RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GAGE2EQ4V326 116 aa15.86■□□□□ 0.13
GTF2A1-201ENST00000298173 COL5A1-AS1Q5SY13 56 aa15.86■□□□□ 0.13
GTF2A1-201ENST00000298173 GAGE2DQ9UEU5 116 aa15.86■□□□□ 0.13
GTF2A1-201ENST00000298173 LBHQ53QV2 105 aaPredicted RBP15.85■□□□□ 0.13
GTF2A1-201ENST00000298173 A0A0B4J2C4 111 aa15.84■□□□□ 0.13
GTF2A1-201ENST00000298173 K7ERJ3 54 aa15.84■□□□□ 0.13
GTF2A1-201ENST00000298173 Q8NDZ9 215 aa15.84■□□□□ 0.13
GTF2A1-201ENST00000298173 NDUFC2O95298 119 aa15.83■□□□□ 0.13
GTF2A1-201ENST00000298173 RPL18AQ02543 176 aaKnown RBP15.83■□□□□ 0.13
GTF2A1-201ENST00000298173 C9orf129Q5T035 196 aaKnown RBP15.83■□□□□ 0.13
GTF2A1-201ENST00000298173 KMT2CQ8NEZ4 4911 aaKnown RBP15.83■□□□□ 0.12
GTF2A1-201ENST00000298173 FAT2Q9NYQ8 4349 aa15.83■□□□□ 0.12
GTF2A1-201ENST00000298173 IGKV2-28A0A075B6P5 120 aa15.82■□□□□ 0.12
GTF2A1-201ENST00000298173 IGKV2D-28P01615 120 aa15.82■□□□□ 0.12
GTF2A1-201ENST00000298173 HECTD4Q9Y4D8 3996 aa15.81■□□□□ 0.12
GTF2A1-201ENST00000298173 RYR2Q92736 4967 aa15.8■□□□□ 0.12
GTF2A1-201ENST00000298173 TAX1BP3O14907 124 aa15.79■□□□□ 0.12
GTF2A1-201ENST00000298173 GAGE2BQ13066 116 aa15.79■□□□□ 0.12
GTF2A1-201ENST00000298173 SDIM1Q6ZPB5 146 aa15.79■□□□□ 0.12
GTF2A1-201ENST00000298173 DNAH11Q96DT5 4516 aa15.79■□□□□ 0.12
GTF2A1-201ENST00000298173 PRO1854Q9UHT4 67 aa15.79■□□□□ 0.12
GTF2A1-201ENST00000298173 C16orf90A8MZG2 172 aa15.78■□□□□ 0.12
GTF2A1-201ENST00000298173 PRR3P79522 188 aaKnown RBP15.78■□□□□ 0.12
GTF2A1-201ENST00000298173 RAB37Q96AX2 223 aa15.77■□□□□ 0.12
GTF2A1-201ENST00000298173 LINC01620Q4KN68 170 aa15.76■□□□□ 0.11
GTF2A1-201ENST00000298173 A0A096LNI7 61 aa15.76■□□□□ 0.11
GTF2A1-201ENST00000298173 FUSP35637 526 aaKnown RBP eCLIP15.76■□□□□ 0.11
GTF2A1-201ENST00000298173 LINC00337Q8N6G1 96 aa15.76■□□□□ 0.11
GTF2A1-201ENST00000298173 PLA2G2DQ9UNK4 145 aa15.76■□□□□ 0.11
GTF2A1-201ENST00000298173 VPREB1P12018 145 aa15.75■□□□□ 0.11
GTF2A1-201ENST00000298173 PKIGQ9Y2B9 76 aa15.74■□□□□ 0.11
GTF2A1-201ENST00000298173 IGLV5-52A0A0A0MRZ9 124 aa15.72■□□□□ 0.11
GTF2A1-201ENST00000298173 TRAV13-2A0A0B4J235 113 aa15.72■□□□□ 0.11
GTF2A1-201ENST00000298173 TRBV10-2A0A0K0K1G8 114 aa15.71■□□□□ 0.11
GTF2A1-201ENST00000298173 KRTAP10-2P60368 255 aa15.71■□□□□ 0.11
GTF2A1-201ENST00000298173 KRTAP7-1Q8IUC3 87 aa15.71■□□□□ 0.11
GTF2A1-201ENST00000298173 SERTAD4-AS1Q5TG53 156 aa15.7■□□□□ 0.1
GTF2A1-201ENST00000298173 LINC00336Q6ZUF6 198 aa15.7■□□□□ 0.1
GTF2A1-201ENST00000298173 PGPEP1Q9NXJ5 209 aa15.7■□□□□ 0.1
GTF2A1-201ENST00000298173 IGKV2-24A0A0C4DH68 120 aa15.69■□□□□ 0.1
GTF2A1-201ENST00000298173 FAM168BA1KXE4 195 aa15.69■□□□□ 0.1
GTF2A1-201ENST00000298173 C9orf118A6NHY6 69 aa15.69■□□□□ 0.1
GTF2A1-201ENST00000298173 TSPAN13O95857 204 aa15.69■□□□□ 0.1
GTF2A1-201ENST00000298173 PKD1P98161 4303 aa15.69■□□□□ 0.1
GTF2A1-201ENST00000298173 NCR3O14931 201 aa15.68■□□□□ 0.1
GTF2A1-201ENST00000298173 RPL13AP40429 203 aaKnown RBP15.68■□□□□ 0.1
GTF2A1-201ENST00000298173 DNAH5Q8TE73 4624 aa15.68■□□□□ 0.1
GTF2A1-201ENST00000298173 IGLV5-37A0A075B6J1 123 aa15.67■□□□□ 0.1
GTF2A1-201ENST00000298173 CHTF8P0CG12 524 aa15.67■□□□□ 0.1
GTF2A1-201ENST00000298173 LINC00474Q9P2X8 69 aa15.65■□□□□ 0.1
GTF2A1-201ENST00000298173 M0R378 163 aa15.64■□□□□ 0.09
GTF2A1-201ENST00000298173 TMEM126AQ9H061 195 aa15.64■□□□□ 0.09
GTF2A1-201ENST00000298173 A0A1W2PNN7 141 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 H7C2G1 150 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 PANO1I0J062 215 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 OR13C6PQ8NH95 151 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 NAA38Q9BRA0 125 aaKnown RBP15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 H3BUT2 72 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 IGLV6-57P01721 117 aa15.63■□□□□ 0.09
GTF2A1-201ENST00000298173 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.61■□□□□ 0.09
GTF2A1-201ENST00000298173 SPACA4Q8TDM5 124 aa15.6■□□□□ 0.09
GTF2A1-201ENST00000298173 C22orf24Q9Y442 160 aa15.6■□□□□ 0.09
GTF2A1-201ENST00000298173 S100A7L2Q5SY68 101 aa15.6■□□□□ 0.09
GTF2A1-201ENST00000298173 NKAPP1Q8N9T2 125 aa15.6■□□□□ 0.09
GTF2A1-201ENST00000298173 Q1RN00 199 aa15.59■□□□□ 0.09
GTF2A1-201ENST00000298173 FAM19A5Q7Z5A7 132 aaPredicted RBP15.59■□□□□ 0.09
GTF2A1-201ENST00000298173 TRBV10-3A0A0K0K1G6 114 aa15.58■□□□□ 0.08
GTF2A1-201ENST00000298173 RPL28P46779 137 aaKnown RBP15.58■□□□□ 0.08
GTF2A1-201ENST00000298173 SMIM11BQ8TCY0 68 aa15.58■□□□□ 0.08
GTF2A1-201ENST00000298173 C7orf33Q8WU49 177 aa15.58■□□□□ 0.08
GTF2A1-201ENST00000298173 EPM2AB3EWF7 344 aa15.57■□□□□ 0.08
GTF2A1-201ENST00000298173 A0A1B0GVY2 172 aa15.57■□□□□ 0.08
GTF2A1-201ENST00000298173 A0A1W2PPM0 123 aa15.56■□□□□ 0.08
GTF2A1-201ENST00000298173 TRIAP1O43715 76 aa15.55■□□□□ 0.08
GTF2A1-201ENST00000298173 A0A1B0GV90 55 aa15.54■□□□□ 0.08
GTF2A1-201ENST00000298173 MRPL55Q7Z7F7 128 aaKnown RBP15.54■□□□□ 0.08
GTF2A1-201ENST00000298173 LINC00167Q96N53 147 aa15.54■□□□□ 0.08
GTF2A1-201ENST00000298173 DNAH8Q96JB1 4490 aa15.53■□□□□ 0.08
GTF2A1-201ENST00000298173 RYR3Q15413 4870 aa15.53■□□□□ 0.08
GTF2A1-201ENST00000298173 GAGE10A6NGK3 116 aa15.52■□□□□ 0.08
GTF2A1-201ENST00000298173 PSMB2P49721 201 aa15.52■□□□□ 0.08
GTF2A1-201ENST00000298173 M0QXV9 152 aa15.51■□□□□ 0.07
GTF2A1-201ENST00000298173 IGLV1-50A0A075B6I6 118 aa15.51■□□□□ 0.07
GTF2A1-201ENST00000298173 A0A087WYN8 130 aa15.51■□□□□ 0.07
GTF2A1-201ENST00000298173 DPH3Q96FX2 82 aa15.51■□□□□ 0.07
GTF2A1-201ENST00000298173 FABP2P12104 132 aa15.5■□□□□ 0.07
GTF2A1-201ENST00000298173 KRTAP10-1P60331 282 aa15.5■□□□□ 0.07
GTF2A1-201ENST00000298173 KCNQ1DNQ9H478 68 aa15.49■□□□□ 0.07
GTF2A1-201ENST00000298173 TRAV23DV6A0A075B6W5 121 aa15.48■□□□□ 0.07
GTF2A1-201ENST00000298173 PLAC8Q9NZF1 115 aa15.48■□□□□ 0.07
GTF2A1-201ENST00000298173 Q6ZSA8 131 aa15.48■□□□□ 0.07
GTF2A1-201ENST00000298173 FAM30AQ9NZY2 134 aa15.48■□□□□ 0.07
GTF2A1-201ENST00000298173 RPL37AP8A6NKH3 93 aa15.47■□□□□ 0.07
GTF2A1-201ENST00000298173 COX6CP09669 75 aa15.47■□□□□ 0.07
GTF2A1-201ENST00000298173 SCGB1C2P0DMR2 95 aa15.46■□□□□ 0.07
GTF2A1-201ENST00000298173 PHF5AQ7RTV0 110 aaKnown RBP15.46■□□□□ 0.07
GTF2A1-201ENST00000298173 CBY1Q9Y3M2 126 aa15.46■□□□□ 0.07
GTF2A1-201ENST00000298173 C6orf99Q4VX62 202 aa15.44■□□□□ 0.06
GTF2A1-201ENST00000298173 ZNF73O43830 326 aaPredicted RBP15.44■□□□□ 0.06
GTF2A1-201ENST00000298173 VAMP3Q15836 100 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms