□ -0.27
PACSIN3-201ENST00000298838 C9orf163Q8N9P6 203 aa13.38□□□□□ -0.27
PACSIN3-201ENST00000298838 RAB37Q96AX2 223 aa13.37□□□□□ -0.27
PACSIN3-201ENST00000298838 PKIGQ9Y2B9 76 aa13.36□□□□□ -0.27
PACSIN3-201ENST00000298838 NDUFC2O95298 119 aa13.36□□□□□ -0.27
PACSIN3-201ENST00000298838 GAGE2BQ13066 116 aa13.35□□□□□ -0.27
PACSIN3-201ENST00000298838 C9orf129Q5T035 196 aaKnown RBP13.34□□□□□ -0.27
PACSIN3-201ENST00000298838 PRO1854Q9UHT4 67 aa13.34□□□□□ -0.27
PACSIN3-201ENST00000298838 DNAH17Q9UFH2 4485 aa13.33□□□□□ -0.27
PACSIN3-201ENST00000298838 IGKV2-28A0A075B6P5 120 aa13.32□□□□□ -0.28
PACSIN3-201ENST00000298838 C16orf90A8MZG2 172 aa13.32□□□□□ -0.28
PACSIN3-201ENST00000298838 IGKV2D-28P01615 120 aa13.32□□□□□ -0.28
PACSIN3-201ENST00000298838 FRAS1Q86XX4 4008 aa13.32□□□□□ -0.28
PACSIN3-201ENST00000298838 Q8NDZ9 215 aa13.32□□□□□ -0.28
PACSIN3-201ENST00000298838 IGLV5-52A0A0A0MRZ9 124 aa13.31□□□□□ -0.28
PACSIN3-201ENST00000298838 TAX1BP3O14907 124 aa13.31□□□□□ -0.28
PACSIN3-201ENST00000298838 A0A096LNI7 61 aa13.3□□□□□ -0.28
PACSIN3-201ENST00000298838 TRAV13-2A0A0B4J235 113 aa13.3□□□□□ -0.28
PACSIN3-201ENST00000298838 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
PACSIN3-201ENST00000298838 PRR3P79522 188 aaKnown RBP13.29□□□□□ -0.28
PACSIN3-201ENST00000298838 SDIM1Q6ZPB5 146 aa13.29□□□□□ -0.28
PACSIN3-201ENST00000298838 LINC00337Q8N6G1 96 aa13.29□□□□□ -0.28
PACSIN3-201ENST00000298838 PGPEP1Q9NXJ5 209 aa13.29□□□□□ -0.28
PACSIN3-201ENST00000298838 KMT2CQ8NEZ4 4911 aaKnown RBP13.28□□□□□ -0.28
PACSIN3-201ENST00000298838 IGKV2-24A0A0C4DH68 120 aa13.28□□□□□ -0.28
PACSIN3-201ENST00000298838 NCR3O14931 201 aa13.28□□□□□ -0.28
PACSIN3-201ENST00000298838 FUSP35637 526 aaKnown RBP eCLIP13.28□□□□□ -0.28
PACSIN3-201ENST00000298838 VPREB1P12018 145 aa13.27□□□□□ -0.28
PACSIN3-201ENST00000298838 RPL13AP40429 203 aaKnown RBP13.27□□□□□ -0.28
PACSIN3-201ENST00000298838 PLA2G2DQ9UNK4 145 aa13.27□□□□□ -0.29
PACSIN3-201ENST00000298838 H7C2G1 150 aa13.26□□□□□ -0.29
PACSIN3-201ENST00000298838 LINC00336Q6ZUF6 198 aa13.26□□□□□ -0.29
PACSIN3-201ENST00000298838 TRBV10-2A0A0K0K1G8 114 aa13.25□□□□□ -0.29
PACSIN3-201ENST00000298838 TSPAN13O95857 204 aa13.25□□□□□ -0.29
PACSIN3-201ENST00000298838 Q1RN00 199 aa13.25□□□□□ -0.29
PACSIN3-201ENST00000298838 LINC00474Q9P2X8 69 aa13.25□□□□□ -0.29
PACSIN3-201ENST00000298838 OR13C6PQ8NH95 151 aa13.25□□□□□ -0.29
PACSIN3-201ENST00000298838 C9orf118A6NHY6 69 aa13.24□□□□□ -0.29
PACSIN3-201ENST00000298838 SERTAD4-AS1Q5TG53 156 aa13.24□□□□□ -0.29
PACSIN3-201ENST00000298838 FAM168BA1KXE4 195 aa13.23□□□□□ -0.29
PACSIN3-201ENST00000298838 CHTF8P0CG12 524 aa13.23□□□□□ -0.29
PACSIN3-201ENST00000298838 KRTAP10-2P60368 255 aa13.23□□□□□ -0.29
PACSIN3-201ENST00000298838 NKAPP1Q8N9T2 125 aa13.23□□□□□ -0.29
PACSIN3-201ENST00000298838 RYR2Q92736 4967 aa13.23□□□□□ -0.29
PACSIN3-201ENST00000298838 H3BUT2 72 aa13.22□□□□□ -0.29
PACSIN3-201ENST00000298838 S100A7L2Q5SY68 101 aa13.22□□□□□ -0.29
PACSIN3-201ENST00000298838 NAA38Q9BRA0 125 aaKnown RBP13.22□□□□□ -0.29
PACSIN3-201ENST00000298838 TMEM126AQ9H061 195 aa13.22□□□□□ -0.29
PACSIN3-201ENST00000298838 M0R378 163 aa13.2□□□□□ -0.3
PACSIN3-201ENST00000298838 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
PACSIN3-201ENST00000298838 FAT2Q9NYQ8 4349 aa13.2□□□□□ -0.3
PACSIN3-201ENST00000298838 HECTD4Q9Y4D8 3996 aa13.2□□□□□ -0.3
PACSIN3-201ENST00000298838 IGLV5-37A0A075B6J1 123 aa13.2□□□□□ -0.3
PACSIN3-201ENST00000298838 KRTAP7-1Q8IUC3 87 aa13.18□□□□□ -0.3
PACSIN3-201ENST00000298838 IGLV6-57P01721 117 aa13.18□□□□□ -0.3
PACSIN3-201ENST00000298838 PSMB2P49721 201 aa13.17□□□□□ -0.3
PACSIN3-201ENST00000298838 SPACA4Q8TDM5 124 aa13.17□□□□□ -0.3
PACSIN3-201ENST00000298838 TRBV10-3A0A0K0K1G6 114 aa13.16□□□□□ -0.3
PACSIN3-201ENST00000298838 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.16□□□□□ -0.3
PACSIN3-201ENST00000298838 A0A1W2PNN7 141 aa13.16□□□□□ -0.3
PACSIN3-201ENST00000298838 PANO1I0J062 215 aa13.16□□□□□ -0.3
PACSIN3-201ENST00000298838 C22orf24Q9Y442 160 aa13.16□□□□□ -0.3
PACSIN3-201ENST00000298838 A0A1W2PPM0 123 aa13.15□□□□□ -0.3
PACSIN3-201ENST00000298838 SMIM11BQ8TCY0 68 aa13.15□□□□□ -0.3
PACSIN3-201ENST00000298838 C7orf33Q8WU49 177 aa13.15□□□□□ -0.3
PACSIN3-201ENST00000298838 DPH3Q96FX2 82 aa13.15□□□□□ -0.3
PACSIN3-201ENST00000298838 M0QXV9 152 aa13.14□□□□□ -0.31
PACSIN3-201ENST00000298838 RPL28P46779 137 aaKnown RBP13.14□□□□□ -0.31
PACSIN3-201ENST00000298838 MRPL55Q7Z7F7 128 aaKnown RBP13.14□□□□□ -0.31
PACSIN3-201ENST00000298838 GAGE10A6NGK3 116 aa13.13□□□□□ -0.31
PACSIN3-201ENST00000298838 TRIAP1O43715 76 aa13.13□□□□□ -0.31
PACSIN3-201ENST00000298838 DNAH11Q96DT5 4516 aa13.13□□□□□ -0.31
PACSIN3-201ENST00000298838 FABP2P12104 132 aa13.13□□□□□ -0.31
PACSIN3-201ENST00000298838 A0A1B0GV90 55 aa13.12□□□□□ -0.31
PACSIN3-201ENST00000298838 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
PACSIN3-201ENST00000298838 COX6CP09669 75 aa13.11□□□□□ -0.31
PACSIN3-201ENST00000298838 CBY1Q9Y3M2 126 aa13.11□□□□□ -0.31
PACSIN3-201ENST00000298838 TRAV23DV6A0A075B6W5 121 aa13.11□□□□□ -0.31
PACSIN3-201ENST00000298838 SCGB1C2P0DMR2 95 aa13.1□□□□□ -0.31
PACSIN3-201ENST00000298838 LINC00167Q96N53 147 aa13.1□□□□□ -0.31
PACSIN3-201ENST00000298838 PKD1P98161 4303 aa13.1□□□□□ -0.31
PACSIN3-201ENST00000298838 VAMP3Q15836 100 aa13.09□□□□□ -0.31
PACSIN3-201ENST00000298838 A0A087WYN8 130 aa13.08□□□□□ -0.32
PACSIN3-201ENST00000298838 A0A1B0GVY2 172 aa13.08□□□□□ -0.32
PACSIN3-201ENST00000298838 IGLV1-50A0A075B6I6 118 aa13.07□□□□□ -0.32
PACSIN3-201ENST00000298838 RPL37AP8A6NKH3 93 aa13.07□□□□□ -0.32
PACSIN3-201ENST00000298838 DNAH5Q8TE73 4624 aa13.07□□□□□ -0.32
PACSIN3-201ENST00000298838 C6orf99Q4VX62 202 aa13.06□□□□□ -0.32
PACSIN3-201ENST00000298838 KCNQ1DNQ9H478 68 aa13.06□□□□□ -0.32
PACSIN3-201ENST00000298838 SPCS1Q9Y6A9 102 aa13.06□□□□□ -0.32
PACSIN3-201ENST00000298838 EPM2AB3EWF7 344 aa13.05□□□□□ -0.32
PACSIN3-201ENST00000298838 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
PACSIN3-201ENST00000298838 KRTAP10-1P60331 282 aa13.05□□□□□ -0.32
PACSIN3-201ENST00000298838 PHF5AQ7RTV0 110 aaKnown RBP13.04□□□□□ -0.32
PACSIN3-201ENST00000298838 PLAC8Q9NZF1 115 aa13.04□□□□□ -0.32
PACSIN3-201ENST00000298838 DIRC1Q969H9 104 aa13.04□□□□□ -0.32
PACSIN3-201ENST00000298838 PRYO14603 147 aa13.02□□□□□ -0.32
PACSIN3-201ENST00000298838 TRBV20-1A0A075B6N2 111 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms