RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 NKAPP1Q8N9T2 125 aa11.22□□□□□ -0.61
PDZRN3-201ENST00000263666 C10orf25Q5T742 122 aa11.22□□□□□ -0.61
PDZRN3-201ENST00000263666 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
PDZRN3-201ENST00000263666 C1orf43Q9BWL3 253 aa11.21□□□□□ -0.61
PDZRN3-201ENST00000263666 SMIM9A6NGZ8 99 aa11.21□□□□□ -0.62
PDZRN3-201ENST00000263666 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
PDZRN3-201ENST00000263666 Q8N814 137 aa11.2□□□□□ -0.62
PDZRN3-201ENST00000263666 PLAC8L1A1L4L8 177 aa11.19□□□□□ -0.62
PDZRN3-201ENST00000263666 COX7CP15954 63 aa11.19□□□□□ -0.62
PDZRN3-201ENST00000263666 C11orf45Q8TAV5 145 aa11.19□□□□□ -0.62
PDZRN3-201ENST00000263666 IMUPQ9GZP8 106 aa11.18□□□□□ -0.62
PDZRN3-201ENST00000263666 TRBV7-7A0A0K0K1E9 115 aa11.18□□□□□ -0.62
PDZRN3-201ENST00000263666 LYRM9A8MSI8 78 aa11.17□□□□□ -0.62
PDZRN3-201ENST00000263666 TRBV10-3A0A0K0K1G6 114 aa11.17□□□□□ -0.62
PDZRN3-201ENST00000263666 SNURFQ9Y675 71 aa11.17□□□□□ -0.62
PDZRN3-201ENST00000263666 MIFP14174 115 aa11.17□□□□□ -0.62
PDZRN3-201ENST00000263666 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
PDZRN3-201ENST00000263666 KIR2DL5BQ8NHK3 375 aa11.15□□□□□ -0.62
PDZRN3-201ENST00000263666 SPATA3Q8NHX4 192 aa11.15□□□□□ -0.62
PDZRN3-201ENST00000263666 KRTAP24-1Q3LI83 254 aa11.15□□□□□ -0.62
PDZRN3-201ENST00000263666 C3orf84H3BNL1 204 aa11.14□□□□□ -0.63
PDZRN3-201ENST00000263666 COX7BP24311 80 aa11.14□□□□□ -0.63
PDZRN3-201ENST00000263666 KRTAP1-1Q07627 177 aa11.14□□□□□ -0.63
PDZRN3-201ENST00000263666 X6R8D5 127 aa11.14□□□□□ -0.63
PDZRN3-201ENST00000263666 J3KT08 172 aa11.13□□□□□ -0.63
PDZRN3-201ENST00000263666 CCKP06307 115 aa11.13□□□□□ -0.63
PDZRN3-201ENST00000263666 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
PDZRN3-201ENST00000263666 SERP2Q8N6R1 65 aa11.13□□□□□ -0.63
PDZRN3-201ENST00000263666 DEFB131BA0A096LNP1 70 aa11.12□□□□□ -0.63
PDZRN3-201ENST00000263666 C19orf73Q9NVV2 129 aa11.12□□□□□ -0.63
PDZRN3-201ENST00000263666 KPRPQ5T749 579 aaPredicted RBP11.12□□□□□ -0.63
PDZRN3-201ENST00000263666 WFDC10BQ8IUB3 73 aa11.12□□□□□ -0.63
PDZRN3-201ENST00000263666 Q6JHZ5 121 aa11.11□□□□□ -0.63
PDZRN3-201ENST00000263666 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
PDZRN3-201ENST00000263666 A0A1B0GUV1 79 aa11.09□□□□□ -0.63
PDZRN3-201ENST00000263666 RPL37AP8A6NKH3 93 aa11.09□□□□□ -0.63
PDZRN3-201ENST00000263666 LELP1Q5T871 98 aa11.08□□□□□ -0.64
PDZRN3-201ENST00000263666 UBE2BP63146 152 aa11.08□□□□□ -0.64
PDZRN3-201ENST00000263666 NREPQ16612 68 aa11.08□□□□□ -0.64
PDZRN3-201ENST00000263666 Q6ZTC4 211 aa11.07□□□□□ -0.64
PDZRN3-201ENST00000263666 Q8N9L7 120 aa11.07□□□□□ -0.64
PDZRN3-201ENST00000263666 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
PDZRN3-201ENST00000263666 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
PDZRN3-201ENST00000263666 IGKV2-24A0A0C4DH68 120 aa11.05□□□□□ -0.64
PDZRN3-201ENST00000263666 A0A0J9YWU9 116 aa11.05□□□□□ -0.64
PDZRN3-201ENST00000263666 KRTAP10-3P60369 221 aa11.05□□□□□ -0.64
PDZRN3-201ENST00000263666 NSD1Q96L73 2696 aaPredicted RBP11.05□□□□□ -0.64
PDZRN3-201ENST00000263666 ETDCA0A1B0GVM5 59 aa11.05□□□□□ -0.64
PDZRN3-201ENST00000263666 VWFP04275 2813 aa11.04□□□□□ -0.64
PDZRN3-201ENST00000263666 LINC00575Q6W349 94 aa11.04□□□□□ -0.64
PDZRN3-201ENST00000263666 COX17Q14061 63 aa11.02□□□□□ -0.64
PDZRN3-201ENST00000263666 RMI2Q96E14 147 aa11.01□□□□□ -0.65
PDZRN3-201ENST00000263666 Q6ZRU5 148 aa11.01□□□□□ -0.65
PDZRN3-201ENST00000263666 A0A096LNI7 61 aa11□□□□□ -0.65
PDZRN3-201ENST00000263666 FAM19A5Q7Z5A7 132 aaPredicted RBP11□□□□□ -0.65
PDZRN3-201ENST00000263666 LYPD5Q6UWN5 251 aa11□□□□□ -0.65
PDZRN3-201ENST00000263666 LINC01561Q8N1V8 128 aa11□□□□□ -0.65
PDZRN3-201ENST00000263666 C6orf48Q9UBA6 75 aa11□□□□□ -0.65
PDZRN3-201ENST00000263666 SYCNQ0VAF6 134 aa10.99□□□□□ -0.65
PDZRN3-201ENST00000263666 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.99□□□□□ -0.65
PDZRN3-201ENST00000263666 FAM19A3Q7Z5A8 133 aa10.99□□□□□ -0.65
PDZRN3-201ENST00000263666 Q6ZVQ6 151 aa10.98□□□□□ -0.65
PDZRN3-201ENST00000263666 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
PDZRN3-201ENST00000263666 M0R2N4 97 aa10.98□□□□□ -0.65
PDZRN3-201ENST00000263666 F8WEM9 126 aa10.97□□□□□ -0.65
PDZRN3-201ENST00000263666 NDUFC2O95298 119 aa10.97□□□□□ -0.65
PDZRN3-201ENST00000263666 BPY2O14599 106 aa10.96□□□□□ -0.65
PDZRN3-201ENST00000263666 NBPF19A0A087WUL8 3843 aa10.96□□□□□ -0.66
PDZRN3-201ENST00000263666 HRCT1Q6UXD1 115 aa10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 FAM236DA0A1B0GTK5 79 aa10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 FAM236CP0DP71 79 aa10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 FUSP35637 526 aaKnown RBP eCLIP10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 LINC01547P58512 204 aaPredicted RBP10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 TRAV10A0A0B4J240 114 aa10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 HIGD2AQ9BW72 106 aa10.95□□□□□ -0.66
PDZRN3-201ENST00000263666 C22orf24Q9Y442 160 aa10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 Q8NDZ9 215 aa10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 TENM1Q9UKZ4 2725 aa10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 PDZD2O15018 2839 aa10.94□□□□□ -0.66
PDZRN3-201ENST00000263666 ATP5EP2Q5VTU8 51 aa10.93□□□□□ -0.66
PDZRN3-201ENST00000263666 PRR4Q16378 134 aa10.93□□□□□ -0.66
PDZRN3-201ENST00000263666 TMEM258P61165 79 aa10.93□□□□□ -0.66
PDZRN3-201ENST00000263666 M0R378 163 aa10.92□□□□□ -0.66
PDZRN3-201ENST00000263666 Q8NAQ8 132 aa10.92□□□□□ -0.66
PDZRN3-201ENST00000263666 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
PDZRN3-201ENST00000263666 CYSTM1Q9H1C7 97 aa10.9□□□□□ -0.66
PDZRN3-201ENST00000263666 PDE6GP18545 87 aa10.89□□□□□ -0.67
PDZRN3-201ENST00000263666 ESRGQ1W209 222 aa10.89□□□□□ -0.67
PDZRN3-201ENST00000263666 DEFB116Q30KQ4 102 aa10.89□□□□□ -0.67
PDZRN3-201ENST00000263666 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
PDZRN3-201ENST00000263666 CRYGAP11844 174 aa10.88□□□□□ -0.67
PDZRN3-201ENST00000263666 Q6ZQT0 140 aa10.88□□□□□ -0.67
PDZRN3-201ENST00000263666 EGFEM1PQ0D2K5 195 aa10.87□□□□□ -0.67
PDZRN3-201ENST00000263666 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
PDZRN3-201ENST00000263666 FAM30AQ9NZY2 134 aa10.86□□□□□ -0.67
PDZRN3-201ENST00000263666 TENM4Q6N022 2769 aa10.86□□□□□ -0.67
PDZRN3-201ENST00000263666 LINC01600Q96MT4 127 aa10.85□□□□□ -0.67
PDZRN3-201ENST00000263666 C4orf26Q17RF5 130 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms