RNA–Protein interactions for RNA: ENST00000268704.6

SPG7-201, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPG7, Length 3,076 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-201ENST00000268704 TMEM256-PLSCR3K7ERE1 68 aa11.62□□□□□ -0.55
SPG7-201ENST00000268704 ENHOQ6UWT2 76 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 JMJD7-PLA2G4BH0Y9G9 81 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 S100A7L2Q5SY68 101 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 UNQ6190/PRO20217Q6UXQ8 127 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 NDUFC2O95298 119 aa11.61□□□□□ -0.55
SPG7-201ENST00000268704 C20orf197Q8N268 126 aa11.6□□□□□ -0.55
SPG7-201ENST00000268704 TENM1Q9UKZ4 2725 aa11.6□□□□□ -0.55
SPG7-201ENST00000268704 CYSRT1A8MQ03 144 aa11.59□□□□□ -0.55
SPG7-201ENST00000268704 M0R2N4 97 aa11.59□□□□□ -0.55
SPG7-201ENST00000268704 Q5XG85 94 aa11.59□□□□□ -0.55
SPG7-201ENST00000268704 COX17Q14061 63 aa11.59□□□□□ -0.55
SPG7-201ENST00000268704 SMR3AQ99954 134 aa11.59□□□□□ -0.55
SPG7-201ENST00000268704 GHRHP01286 108 aa11.58□□□□□ -0.56
SPG7-201ENST00000268704 TMEM258P61165 79 aa11.57□□□□□ -0.56
SPG7-201ENST00000268704 IGHV4-28A0A0C4DH34 117 aa11.57□□□□□ -0.56
SPG7-201ENST00000268704 HTN3P15516 51 aa11.57□□□□□ -0.56
SPG7-201ENST00000268704 LINC00575Q6W349 94 aa11.57□□□□□ -0.56
SPG7-201ENST00000268704 CELA1Q9UNI1 258 aa11.57□□□□□ -0.56
SPG7-201ENST00000268704 OTOGQ6ZRI0 2925 aa11.56□□□□□ -0.56
SPG7-201ENST00000268704 SPAG11BQ08648 103 aa11.56□□□□□ -0.56
SPG7-201ENST00000268704 RPS28P62857 69 aaKnown RBP11.55□□□□□ -0.56
SPG7-201ENST00000268704 TRRAPQ9Y4A5 3859 aa11.54□□□□□ -0.56
SPG7-201ENST00000268704 LAMTOR3Q9UHA4 124 aa11.54□□□□□ -0.56
SPG7-201ENST00000268704 HIVEP1P15822 2718 aa11.53□□□□□ -0.56
SPG7-201ENST00000268704 DAD1P61803 113 aa11.53□□□□□ -0.56
SPG7-201ENST00000268704 UBL5Q9BZL1 73 aa11.53□□□□□ -0.56
SPG7-201ENST00000268704 Q6ZQT0 140 aa11.52□□□□□ -0.56
SPG7-201ENST00000268704 LYRM9A8MSI8 78 aa11.52□□□□□ -0.57
SPG7-201ENST00000268704 RBM3P98179 157 aaKnown RBP11.52□□□□□ -0.57
SPG7-201ENST00000268704 XAGE1AQ9HD64 81 aa11.52□□□□□ -0.57
SPG7-201ENST00000268704 KLK12Q9UKR0 248 aa11.52□□□□□ -0.57
SPG7-201ENST00000268704 Q6ZQY7 126 aa11.51□□□□□ -0.57
SPG7-201ENST00000268704 SNURFQ9Y675 71 aa11.51□□□□□ -0.57
SPG7-201ENST00000268704 LYPD5Q6UWN5 251 aa11.5□□□□□ -0.57
SPG7-201ENST00000268704 PKIGQ9Y2B9 76 aa11.5□□□□□ -0.57
SPG7-201ENST00000268704 ATP5EP2Q5VTU8 51 aa11.49□□□□□ -0.57
SPG7-201ENST00000268704 MAST4O15021 2626 aa11.49□□□□□ -0.57
SPG7-201ENST00000268704 ZNF561-AS1K7EIQ3 104 aa11.49□□□□□ -0.57
SPG7-201ENST00000268704 TRBV10-3A0A0K0K1G6 114 aa11.48□□□□□ -0.57
SPG7-201ENST00000268704 LINC00336Q6ZUF6 198 aa11.48□□□□□ -0.57
SPG7-201ENST00000268704 IGLV6-57P01721 117 aa11.48□□□□□ -0.57
SPG7-201ENST00000268704 HAMPP81172 84 aa11.47□□□□□ -0.57
SPG7-201ENST00000268704 C1orf43Q9BWL3 253 aa11.46□□□□□ -0.57
SPG7-201ENST00000268704 PKD1L1Q8TDX9 2849 aa11.46□□□□□ -0.57
SPG7-201ENST00000268704 ATRQ13535 2644 aa11.46□□□□□ -0.58
SPG7-201ENST00000268704 C6orf48Q9UBA6 75 aa11.45□□□□□ -0.58
SPG7-201ENST00000268704 A0A0J9YWU9 116 aa11.44□□□□□ -0.58
SPG7-201ENST00000268704 IGHV4-30-4P0DP06 118 aa11.44□□□□□ -0.58
SPG7-201ENST00000268704 LINC01547P58512 204 aaPredicted RBP11.44□□□□□ -0.58
SPG7-201ENST00000268704 Q8NAQ8 132 aa11.44□□□□□ -0.58
SPG7-201ENST00000268704 Q6ZVQ6 151 aa11.44□□□□□ -0.58
SPG7-201ENST00000268704 LOC110117498A0A087WWA1 95 aa11.43□□□□□ -0.58
SPG7-201ENST00000268704 HIGD2BQ4VC39 106 aa11.42□□□□□ -0.58
SPG7-201ENST00000268704 LELP1Q5T871 98 aa11.42□□□□□ -0.58
SPG7-201ENST00000268704 SCXQ7RTU7 201 aa11.42□□□□□ -0.58
SPG7-201ENST00000268704 WIPF1O43516 503 aa11.42□□□□□ -0.58
SPG7-201ENST00000268704 RMI2Q96E14 147 aa11.42□□□□□ -0.58
SPG7-201ENST00000268704 FAM236DA0A1B0GTK5 79 aa11.41□□□□□ -0.58
SPG7-201ENST00000268704 FAM236CP0DP71 79 aa11.41□□□□□ -0.58
SPG7-201ENST00000268704 PRR34Q9NV39 138 aa11.41□□□□□ -0.58
SPG7-201ENST00000268704 TRAV10A0A0B4J240 114 aa11.41□□□□□ -0.58
SPG7-201ENST00000268704 A0A0U1RQV1 116 aa11.4□□□□□ -0.58
SPG7-201ENST00000268704 DIRC1Q969H9 104 aa11.4□□□□□ -0.58
SPG7-201ENST00000268704 LINC00474Q9P2X8 69 aa11.4□□□□□ -0.58
SPG7-201ENST00000268704 TEP1Q99973 2627 aaKnown RBP11.39□□□□□ -0.59
SPG7-201ENST00000268704 APOC4P55056 127 aa11.39□□□□□ -0.59
SPG7-201ENST00000268704 C9orf66Q5T8R8 295 aa11.39□□□□□ -0.59
SPG7-201ENST00000268704 MUC7Q8TAX7 377 aa11.39□□□□□ -0.59
SPG7-201ENST00000268704 F8P00451 2351 aa11.39□□□□□ -0.59
SPG7-201ENST00000268704 ZNF73O43830 326 aaPredicted RBP11.38□□□□□ -0.59
SPG7-201ENST00000268704 SPART-AS1P0CW21 52 aa11.37□□□□□ -0.59
SPG7-201ENST00000268704 WFDC10BQ8IUB3 73 aa11.36□□□□□ -0.59
SPG7-201ENST00000268704 NSD1Q96L73 2696 aaPredicted RBP11.36□□□□□ -0.59
SPG7-201ENST00000268704 MIFP14174 115 aa11.35□□□□□ -0.59
SPG7-201ENST00000268704 COX7BP24311 80 aa11.35□□□□□ -0.59
SPG7-201ENST00000268704 H7BZZ5 65 aa11.34□□□□□ -0.59
SPG7-201ENST00000268704 GVQW2A0A096LPI5 108 aaPredicted RBP11.34□□□□□ -0.59
SPG7-201ENST00000268704 F8WEM9 126 aa11.34□□□□□ -0.59
SPG7-201ENST00000268704 CAMK2N2Q96S95 79 aa11.34□□□□□ -0.59
SPG7-201ENST00000268704 ELOF1P60002 83 aaKnown RBP11.32□□□□□ -0.6
SPG7-201ENST00000268704 TRBV7-4A0A0J9YYF1 115 aa11.32□□□□□ -0.6
SPG7-201ENST00000268704 VPREB1P12018 145 aa11.32□□□□□ -0.6
SPG7-201ENST00000268704 TRAV7A0A075B6U4 112 aa11.31□□□□□ -0.6
SPG7-201ENST00000268704 Q6ZRU5 148 aa11.31□□□□□ -0.6
SPG7-201ENST00000268704 MPLKIPQ8TAP9 179 aa11.31□□□□□ -0.6
SPG7-201ENST00000268704 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.3□□□□□ -0.6
SPG7-201ENST00000268704 FP248Q71RG6 208 aaPredicted RBP11.3□□□□□ -0.6
SPG7-201ENST00000268704 BRK1Q8WUW1 75 aa11.3□□□□□ -0.6
SPG7-201ENST00000268704 Q8N9L7 120 aa11.29□□□□□ -0.6
SPG7-201ENST00000268704 RETNQ9HD89 108 aa11.29□□□□□ -0.6
SPG7-201ENST00000268704 TM2D3Q9BRN9 247 aa11.29□□□□□ -0.6
SPG7-201ENST00000268704 INAFM1C9JVW0 142 aa11.28□□□□□ -0.6
SPG7-201ENST00000268704 CXCL6P80162 114 aa11.28□□□□□ -0.6
SPG7-201ENST00000268704 PDE6GP18545 87 aa11.28□□□□□ -0.6
SPG7-201ENST00000268704 TENM3Q9P273 2699 aa11.27□□□□□ -0.6
SPG7-201ENST00000268704 NDUFC2-KCTD14E9PQ53 114 aa11.27□□□□□ -0.61
SPG7-201ENST00000268704 C15orf56Q8N910 161 aa11.27□□□□□ -0.61
SPG7-201ENST00000268704 ANK2Q01484 3957 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms