RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
SLIRP-201ENST00000238688 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
SLIRP-201ENST00000238688 PFN2P35080 140 aa8.73□□□□□ -1.01
SLIRP-201ENST00000238688 C14orf177Q52M58 125 aa8.73□□□□□ -1.01
SLIRP-201ENST00000238688 SOSTDC1Q6X4U4 206 aa8.73□□□□□ -1.01
SLIRP-201ENST00000238688 Q1RN00 199 aa8.72□□□□□ -1.01
SLIRP-201ENST00000238688 PKIGQ9Y2B9 76 aa8.72□□□□□ -1.01
SLIRP-201ENST00000238688 A0A0U1RRA0 63 aa8.71□□□□□ -1.02
SLIRP-201ENST00000238688 UNQ6190/PRO20217Q6UXQ8 127 aa8.71□□□□□ -1.02
SLIRP-201ENST00000238688 Q9HAA7 133 aa8.71□□□□□ -1.02
SLIRP-201ENST00000238688 CBY1Q9Y3M2 126 aa8.71□□□□□ -1.02
SLIRP-201ENST00000238688 TRBV10-2A0A0K0K1G8 114 aa8.7□□□□□ -1.02
SLIRP-201ENST00000238688 TLX1NBP0CAT3 122 aa8.7□□□□□ -1.02
SLIRP-201ENST00000238688 RPL13AP40429 203 aaKnown RBP8.7□□□□□ -1.02
SLIRP-201ENST00000238688 SYCNQ0VAF6 134 aa8.7□□□□□ -1.02
SLIRP-201ENST00000238688 NDUFC2-KCTD14E9PQ53 114 aa8.69□□□□□ -1.02
SLIRP-201ENST00000238688 EIF4EBP3O60516 100 aaPredicted RBP8.69□□□□□ -1.02
SLIRP-201ENST00000238688 PSMB2P49721 201 aa8.69□□□□□ -1.02
SLIRP-201ENST00000238688 NPC2P61916 151 aa8.69□□□□□ -1.02
SLIRP-201ENST00000238688 C6orf48Q9UBA6 75 aa8.69□□□□□ -1.02
SLIRP-201ENST00000238688 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SLIRP-201ENST00000238688 USP17L23D6RBM5 183 aa8.68□□□□□ -1.02
SLIRP-201ENST00000238688 F8W1H4 67 aa8.68□□□□□ -1.02
SLIRP-201ENST00000238688 SCGB1C2P0DMR2 95 aa8.68□□□□□ -1.02
SLIRP-201ENST00000238688 RYR1P21817 5038 aa8.68□□□□□ -1.02
SLIRP-201ENST00000238688 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
SLIRP-201ENST00000238688 C10orf25Q5T742 122 aa8.67□□□□□ -1.02
SLIRP-201ENST00000238688 C6orf223Q8N319 242 aa8.67□□□□□ -1.02
SLIRP-201ENST00000238688 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
SLIRP-201ENST00000238688 TMEM126AQ9H061 195 aa8.67□□□□□ -1.02
SLIRP-201ENST00000238688 PCLOQ9Y6V0 5065 aa8.66□□□□□ -1.02
SLIRP-201ENST00000238688 M0QXV9 152 aa8.66□□□□□ -1.02
SLIRP-201ENST00000238688 ATXN8Q156A1 80 aa8.66□□□□□ -1.02
SLIRP-201ENST00000238688 HIGD2BQ4VC39 106 aa8.66□□□□□ -1.02
SLIRP-201ENST00000238688 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
SLIRP-201ENST00000238688 IGKV2-28A0A075B6P5 120 aa8.65□□□□□ -1.02
SLIRP-201ENST00000238688 PSCAO43653 123 aa8.65□□□□□ -1.02
SLIRP-201ENST00000238688 IGKV2D-28P01615 120 aa8.65□□□□□ -1.02
SLIRP-201ENST00000238688 Q6ZRU5 148 aa8.65□□□□□ -1.02
SLIRP-201ENST00000238688 H0YGX0 51 aa8.64□□□□□ -1.03
SLIRP-201ENST00000238688 TRIAP1O43715 76 aa8.64□□□□□ -1.03
SLIRP-201ENST00000238688 CNBPP62633 177 aaKnown RBP8.64□□□□□ -1.03
SLIRP-201ENST00000238688 C1orf134Q5TEV5 83 aa8.64□□□□□ -1.03
SLIRP-201ENST00000238688 LINC00337Q8N6G1 96 aa8.64□□□□□ -1.03
SLIRP-201ENST00000238688 LRP1BQ9NZR2 4599 aa8.63□□□□□ -1.03
SLIRP-201ENST00000238688 H7C2G1 150 aa8.63□□□□□ -1.03
SLIRP-201ENST00000238688 C9orf116Q5BN46 136 aaPredicted RBP8.63□□□□□ -1.03
SLIRP-201ENST00000238688 LINC01600Q96MT4 127 aa8.63□□□□□ -1.03
SLIRP-201ENST00000238688 PLA2G2DQ9UNK4 145 aa8.63□□□□□ -1.03
SLIRP-201ENST00000238688 TNP2Q05952 138 aa8.62□□□□□ -1.03
SLIRP-201ENST00000238688 LINC00526Q96FQ7 95 aa8.62□□□□□ -1.03
SLIRP-201ENST00000238688 KRTAP1-5Q9BYS1 174 aa8.62□□□□□ -1.03
SLIRP-201ENST00000238688 A0A1B0GX51 115 aa8.61□□□□□ -1.03
SLIRP-201ENST00000238688 TCL1BO95988 128 aa8.61□□□□□ -1.03
SLIRP-201ENST00000238688 HSPG2P98160 4391 aa8.61□□□□□ -1.03
SLIRP-201ENST00000238688 LOC107984640A0A0U1RRK4 108 aa8.6□□□□□ -1.03
SLIRP-201ENST00000238688 H3BMG7 143 aa8.6□□□□□ -1.03
SLIRP-201ENST00000238688 LST1O00453 97 aa8.6□□□□□ -1.03
SLIRP-201ENST00000238688 SNCGO76070 127 aa8.6□□□□□ -1.03
SLIRP-201ENST00000238688 TRACP01848 142 aa8.6□□□□□ -1.03
SLIRP-201ENST00000238688 DNAH5Q8TE73 4624 aa8.59□□□□□ -1.03
SLIRP-201ENST00000238688 S100A7L2Q5SY68 101 aa8.59□□□□□ -1.03
SLIRP-201ENST00000238688 M0R378 163 aa8.58□□□□□ -1.04
SLIRP-201ENST00000238688 IGLV6-57P01721 117 aa8.58□□□□□ -1.04
SLIRP-201ENST00000238688 OR13C6PQ8NH95 151 aa8.58□□□□□ -1.04
SLIRP-201ENST00000238688 ABCA13Q86UQ4 5058 aa8.58□□□□□ -1.04
SLIRP-201ENST00000238688 IGLV5-37A0A075B6J1 123 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 TRBV7-6A0A0J9YX20 115 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 H3BT86 120 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 LINC01620Q4KN68 170 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 Q6ZRN7 208 aaPredicted RBP8.57□□□□□ -1.04
SLIRP-201ENST00000238688 SMIM11BQ8TCY0 68 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 PRO0461Q9UI25 63 aa8.57□□□□□ -1.04
SLIRP-201ENST00000238688 VPREB1P12018 145 aa8.56□□□□□ -1.04
SLIRP-201ENST00000238688 Q6ZRP5 223 aa8.56□□□□□ -1.04
SLIRP-201ENST00000238688 KRTAP4-5Q9BYR2 181 aa8.56□□□□□ -1.04
SLIRP-201ENST00000238688 APOBP04114 4563 aaKnown RBP8.56□□□□□ -1.04
SLIRP-201ENST00000238688 H3BQ85 93 aa8.54□□□□□ -1.04
SLIRP-201ENST00000238688 SLPIP03973 132 aa8.54□□□□□ -1.04
SLIRP-201ENST00000238688 LINC00474Q9P2X8 69 aa8.54□□□□□ -1.04
SLIRP-201ENST00000238688 LRCOL1A6NCL2 159 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 J3QR89 54 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 K7ERU9 68 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 SLC25A20O43772 301 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 RPL18AQ02543 176 aaKnown RBP8.53□□□□□ -1.04
SLIRP-201ENST00000238688 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 XAGE1AQ9HD64 81 aa8.53□□□□□ -1.04
SLIRP-201ENST00000238688 NCR3O14931 201 aa8.52□□□□□ -1.05
SLIRP-201ENST00000238688 DNAL4O96015 105 aa8.52□□□□□ -1.05
SLIRP-201ENST00000238688 GHRHP01286 108 aa8.52□□□□□ -1.05
SLIRP-201ENST00000238688 GAGE2EQ4V326 116 aa8.52□□□□□ -1.05
SLIRP-201ENST00000238688 GAGE2DQ9UEU5 116 aa8.52□□□□□ -1.05
SLIRP-201ENST00000238688 C9JAW5 83 aa8.51□□□□□ -1.05
SLIRP-201ENST00000238688 C9orf129Q5T035 196 aaKnown RBP8.51□□□□□ -1.05
SLIRP-201ENST00000238688 TEN1Q86WV5 123 aa8.51□□□□□ -1.05
SLIRP-201ENST00000238688 ANKRD29Q8N6D5 301 aa8.51□□□□□ -1.05
SLIRP-201ENST00000238688 C9orf163Q8N9P6 203 aa8.51□□□□□ -1.05
SLIRP-201ENST00000238688 TRAV23DV6A0A075B6W5 121 aa8.5□□□□□ -1.05
SLIRP-201ENST00000238688 KRTAP10-2P60368 255 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms