RNA–Protein interactions for RNA: ENST00000270142.10

SOD1-201, Transcript of superoxide dismutase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOD1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-201ENST00000270142 PMCHL1Q16048 86 aa8.8□□□□□ -1
SOD1-201ENST00000270142 TPRXLQ17RH7 258 aa8.8□□□□□ -1
SOD1-201ENST00000270142 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
SOD1-201ENST00000270142 C3orf22Q8N5N4 141 aa8.8□□□□□ -1
SOD1-201ENST00000270142 PLEKHB2Q96CS7 222 aa8.8□□□□□ -1
SOD1-201ENST00000270142 IGLV7-46A0A075B6I9 117 aa8.79□□□□□ -1
SOD1-201ENST00000270142 C11orf86A6NJI1 115 aa8.79□□□□□ -1
SOD1-201ENST00000270142 LINC00614P0C842 121 aa8.79□□□□□ -1
SOD1-201ENST00000270142 CBLN2Q8IUK8 224 aa8.79□□□□□ -1
SOD1-201ENST00000270142 C18orf32Q8TCD1 76 aa8.79□□□□□ -1
SOD1-201ENST00000270142 CDIP1Q9H305 208 aa8.79□□□□□ -1
SOD1-201ENST00000270142 TMEM170BQ5T4T1 132 aa8.78□□□□□ -1
SOD1-201ENST00000270142 KRTAP9-2Q9BYQ4 174 aa8.78□□□□□ -1
SOD1-201ENST00000270142 RPS10P5Q9NQ39 176 aa8.78□□□□□ -1
SOD1-201ENST00000270142 CTAG1AP78358 180 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 RHEBQ15382 184 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 COMMD7Q86VX2 200 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 BAGE3Q86Y29 109 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 HIGD2AQ9BW72 106 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 TRAPPC1Q9Y5R8 145 aa8.77□□□□□ -1.01
SOD1-201ENST00000270142 C10orf91Q5T1B1 145 aa8.76□□□□□ -1.01
SOD1-201ENST00000270142 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
SOD1-201ENST00000270142 A0A0U1RRA0 63 aa8.74□□□□□ -1.01
SOD1-201ENST00000270142 LINC00158P58513 81 aa8.74□□□□□ -1.01
SOD1-201ENST00000270142 SPRR4Q96PI1 79 aa8.74□□□□□ -1.01
SOD1-201ENST00000270142 PPDPFQ9H3Y8 114 aa8.73□□□□□ -1.01
SOD1-201ENST00000270142 CHTOPQ9Y3Y2 248 aaKnown RBP8.73□□□□□ -1.01
SOD1-201ENST00000270142 SVIPQ8NHG7 77 aa8.72□□□□□ -1.01
SOD1-201ENST00000270142 TMEM223A0PJW6 202 aa8.71□□□□□ -1.02
SOD1-201ENST00000270142 SPAG11AQ6PDA7 123 aa8.7□□□□□ -1.02
SOD1-201ENST00000270142 PRYO14603 147 aa8.69□□□□□ -1.02
SOD1-201ENST00000270142 SMIM13P0DJ93 91 aa8.69□□□□□ -1.02
SOD1-201ENST00000270142 ZNF706Q9Y5V0 76 aaPredicted RBP8.69□□□□□ -1.02
SOD1-201ENST00000270142 TRAV12-1A0A0B4J245 112 aa8.68□□□□□ -1.02
SOD1-201ENST00000270142 NCR3O14931 201 aa8.68□□□□□ -1.02
SOD1-201ENST00000270142 SPRR1AP35321 89 aa8.67□□□□□ -1.02
SOD1-201ENST00000270142 MEIG1Q5JSS6 88 aa8.67□□□□□ -1.02
SOD1-201ENST00000270142 BOD1L2Q8IYS8 172 aa8.67□□□□□ -1.02
SOD1-201ENST00000270142 DAND5Q8N907 189 aa8.67□□□□□ -1.02
SOD1-201ENST00000270142 FP248Q71RG6 208 aaPredicted RBP8.66□□□□□ -1.02
SOD1-201ENST00000270142 MIR7-3HGQ8N6C7 128 aa8.66□□□□□ -1.02
SOD1-201ENST00000270142 LINC00337Q8N6G1 96 aa8.66□□□□□ -1.02
SOD1-201ENST00000270142 Q8NBF4 154 aa8.66□□□□□ -1.02
SOD1-201ENST00000270142 SMCR5Q8TEV8 140 aa8.66□□□□□ -1.02
SOD1-201ENST00000270142 IFI27L1Q96BM0 104 aa8.66□□□□□ -1.02
SOD1-201ENST00000270142 KRTAP4-16G5E9R7 235 aaPredicted RBP8.65□□□□□ -1.02
SOD1-201ENST00000270142 ATP6V1G1O75348 118 aa8.65□□□□□ -1.02
SOD1-201ENST00000270142 KCNQ1DNQ9H478 68 aa8.65□□□□□ -1.02
SOD1-201ENST00000270142 CHCHD1Q96BP2 118 aaKnown RBP8.64□□□□□ -1.03
SOD1-201ENST00000270142 TRBV10-3A0A0K0K1G6 114 aa8.63□□□□□ -1.03
SOD1-201ENST00000270142 ETDCA0A1B0GVM5 59 aa8.63□□□□□ -1.03
SOD1-201ENST00000270142 APOC3P02656 99 aa8.63□□□□□ -1.03
SOD1-201ENST00000270142 HERV-K104P63124 156 aa8.63□□□□□ -1.03
SOD1-201ENST00000270142 KRTAP13-3Q3SY46 172 aa8.63□□□□□ -1.03
SOD1-201ENST00000270142 LINC00483Q53H64 154 aa8.62□□□□□ -1.03
SOD1-201ENST00000270142 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
SOD1-201ENST00000270142 SNAPINO95295 136 aa8.6□□□□□ -1.03
SOD1-201ENST00000270142 SPINK1P00995 79 aa8.6□□□□□ -1.03
SOD1-201ENST00000270142 YPEL4Q96NS1 127 aa8.6□□□□□ -1.03
SOD1-201ENST00000270142 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
SOD1-201ENST00000270142 TSPEAR-AS2P59090 65 aa8.59□□□□□ -1.03
SOD1-201ENST00000270142 GAGE2AQ6NT46 116 aa8.59□□□□□ -1.03
SOD1-201ENST00000270142 SVBPQ8N300 66 aa8.59□□□□□ -1.03
SOD1-201ENST00000270142 FAM19A2Q8N3H0 131 aa8.59□□□□□ -1.03
SOD1-201ENST00000270142 MYMXA0A1B0GTQ4 84 aa8.58□□□□□ -1.04
SOD1-201ENST00000270142 B5MCH6 92 aa8.58□□□□□ -1.04
SOD1-201ENST00000270142 ERC2-IT1O76042 136 aa8.58□□□□□ -1.04
SOD1-201ENST00000270142 ASB16-AS1Q495Z4 193 aa8.58□□□□□ -1.04
SOD1-201ENST00000270142 H0Y8G0 127 aa8.57□□□□□ -1.04
SOD1-201ENST00000270142 HSBP1O75506 76 aa8.57□□□□□ -1.04
SOD1-201ENST00000270142 MOBPQ13875 183 aa8.57□□□□□ -1.04
SOD1-201ENST00000270142 NDUFA5Q16718 116 aa8.57□□□□□ -1.04
SOD1-201ENST00000270142 MAP1LC3CQ9BXW4 147 aa8.57□□□□□ -1.04
SOD1-201ENST00000270142 IGLV9-49A0A0B4J1Y8 123 aa8.56□□□□□ -1.04
SOD1-201ENST00000270142 LCE2BO14633 110 aa8.56□□□□□ -1.04
SOD1-201ENST00000270142 DDTP30046 118 aa8.56□□□□□ -1.04
SOD1-201ENST00000270142 S100A12P80511 92 aa8.56□□□□□ -1.04
SOD1-201ENST00000270142 LOC107984156A0A0G2JMH3 177 aa8.55□□□□□ -1.04
SOD1-201ENST00000270142 KRTAP9-6A0A140TA67 174 aa8.55□□□□□ -1.04
SOD1-201ENST00000270142 ARL17AQ8IVW1 177 aa8.55□□□□□ -1.04
SOD1-201ENST00000270142 Q9BRP9 147 aa8.55□□□□□ -1.04
SOD1-201ENST00000270142 KRTAP4-1Q9BYQ7 146 aa8.55□□□□□ -1.04
SOD1-201ENST00000270142 LEPROTO15243 131 aa8.54□□□□□ -1.04
SOD1-201ENST00000270142 Q8N377 158 aa8.54□□□□□ -1.04
SOD1-201ENST00000270142 TRBV10-2A0A0K0K1G8 114 aa8.53□□□□□ -1.04
SOD1-201ENST00000270142 RPS29P62273 56 aaKnown RBP8.53□□□□□ -1.04
SOD1-201ENST00000270142 SSBP3-AS1Q7Z2R9 100 aa8.53□□□□□ -1.04
SOD1-201ENST00000270142 Q6ZRX8 168 aa8.52□□□□□ -1.05
SOD1-201ENST00000270142 SPANXB1Q9NS25 103 aaPredicted RBP8.52□□□□□ -1.05
SOD1-201ENST00000270142 LEPROTL1O95214 131 aa8.51□□□□□ -1.05
SOD1-201ENST00000270142 GHRHP01286 108 aa8.51□□□□□ -1.05
SOD1-201ENST00000270142 LINC00310P59036 64 aa8.51□□□□□ -1.05
SOD1-201ENST00000270142 SEC61BP60468 96 aaKnown RBP8.51□□□□□ -1.05
SOD1-201ENST00000270142 J3QQQ9 107 aa8.5□□□□□ -1.05
SOD1-201ENST00000270142 IGLV6-57P01721 117 aa8.49□□□□□ -1.05
SOD1-201ENST00000270142 PLNP26678 52 aa8.49□□□□□ -1.05
SOD1-201ENST00000270142 PMCHL2Q9BQD1 86 aa8.49□□□□□ -1.05
SOD1-201ENST00000270142 MIEN1Q9BRT3 115 aa8.49□□□□□ -1.05
SOD1-201ENST00000270142 TRAV23DV6A0A075B6W5 121 aa8.48□□□□□ -1.05
SOD1-201ENST00000270142 SLC25A20O43772 301 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms