RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
SHANK3-201ENST00000262795 DNAH10OSP0CZ25 163 aa11□□□□□ -0.65
SHANK3-201ENST00000262795 IGIPA6NJ69 53 aa11□□□□□ -0.65
SHANK3-201ENST00000262795 LINC00167Q96N53 147 aa10.99□□□□□ -0.65
SHANK3-201ENST00000262795 PTPRBP23467 1997 aa10.98□□□□□ -0.65
SHANK3-201ENST00000262795 KIAA0087Q14695 138 aa10.98□□□□□ -0.65
SHANK3-201ENST00000262795 Q8N2B8 174 aa10.97□□□□□ -0.65
SHANK3-201ENST00000262795 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
SHANK3-201ENST00000262795 TMEM254Q8TBM7 123 aa10.96□□□□□ -0.65
SHANK3-201ENST00000262795 A0A096LNJ9 63 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 LINC00313P59037 77 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 CXCL6P80162 114 aa10.96□□□□□ -0.66
SHANK3-201ENST00000262795 C8orf87E5RJ46 101 aa10.95□□□□□ -0.66
SHANK3-201ENST00000262795 K7EIL1 84 aa10.95□□□□□ -0.66
SHANK3-201ENST00000262795 C1orf64Q8NEQ6 169 aa10.94□□□□□ -0.66
SHANK3-201ENST00000262795 A0A1B0GUV1 79 aa10.93□□□□□ -0.66
SHANK3-201ENST00000262795 LINC00846Q9NV44 126 aa10.93□□□□□ -0.66
SHANK3-201ENST00000262795 ZNF462Q96JM2 2506 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 EPM2AB3EWF7 344 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 SMIM29Q86T20 159 aa10.92□□□□□ -0.66
SHANK3-201ENST00000262795 KIF25-AS1Q9Y6Z4 181 aa10.91□□□□□ -0.66
SHANK3-201ENST00000262795 PIEZO1Q92508 2521 aa10.91□□□□□ -0.66
SHANK3-201ENST00000262795 FN1P02751 2386 aaKnown RBP10.9□□□□□ -0.66
SHANK3-201ENST00000262795 FAM168BA1KXE4 195 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 F8WDY8 70 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 COL4A2P08572 1712 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 TLN1Q9Y490 2541 aaKnown RBP10.89□□□□□ -0.67
SHANK3-201ENST00000262795 C6orf48Q9UBA6 75 aa10.89□□□□□ -0.67
SHANK3-201ENST00000262795 SMCPP49901 116 aaPredicted RBP10.88□□□□□ -0.67
SHANK3-201ENST00000262795 TM2D3Q9BRN9 247 aa10.87□□□□□ -0.67
SHANK3-201ENST00000262795 WDR87Q6ZQQ6 2873 aa10.87□□□□□ -0.67
SHANK3-201ENST00000262795 MYO9AB2RTY4 2548 aa10.86□□□□□ -0.67
SHANK3-201ENST00000262795 M0R2T5 61 aa10.85□□□□□ -0.67
SHANK3-201ENST00000262795 SPATA3Q8NHX4 192 aa10.85□□□□□ -0.67
SHANK3-201ENST00000262795 ST20-AS1Q8NBB2 130 aa10.84□□□□□ -0.67
SHANK3-201ENST00000262795 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
SHANK3-201ENST00000262795 Q8NAQ8 132 aa10.82□□□□□ -0.68
SHANK3-201ENST00000262795 C2CD3Q4AC94 2353 aa10.82□□□□□ -0.68
SHANK3-201ENST00000262795 C11orf72Q8NBR9 251 aa10.81□□□□□ -0.68
SHANK3-201ENST00000262795 Q8NBF4 154 aa10.81□□□□□ -0.68
SHANK3-201ENST00000262795 ABCA12Q86UK0 2595 aa10.8□□□□□ -0.68
SHANK3-201ENST00000262795 ACYP2P14621 99 aa10.8□□□□□ -0.68
SHANK3-201ENST00000262795 LINC01554Q52M75 96 aa10.79□□□□□ -0.68
SHANK3-201ENST00000262795 LINC00304Q8N9R0 145 aa10.79□□□□□ -0.68
SHANK3-201ENST00000262795 AMELXQ99217 191 aa10.78□□□□□ -0.68
SHANK3-201ENST00000262795 ANAPC11Q9NYG5 84 aa10.78□□□□□ -0.68
SHANK3-201ENST00000262795 BCE1O60756 84 aa10.76□□□□□ -0.69
SHANK3-201ENST00000262795 LINC01561Q8N1V8 128 aa10.76□□□□□ -0.69
SHANK3-201ENST00000262795 OBSCN-AS1Q96MR7 158 aa10.75□□□□□ -0.69
SHANK3-201ENST00000262795 LINC00476Q8WZB0 136 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 CENPFP49454 3210 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 FAM218AQ96MZ4 157 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 APLNQ9ULZ1 77 aa10.74□□□□□ -0.69
SHANK3-201ENST00000262795 KRTAP10-3P60369 221 aa10.73□□□□□ -0.69
SHANK3-201ENST00000262795 DSCR10P59022 87 aa10.73□□□□□ -0.69
SHANK3-201ENST00000262795 PRO0461Q9UI25 63 aa10.72□□□□□ -0.69
SHANK3-201ENST00000262795 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
SHANK3-201ENST00000262795 IGLV5-37A0A075B6J1 123 aa10.71□□□□□ -0.69
SHANK3-201ENST00000262795 IGLV6-57P01721 117 aa10.69□□□□□ -0.7
SHANK3-201ENST00000262795 FAM19A4Q96LR4 140 aa10.69□□□□□ -0.7
SHANK3-201ENST00000262795 H3BNG1 76 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 TLN2Q9Y4G6 2542 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 A8MUN3 132 aa10.68□□□□□ -0.7
SHANK3-201ENST00000262795 A0A087WTM6 91 aa10.66□□□□□ -0.7
SHANK3-201ENST00000262795 LINC00336Q6ZUF6 198 aa10.65□□□□□ -0.7
SHANK3-201ENST00000262795 RBM12B-AS1Q9P1G2 102 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 Q6ZRX8 168 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 CRIPTQ9P021 101 aa10.63□□□□□ -0.71
SHANK3-201ENST00000262795 UTRNP46939 3433 aa10.62□□□□□ -0.71
SHANK3-201ENST00000262795 ANKRD17O75179 2603 aaKnown RBP10.61□□□□□ -0.71
SHANK3-201ENST00000262795 IGHV3OR16-9A0A0B4J2B5 98 aa10.61□□□□□ -0.71
SHANK3-201ENST00000262795 F8P00451 2351 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 PCSK5Q92824 1860 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 LINC01600Q96MT4 127 aa10.6□□□□□ -0.71
SHANK3-201ENST00000262795 WIPF1O43516 503 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 CHD8Q9HCK8 2581 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 C15orf56Q8N910 161 aa10.59□□□□□ -0.71
SHANK3-201ENST00000262795 A0A0G2JQZ4 141 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 A0A1W2PNN7 141 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 SPTBN4Q9H254 2564 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 GVQW2A0A096LPI5 108 aaPredicted RBP10.57□□□□□ -0.72
SHANK3-201ENST00000262795 CD164Q04900 197 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 C10orf142B7Z368 130 aa10.57□□□□□ -0.72
SHANK3-201ENST00000262795 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
SHANK3-201ENST00000262795 RPS28P62857 69 aaKnown RBP10.56□□□□□ -0.72
SHANK3-201ENST00000262795 K7EQZ3 153 aa10.55□□□□□ -0.72
SHANK3-201ENST00000262795 FASNP49327 2511 aaKnown RBP10.54□□□□□ -0.72
SHANK3-201ENST00000262795 CASC10Q5T4H9 136 aa10.54□□□□□ -0.72
SHANK3-201ENST00000262795 C9orf129Q5T035 196 aaKnown RBP10.54□□□□□ -0.72
SHANK3-201ENST00000262795 POLQO75417 2590 aa10.54□□□□□ -0.72
SHANK3-201ENST00000262795 TP53AIP1Q9HCN2 124 aa10.53□□□□□ -0.72
SHANK3-201ENST00000262795 COX8CQ7Z4L0 72 aa10.53□□□□□ -0.72
SHANK3-201ENST00000262795 COA5Q86WW8 74 aa10.52□□□□□ -0.72
SHANK3-201ENST00000262795 H3BS24 57 aa10.52□□□□□ -0.72
SHANK3-201ENST00000262795 ANKRD11Q6UB99 2663 aaPredicted RBP10.51□□□□□ -0.73
SHANK3-201ENST00000262795 TNP2Q05952 138 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 A0A0D9SG42 100 aa10.51□□□□□ -0.73
SHANK3-201ENST00000262795 Q6ZQT0 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms