RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 OR13C6PQ8NH95 151 aa16.92■□□□□ 0.3
SDCCAG3-201ENST00000298537 SIGMAR1Q99720 223 aa16.92■□□□□ 0.3
SDCCAG3-201ENST00000298537 C9JAW5 83 aa16.91■□□□□ 0.3
SDCCAG3-201ENST00000298537 XAGE1AQ9HD64 81 aa16.91■□□□□ 0.3
SDCCAG3-201ENST00000298537 GVQW2A0A096LPI5 108 aaPredicted RBP16.91■□□□□ 0.3
SDCCAG3-201ENST00000298537 SMIM11BQ8TCY0 68 aa16.91■□□□□ 0.3
SDCCAG3-201ENST00000298537 LECT2O14960 151 aa16.9■□□□□ 0.3
SDCCAG3-201ENST00000298537 COX6CP09669 75 aa16.9■□□□□ 0.3
SDCCAG3-201ENST00000298537 ATXN8Q156A1 80 aa16.9■□□□□ 0.3
SDCCAG3-201ENST00000298537 A0A1B0GV72 72 aa16.9■□□□□ 0.3
SDCCAG3-201ENST00000298537 NCR3O14931 201 aa16.88■□□□□ 0.29
SDCCAG3-201ENST00000298537 LINC01620Q4KN68 170 aa16.88■□□□□ 0.29
SDCCAG3-201ENST00000298537 FAM218AQ96MZ4 157 aa16.88■□□□□ 0.29
SDCCAG3-201ENST00000298537 UBE2DNLQ8IWF7 75 aa16.87■□□□□ 0.29
SDCCAG3-201ENST00000298537 LST1O00453 97 aa16.86■□□□□ 0.29
SDCCAG3-201ENST00000298537 SLPIP03973 132 aa16.86■□□□□ 0.29
SDCCAG3-201ENST00000298537 USP17L23D6RBM5 183 aa16.85■□□□□ 0.29
SDCCAG3-201ENST00000298537 RPL28P46779 137 aaKnown RBP16.85■□□□□ 0.29
SDCCAG3-201ENST00000298537 FBN3Q75N90 2809 aa16.85■□□□□ 0.29
SDCCAG3-201ENST00000298537 SLC25A20O43772 301 aa16.84■□□□□ 0.29
SDCCAG3-201ENST00000298537 C2orf48Q96LS8 159 aa16.84■□□□□ 0.29
SDCCAG3-201ENST00000298537 NDUFC2O95298 119 aa16.82■□□□□ 0.28
SDCCAG3-201ENST00000298537 SYCNQ0VAF6 134 aa16.8■□□□□ 0.28
SDCCAG3-201ENST00000298537 GAGE2EQ4V326 116 aa16.8■□□□□ 0.28
SDCCAG3-201ENST00000298537 GAGE2DQ9UEU5 116 aa16.8■□□□□ 0.28
SDCCAG3-201ENST00000298537 Q6ZRP5 223 aa16.79■□□□□ 0.28
SDCCAG3-201ENST00000298537 NUPR2A6NF83 97 aa16.78■□□□□ 0.28
SDCCAG3-201ENST00000298537 RPL18AQ02543 176 aaKnown RBP16.78■□□□□ 0.28
SDCCAG3-201ENST00000298537 ANKRD29Q8N6D5 301 aa16.78■□□□□ 0.28
SDCCAG3-201ENST00000298537 VPS13DQ5THJ4 4388 aa16.76■□□□□ 0.27
SDCCAG3-201ENST00000298537 A0A087WYN8 130 aa16.75■□□□□ 0.27
SDCCAG3-201ENST00000298537 TRBV10-2A0A0K0K1G8 114 aa16.75■□□□□ 0.27
SDCCAG3-201ENST00000298537 NDUFC2-KCTD14E9PQ53 114 aa16.75■□□□□ 0.27
SDCCAG3-201ENST00000298537 RMI2Q96E14 147 aa16.75■□□□□ 0.27
SDCCAG3-201ENST00000298537 CARD19Q96LW7 228 aa16.74■□□□□ 0.27
SDCCAG3-201ENST00000298537 MUC7Q8TAX7 377 aa16.74■□□□□ 0.27
SDCCAG3-201ENST00000298537 TGP01266 2768 aa16.73■□□□□ 0.27
SDCCAG3-201ENST00000298537 TEN1Q86WV5 123 aa16.71■□□□□ 0.27
SDCCAG3-201ENST00000298537 TMEM126AQ9H061 195 aa16.71■□□□□ 0.27
SDCCAG3-201ENST00000298537 J3QR89 54 aa16.71■□□□□ 0.27
SDCCAG3-201ENST00000298537 S100A7L2Q5SY68 101 aa16.7■□□□□ 0.26
SDCCAG3-201ENST00000298537 C9orf129Q5T035 196 aaKnown RBP16.7■□□□□ 0.26
SDCCAG3-201ENST00000298537 KMT2AQ03164 3969 aa16.69■□□□□ 0.26
SDCCAG3-201ENST00000298537 KRTAP21-3Q3LHN1 58 aa16.69■□□□□ 0.26
SDCCAG3-201ENST00000298537 VPREB1P12018 145 aa16.68■□□□□ 0.26
SDCCAG3-201ENST00000298537 TRBV10-3A0A0K0K1G6 114 aa16.66■□□□□ 0.26
SDCCAG3-201ENST00000298537 C6orf99Q4VX62 202 aa16.66■□□□□ 0.26
SDCCAG3-201ENST00000298537 IGLV6-57P01721 117 aa16.65■□□□□ 0.26
SDCCAG3-201ENST00000298537 TEX49A0A1B0GTD5 131 aa16.65■□□□□ 0.26
SDCCAG3-201ENST00000298537 F8WDY8 70 aa16.64■□□□□ 0.25
SDCCAG3-201ENST00000298537 TRACP01848 142 aa16.64■□□□□ 0.25
SDCCAG3-201ENST00000298537 PSCAO43653 123 aa16.64■□□□□ 0.25
SDCCAG3-201ENST00000298537 NBDYA0A0U1RRE5 68 aa16.63■□□□□ 0.25
SDCCAG3-201ENST00000298537 M0QXV9 152 aa16.63■□□□□ 0.25
SDCCAG3-201ENST00000298537 M0R2N4 97 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 SERTAD4-AS1Q5TG53 156 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 H0YGX0 51 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 H3BT86 120 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 LINC01600Q96MT4 127 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 C22orf24Q9Y442 160 aa16.62■□□□□ 0.25
SDCCAG3-201ENST00000298537 PPDPFLQ8WWR9 84 aa16.61■□□□□ 0.25
SDCCAG3-201ENST00000298537 FAM168BA1KXE4 195 aa16.61■□□□□ 0.25
SDCCAG3-201ENST00000298537 BAALC-AS2P0C853 105 aa16.58■□□□□ 0.25
SDCCAG3-201ENST00000298537 GAGE2BQ13066 116 aa16.58■□□□□ 0.24
SDCCAG3-201ENST00000298537 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.57■□□□□ 0.24
SDCCAG3-201ENST00000298537 TLX1NBP0CAT3 122 aa16.57■□□□□ 0.24
SDCCAG3-201ENST00000298537 DNAH2Q9P225 4427 aa16.56■□□□□ 0.24
SDCCAG3-201ENST00000298537 CDIP1Q9H305 208 aa16.55■□□□□ 0.24
SDCCAG3-201ENST00000298537 KRTAP7-1Q8IUC3 87 aa16.54■□□□□ 0.24
SDCCAG3-201ENST00000298537 TRAV23DV6A0A075B6W5 121 aa16.54■□□□□ 0.24
SDCCAG3-201ENST00000298537 M0R378 163 aa16.53■□□□□ 0.24
SDCCAG3-201ENST00000298537 DNAL4O96015 105 aa16.53■□□□□ 0.24
SDCCAG3-201ENST00000298537 Q6ZRN7 208 aaPredicted RBP16.52■□□□□ 0.24
SDCCAG3-201ENST00000298537 TTC32Q5I0X7 151 aa16.5■□□□□ 0.23
SDCCAG3-201ENST00000298537 Q8N814 137 aa16.5■□□□□ 0.23
SDCCAG3-201ENST00000298537 LRCOL1A6NCL2 159 aa16.5■□□□□ 0.23
SDCCAG3-201ENST00000298537 MT-ATP8P03928 68 aa16.48■□□□□ 0.23
SDCCAG3-201ENST00000298537 C7orf33Q8WU49 177 aa16.48■□□□□ 0.23
SDCCAG3-201ENST00000298537 ZNF73O43830 326 aaPredicted RBP16.48■□□□□ 0.23
SDCCAG3-201ENST00000298537 LINC00575Q6W349 94 aa16.47■□□□□ 0.23
SDCCAG3-201ENST00000298537 LOC107984640A0A0U1RRK4 108 aa16.46■□□□□ 0.23
SDCCAG3-201ENST00000298537 NKAPP1Q8N9T2 125 aa16.46■□□□□ 0.23
SDCCAG3-201ENST00000298537 XGP55808 180 aa16.45■□□□□ 0.22
SDCCAG3-201ENST00000298537 FAM19A5Q7Z5A7 132 aaPredicted RBP16.45■□□□□ 0.22
SDCCAG3-201ENST00000298537 DIRC1Q969H9 104 aa16.45■□□□□ 0.22
SDCCAG3-201ENST00000298537 A0A096LNI7 61 aa16.45■□□□□ 0.22
SDCCAG3-201ENST00000298537 CNBPP62633 177 aaKnown RBP16.45■□□□□ 0.22
SDCCAG3-201ENST00000298537 RPL37AP8A6NKH3 93 aa16.44■□□□□ 0.22
SDCCAG3-201ENST00000298537 IGKV2-24A0A0C4DH68 120 aa16.44■□□□□ 0.22
SDCCAG3-201ENST00000298537 LINC00167Q96N53 147 aa16.43■□□□□ 0.22
SDCCAG3-201ENST00000298537 FUSP35637 526 aaKnown RBP eCLIP16.41■□□□□ 0.22
SDCCAG3-201ENST00000298537 ORMDL1Q9P0S3 153 aa16.4■□□□□ 0.22
SDCCAG3-201ENST00000298537 PLA2G2DQ9UNK4 145 aa16.4■□□□□ 0.22
SDCCAG3-201ENST00000298537 SS18L2Q9UHA2 77 aa16.39■□□□□ 0.21
SDCCAG3-201ENST00000298537 hADV29S1A0JD25 119 aa16.39■□□□□ 0.21
SDCCAG3-201ENST00000298537 CHTF8P0CG12 524 aa16.38■□□□□ 0.21
SDCCAG3-201ENST00000298537 COX7BP24311 80 aa16.37■□□□□ 0.21
SDCCAG3-201ENST00000298537 ELOF1P60002 83 aaKnown RBP16.37■□□□□ 0.21
SDCCAG3-201ENST00000298537 HECTD4Q9Y4D8 3996 aa16.37■□□□□ 0.21
SDCCAG3-201ENST00000298537 A0A1B0GX51 115 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms