RNA–Protein interactions for RNA: ENST00000252136.11

TRMT2A-201, Transcript of tRNA methyltransferase 2 homolog A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRMT2A, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT2A-201ENST00000252136 LINC01006Q8NI28 216 aa13.32□□□□□ -0.28
TRMT2A-201ENST00000252136 ITPR3Q14573 2671 aa13.31□□□□□ -0.28
TRMT2A-201ENST00000252136 UNQ6190/PRO20217Q6UXQ8 127 aa13.31□□□□□ -0.28
TRMT2A-201ENST00000252136 F8WEM9 126 aa13.3□□□□□ -0.28
TRMT2A-201ENST00000252136 CMC4P56277 68 aaPredicted RBP13.3□□□□□ -0.28
TRMT2A-201ENST00000252136 SERP1Q9Y6X1 66 aa13.3□□□□□ -0.28
TRMT2A-201ENST00000252136 FLNAP21333 2647 aaKnown RBP13.29□□□□□ -0.28
TRMT2A-201ENST00000252136 REG3AQ06141 175 aa13.29□□□□□ -0.28
TRMT2A-201ENST00000252136 LINC00482Q8N8I6 264 aa13.29□□□□□ -0.28
TRMT2A-201ENST00000252136 LOC110117498A0A087WWA1 95 aa13.29□□□□□ -0.28
TRMT2A-201ENST00000252136 PRO0255Q9UI72 69 aa13.27□□□□□ -0.28
TRMT2A-201ENST00000252136 DEFB4AO15263 64 aa13.27□□□□□ -0.29
TRMT2A-201ENST00000252136 IGLV1-51P01701 117 aa13.27□□□□□ -0.29
TRMT2A-201ENST00000252136 WFDC11Q8NEX6 87 aa13.27□□□□□ -0.29
TRMT2A-201ENST00000252136 TM2D3Q9BRN9 247 aa13.26□□□□□ -0.29
TRMT2A-201ENST00000252136 LINC00336Q6ZUF6 198 aa13.25□□□□□ -0.29
TRMT2A-201ENST00000252136 KLKP1Q107X0 134 aa13.25□□□□□ -0.29
TRMT2A-201ENST00000252136 IGHV4-28A0A0C4DH34 117 aa13.24□□□□□ -0.29
TRMT2A-201ENST00000252136 SPAG11BQ08648 103 aa13.24□□□□□ -0.29
TRMT2A-201ENST00000252136 XAGE1AQ9HD64 81 aa13.24□□□□□ -0.29
TRMT2A-201ENST00000252136 PRB1P04280 392 aa13.23□□□□□ -0.29
TRMT2A-201ENST00000252136 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
TRMT2A-201ENST00000252136 CYSRT1A8MQ03 144 aa13.22□□□□□ -0.29
TRMT2A-201ENST00000252136 DEFB113Q30KQ7 82 aa13.2□□□□□ -0.3
TRMT2A-201ENST00000252136 HIVEP2P31629 2446 aa13.2□□□□□ -0.3
TRMT2A-201ENST00000252136 BCE1O60756 84 aa13.2□□□□□ -0.3
TRMT2A-201ENST00000252136 CXCL6P80162 114 aa13.2□□□□□ -0.3
TRMT2A-201ENST00000252136 IGLV6-57P01721 117 aa13.19□□□□□ -0.3
TRMT2A-201ENST00000252136 Q8N9L7 120 aa13.18□□□□□ -0.3
TRMT2A-201ENST00000252136 LINC00474Q9P2X8 69 aa13.18□□□□□ -0.3
TRMT2A-201ENST00000252136 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
TRMT2A-201ENST00000252136 PDE6GP18545 87 aa13.17□□□□□ -0.3
TRMT2A-201ENST00000252136 FP248Q71RG6 208 aaPredicted RBP13.17□□□□□ -0.3
TRMT2A-201ENST00000252136 DIRC1Q969H9 104 aa13.17□□□□□ -0.3
TRMT2A-201ENST00000252136 MRAPQ8TCY5 172 aa13.16□□□□□ -0.3
TRMT2A-201ENST00000252136 SMIM26A0A096LP01 95 aa13.15□□□□□ -0.3
TRMT2A-201ENST00000252136 C9orf66Q5T8R8 295 aa13.15□□□□□ -0.3
TRMT2A-201ENST00000252136 LINC00612Q8N6U2 182 aa13.15□□□□□ -0.3
TRMT2A-201ENST00000252136 X6R8D5 127 aa13.15□□□□□ -0.3
TRMT2A-201ENST00000252136 HTN3P15516 51 aa13.15□□□□□ -0.3
TRMT2A-201ENST00000252136 MIFP14174 115 aa13.14□□□□□ -0.31
TRMT2A-201ENST00000252136 C1orf43Q9BWL3 253 aa13.14□□□□□ -0.31
TRMT2A-201ENST00000252136 TRBV7-6A0A0J9YX20 115 aa13.14□□□□□ -0.31
TRMT2A-201ENST00000252136 NREPQ16612 68 aa13.14□□□□□ -0.31
TRMT2A-201ENST00000252136 KLK12Q9UKR0 248 aa13.14□□□□□ -0.31
TRMT2A-201ENST00000252136 PRO0628Q9UI54 55 aa13.13□□□□□ -0.31
TRMT2A-201ENST00000252136 ZNF73O43830 326 aaPredicted RBP13.13□□□□□ -0.31
TRMT2A-201ENST00000252136 COX7BP24311 80 aa13.12□□□□□ -0.31
TRMT2A-201ENST00000252136 BPY2O14599 106 aa13.12□□□□□ -0.31
TRMT2A-201ENST00000252136 TRBV7-4A0A0J9YYF1 115 aa13.11□□□□□ -0.31
TRMT2A-201ENST00000252136 TMEM254Q8TBM7 123 aa13.1□□□□□ -0.31
TRMT2A-201ENST00000252136 DEFB135Q30KP9 77 aa13.1□□□□□ -0.31
TRMT2A-201ENST00000252136 C16orf95Q9H693 158 aa13.1□□□□□ -0.31
TRMT2A-201ENST00000252136 A0A0J9YWU9 116 aa13.09□□□□□ -0.31
TRMT2A-201ENST00000252136 IGHV4-30-4P0DP06 118 aa13.09□□□□□ -0.31
TRMT2A-201ENST00000252136 PKIGQ9Y2B9 76 aa13.09□□□□□ -0.31
TRMT2A-201ENST00000252136 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.09□□□□□ -0.31
TRMT2A-201ENST00000252136 VWFP04275 2813 aa13.09□□□□□ -0.31
TRMT2A-201ENST00000252136 C6orf48Q9UBA6 75 aa13.08□□□□□ -0.31
TRMT2A-201ENST00000252136 NDUFC1O43677 76 aa13.07□□□□□ -0.32
TRMT2A-201ENST00000252136 DAD1P61803 113 aa13.07□□□□□ -0.32
TRMT2A-201ENST00000252136 MPLKIPQ8TAP9 179 aa13.07□□□□□ -0.32
TRMT2A-201ENST00000252136 HIGD2BQ4VC39 106 aa13.05□□□□□ -0.32
TRMT2A-201ENST00000252136 H3BQ85 93 aa13.05□□□□□ -0.32
TRMT2A-201ENST00000252136 KRTAP1-3Q8IUG1 177 aa13.05□□□□□ -0.32
TRMT2A-201ENST00000252136 BRK1Q8WUW1 75 aa13.04□□□□□ -0.32
TRMT2A-201ENST00000252136 C3orf84H3BNL1 204 aa13.04□□□□□ -0.32
TRMT2A-201ENST00000252136 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
TRMT2A-201ENST00000252136 LYRM9A8MSI8 78 aa13.02□□□□□ -0.32
TRMT2A-201ENST00000252136 FAM229BQ4G0N7 80 aa13.02□□□□□ -0.33
TRMT2A-201ENST00000252136 CELA1Q9UNI1 258 aa13.02□□□□□ -0.33
TRMT2A-201ENST00000252136 DEFB105AQ8NG35 78 aa13□□□□□ -0.33
TRMT2A-201ENST00000252136 UBR5O95071 2799 aaPredicted RBP13□□□□□ -0.33
TRMT2A-201ENST00000252136 A0A0U1RQV1 116 aa12.99□□□□□ -0.33
TRMT2A-201ENST00000252136 CAMK2N2Q96S95 79 aa12.99□□□□□ -0.33
TRMT2A-201ENST00000252136 UNC79Q9P2D8 2635 aa12.98□□□□□ -0.33
TRMT2A-201ENST00000252136 IGKV4-1P06312 121 aa12.98□□□□□ -0.33
TRMT2A-201ENST00000252136 ATP5EP56381 51 aaPredicted RBP12.97□□□□□ -0.33
TRMT2A-201ENST00000252136 LELP1Q5T871 98 aa12.97□□□□□ -0.33
TRMT2A-201ENST00000252136 HIGD2AQ9BW72 106 aa12.96□□□□□ -0.33
TRMT2A-201ENST00000252136 PRYO14603 147 aa12.96□□□□□ -0.33
TRMT2A-201ENST00000252136 VPREB1P12018 145 aa12.96□□□□□ -0.33
TRMT2A-201ENST00000252136 GVQW2A0A096LPI5 108 aaPredicted RBP12.95□□□□□ -0.34
TRMT2A-201ENST00000252136 PRR34Q9NV39 138 aa12.95□□□□□ -0.34
TRMT2A-201ENST00000252136 FUSP35637 526 aaKnown RBP eCLIP12.94□□□□□ -0.347e-7■■■□□ 15.3
TRMT2A-201ENST00000252136 USP24Q9UPU5 2620 aa12.94□□□□□ -0.34
TRMT2A-201ENST00000252136 OCR1Q9BZK8 76 aa12.93□□□□□ -0.34
TRMT2A-201ENST00000252136 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
TRMT2A-201ENST00000252136 M0R378 163 aa12.92□□□□□ -0.34
TRMT2A-201ENST00000252136 Q6ZRU5 148 aa12.91□□□□□ -0.34
TRMT2A-201ENST00000252136 FAM30AQ9NZY2 134 aa12.9□□□□□ -0.34
TRMT2A-201ENST00000252136 ERC2-IT1O76042 136 aa12.9□□□□□ -0.35
TRMT2A-201ENST00000252136 KRTAP10-3P60369 221 aa12.89□□□□□ -0.35
TRMT2A-201ENST00000252136 LRCOL1A6NCL2 159 aa12.88□□□□□ -0.35
TRMT2A-201ENST00000252136 ITPR2Q14571 2701 aa12.88□□□□□ -0.35
TRMT2A-201ENST00000252136 ESRGQ1W209 222 aa12.87□□□□□ -0.35
TRMT2A-201ENST00000252136 SPART-AS1P0CW21 52 aa12.87□□□□□ -0.35
TRMT2A-201ENST00000252136 SMIM29Q86T20 159 aa12.86□□□□□ -0.35
TRMT2A-201ENST00000252136 HIVEP1P15822 2718 aa12.85□□□□□ -0.35
TRMT2A-201ENST00000252136 WFDC10BQ8IUB3 73 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 130.4 ms