RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 FAM240AA0A1B0GVK7 77 aa14.46□□□□□ -0.1
CLN6-201ENST00000249806 ZNF561-AS1K7EIQ3 104 aa14.46□□□□□ -0.1
CLN6-201ENST00000249806 HUWE1Q7Z6Z7 4374 aaKnown RBP14.45□□□□□ -0.1
CLN6-201ENST00000249806 S100A7L2Q5SY68 101 aa14.45□□□□□ -0.1
CLN6-201ENST00000249806 XAGE1AQ9HD64 81 aa14.45□□□□□ -0.1
CLN6-201ENST00000249806 SNCGO76070 127 aa14.44□□□□□ -0.1
CLN6-201ENST00000249806 LINC01556Q5JQF7 62 aa14.44□□□□□ -0.1
CLN6-201ENST00000249806 MUC7Q8TAX7 377 aa14.43□□□□□ -0.1
CLN6-201ENST00000249806 MGAM2Q2M2H8 2515 aa14.43□□□□□ -0.1
CLN6-201ENST00000249806 K7EIL1 84 aa14.43□□□□□ -0.1
CLN6-201ENST00000249806 C15orf56Q8N910 161 aa14.43□□□□□ -0.1
CLN6-201ENST00000249806 CAMK2N2Q96S95 79 aa14.43□□□□□ -0.1
CLN6-201ENST00000249806 C6orf99Q4VX62 202 aa14.42□□□□□ -0.1
CLN6-201ENST00000249806 TTC32Q5I0X7 151 aa14.42□□□□□ -0.1
CLN6-201ENST00000249806 RPL18AQ02543 176 aaKnown RBP14.42□□□□□ -0.1
CLN6-201ENST00000249806 C1orf43Q9BWL3 253 aa14.42□□□□□ -0.1
CLN6-201ENST00000249806 TM2D3Q9BRN9 247 aa14.41□□□□□ -0.1
CLN6-201ENST00000249806 IGKV2D-24A0A075B6R9 120 aa14.41□□□□□ -0.1
CLN6-201ENST00000249806 Q6ZRU5 148 aa14.39□□□□□ -0.11
CLN6-201ENST00000249806 Q8N814 137 aa14.39□□□□□ -0.11
CLN6-201ENST00000249806 TRAV10A0A0B4J240 114 aa14.38□□□□□ -0.11
CLN6-201ENST00000249806 INAFM2P0DMQ5 153 aa14.38□□□□□ -0.11
CLN6-201ENST00000249806 ORMDL1Q9P0S3 153 aa14.38□□□□□ -0.11
CLN6-201ENST00000249806 IGLV6-57P01721 117 aa14.36□□□□□ -0.11
CLN6-201ENST00000249806 ACYP1P07311 99 aa14.36□□□□□ -0.11
CLN6-201ENST00000249806 C14orf132Q9NPU4 83 aa14.36□□□□□ -0.11
CLN6-201ENST00000249806 A0A1B0GV72 72 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 DNAH10OSP0CZ25 163 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 GAGE2BQ13066 116 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 GAGE2EQ4V326 116 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 LINC00167Q96N53 147 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 GAGE2DQ9UEU5 116 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 GAGE2AQ6NT46 116 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 LINC00588Q9Y4M8 146 aa14.35□□□□□ -0.11
CLN6-201ENST00000249806 A0A1B0GX51 115 aa14.34□□□□□ -0.11
CLN6-201ENST00000249806 SMCR5Q8TEV8 140 aa14.34□□□□□ -0.11
CLN6-201ENST00000249806 OBSCN-AS1Q96MR7 158 aa14.34□□□□□ -0.11
CLN6-201ENST00000249806 TRBV10-3A0A0K0K1G6 114 aa14.33□□□□□ -0.12
CLN6-201ENST00000249806 C2orf48Q96LS8 159 aa14.32□□□□□ -0.12
CLN6-201ENST00000249806 LINC00575Q6W349 94 aa14.31□□□□□ -0.12
CLN6-201ENST00000249806 NDUFC2-KCTD14E9PQ53 114 aa14.29□□□□□ -0.12
CLN6-201ENST00000249806 COL7A1Q02388 2944 aa14.28□□□□□ -0.12
CLN6-201ENST00000249806 VPREB1P12018 145 aa14.27□□□□□ -0.12
CLN6-201ENST00000249806 Q6ZRP5 223 aa14.27□□□□□ -0.12
CLN6-201ENST00000249806 TMEM256-PLSCR3K7ERE1 68 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 Q6Q795 121 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 DNAH1Q9P2D7 4330 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 TRAV23DV6A0A075B6W5 121 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 SYCNQ0VAF6 134 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 SDIM1Q6ZPB5 146 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 LYSTQ99698 3801 aa14.26□□□□□ -0.13
CLN6-201ENST00000249806 hADV29S1A0JD25 119 aa14.25□□□□□ -0.13
CLN6-201ENST00000249806 CASC10Q5T4H9 136 aa14.24□□□□□ -0.13
CLN6-201ENST00000249806 STAB2Q8WWQ8 2551 aa14.24□□□□□ -0.13
CLN6-201ENST00000249806 LINC00643Q86TS7 51 aa14.22□□□□□ -0.13
CLN6-201ENST00000249806 DIRC1Q969H9 104 aa14.22□□□□□ -0.13
CLN6-201ENST00000249806 ZNF73O43830 326 aaPredicted RBP14.21□□□□□ -0.13
CLN6-201ENST00000249806 TRBV7-7A0A0K0K1E9 115 aa14.21□□□□□ -0.14
CLN6-201ENST00000249806 NDUFV3P56181 108 aaKnown RBP14.2□□□□□ -0.14
CLN6-201ENST00000249806 ANAPC13Q9BS18 74 aa14.2□□□□□ -0.14
CLN6-201ENST00000249806 M0R378 163 aa14.19□□□□□ -0.14
CLN6-201ENST00000249806 MDFIQ99750 246 aa14.19□□□□□ -0.14
CLN6-201ENST00000249806 F8WDY8 70 aa14.18□□□□□ -0.14
CLN6-201ENST00000249806 JMJD7-PLA2G4BH0Y9G9 81 aa14.18□□□□□ -0.14
CLN6-201ENST00000249806 LINC00846Q9NV44 126 aa14.18□□□□□ -0.14
CLN6-201ENST00000249806 Q6ZQY7 126 aa14.18□□□□□ -0.14
CLN6-201ENST00000249806 USP17L23D6RBM5 183 aa14.17□□□□□ -0.14
CLN6-201ENST00000249806 NHLRC4P0CG21 123 aaPredicted RBP14.17□□□□□ -0.14
CLN6-201ENST00000249806 DNAH9Q9NYC9 4486 aa14.17□□□□□ -0.14
CLN6-201ENST00000249806 CCKP06307 115 aa14.15□□□□□ -0.14
CLN6-201ENST00000249806 COX7BP24311 80 aa14.15□□□□□ -0.14
CLN6-201ENST00000249806 ELOF1P60002 83 aaKnown RBP14.14□□□□□ -0.15
CLN6-201ENST00000249806 UPK3BQ9BT76 320 aa14.13□□□□□ -0.15
CLN6-201ENST00000249806 SERTAD4-AS1Q5TG53 156 aa14.13□□□□□ -0.15
CLN6-201ENST00000249806 IMUPQ9GZP8 106 aa14.11□□□□□ -0.15
CLN6-201ENST00000249806 LAMTOR3Q9UHA4 124 aa14.11□□□□□ -0.15
CLN6-201ENST00000249806 DNAH10Q8IVF4 4471 aa14.09□□□□□ -0.15
CLN6-201ENST00000249806 RMI2Q96E14 147 aa14.09□□□□□ -0.15
CLN6-201ENST00000249806 TRBV7-6A0A0J9YX20 115 aa14.09□□□□□ -0.15
CLN6-201ENST00000249806 RBM3P98179 157 aaKnown RBP14.09□□□□□ -0.15
CLN6-201ENST00000249806 TLX1NBP0CAT3 122 aa14.08□□□□□ -0.16
CLN6-201ENST00000249806 NKAPP1Q8N9T2 125 aa14.07□□□□□ -0.16
CLN6-201ENST00000249806 CSMD3Q7Z407 3707 aa14.07□□□□□ -0.16
CLN6-201ENST00000249806 FAM168BA1KXE4 195 aa14.06□□□□□ -0.16
CLN6-201ENST00000249806 LINC00528Q8N1L1 170 aa14.06□□□□□ -0.16
CLN6-201ENST00000249806 C7orf33Q8WU49 177 aa14.06□□□□□ -0.16
CLN6-201ENST00000249806 KRTAP1-5Q9BYS1 174 aa14.06□□□□□ -0.16
CLN6-201ENST00000249806 TENM2Q9NT68 2774 aa14.05□□□□□ -0.16
CLN6-201ENST00000249806 IGKV3D-7A0A0C4DH55 119 aa14.05□□□□□ -0.16
CLN6-201ENST00000249806 FAM236AA0A1B0GUQ0 79 aa14.05□□□□□ -0.16
CLN6-201ENST00000249806 FAM236BA0A1B0GV22 79 aa14.05□□□□□ -0.16
CLN6-201ENST00000249806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.05□□□□□ -0.16
CLN6-201ENST00000249806 DNAH7Q8WXX0 4024 aa14.04□□□□□ -0.16
CLN6-201ENST00000249806 Q6ZQT0 140 aa14.03□□□□□ -0.16
CLN6-201ENST00000249806 KCNQ1DNQ9H478 68 aa14.02□□□□□ -0.16
CLN6-201ENST00000249806 RPL37AP8A6NKH3 93 aa14□□□□□ -0.17
CLN6-201ENST00000249806 M0R2N4 97 aa14□□□□□ -0.17
CLN6-201ENST00000249806 Q6JHZ5 121 aa14□□□□□ -0.17
CLN6-201ENST00000249806 KRTAP7-1Q8IUC3 87 aa14□□□□□ -0.17
CLN6-201ENST00000249806 APLNQ9ULZ1 77 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms