RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 USP17L23D6RBM5 183 aa6.46□□□□□ -1.38
TTC1-201ENST00000231238 CFC1BP0CG36 223 aa6.46□□□□□ -1.38
TTC1-201ENST00000231238 CFC1P0CG37 223 aa6.46□□□□□ -1.38
TTC1-201ENST00000231238 C15orf56Q8N910 161 aa6.46□□□□□ -1.38
TTC1-201ENST00000231238 C2orf48Q96LS8 159 aa6.46□□□□□ -1.38
TTC1-201ENST00000231238 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.38
TTC1-201ENST00000231238 FBN3Q75N90 2809 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 GVQW2A0A096LPI5 108 aaPredicted RBP6.45□□□□□ -1.38
TTC1-201ENST00000231238 A0A0B4J2C4 111 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 TRBV30A0A0K0K1B3 111 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 F8WDY8 70 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 LECT2O14960 151 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 FABP2P12104 132 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 PSMB2P49721 201 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 SYCNQ0VAF6 134 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 C9orf116Q5BN46 136 aaPredicted RBP6.45□□□□□ -1.38
TTC1-201ENST00000231238 C10orf25Q5T742 122 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 SND1-IT1Q9HBX3 110 aa6.45□□□□□ -1.38
TTC1-201ENST00000231238 LOC107984156A0A0G2JMH3 177 aa6.44□□□□□ -1.38
TTC1-201ENST00000231238 A0A1B0GWB2 263 aa6.44□□□□□ -1.38
TTC1-201ENST00000231238 M0R2N4 97 aa6.44□□□□□ -1.38
TTC1-201ENST00000231238 LYRM7Q5U5X0 104 aa6.44□□□□□ -1.38
TTC1-201ENST00000231238 ARL17AQ8IVW1 177 aa6.44□□□□□ -1.38
TTC1-201ENST00000231238 TRIAP1O43715 76 aa6.43□□□□□ -1.38
TTC1-201ENST00000231238 LY6G6CO95867 125 aa6.43□□□□□ -1.38
TTC1-201ENST00000231238 SCGB1C2P0DMR2 95 aa6.43□□□□□ -1.38
TTC1-201ENST00000231238 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
TTC1-201ENST00000231238 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
TTC1-201ENST00000231238 KRTAP1-5Q9BYS1 174 aa6.43□□□□□ -1.38
TTC1-201ENST00000231238 A0A1W2PPM0 123 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 C14orf177Q52M58 125 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 CASC10Q5T4H9 136 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 Q6ZRU5 148 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 OR13C6PQ8NH95 151 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
TTC1-201ENST00000231238 TRAV13-2A0A0B4J235 113 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 C3orf84H3BNL1 204 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 TSPAN13O95857 204 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 GTF2H5Q6ZYL4 71 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 PPDPFQ9H3Y8 114 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 GAGE10A6NGK3 116 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 COX6CP09669 75 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 KRTAP5-3Q6L8H2 238 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 SPCS1Q9Y6A9 102 aa6.41□□□□□ -1.38
TTC1-201ENST00000231238 RPL18AQ02543 176 aaKnown RBP6.4□□□□□ -1.39
TTC1-201ENST00000231238 GAGE2EQ4V326 116 aa6.4□□□□□ -1.39
TTC1-201ENST00000231238 GAGE2DQ9UEU5 116 aa6.4□□□□□ -1.39
TTC1-201ENST00000231238 NDUFC2-KCTD14E9PQ53 114 aa6.39□□□□□ -1.39
TTC1-201ENST00000231238 XAGE1AQ9HD64 81 aa6.39□□□□□ -1.39
TTC1-201ENST00000231238 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
TTC1-201ENST00000231238 DYNC2H1Q8NCM8 4307 aaKnown RBP6.38□□□□□ -1.39
TTC1-201ENST00000231238 S100A7L2Q5SY68 101 aa6.38□□□□□ -1.39
TTC1-201ENST00000231238 TGP01266 2768 aa6.38□□□□□ -1.39
TTC1-201ENST00000231238 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.37□□□□□ -1.39
TTC1-201ENST00000231238 K7EP34 96 aa6.37□□□□□ -1.39
TTC1-201ENST00000231238 NCR3O14931 201 aa6.37□□□□□ -1.39
TTC1-201ENST00000231238 NDUFC2O95298 119 aa6.37□□□□□ -1.39
TTC1-201ENST00000231238 DNAH7Q8WXX0 4024 aa6.36□□□□□ -1.39
TTC1-201ENST00000231238 UBE2V1Q13404 147 aa6.36□□□□□ -1.39
TTC1-201ENST00000231238 LOC107984640A0A0U1RRK4 108 aa6.35□□□□□ -1.39
TTC1-201ENST00000231238 GAGE2BQ13066 116 aa6.35□□□□□ -1.39
TTC1-201ENST00000231238 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
TTC1-201ENST00000231238 TRBV20-1A0A075B6N2 111 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 IGKV2-28A0A075B6P5 120 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 IGKV2D-28P01615 120 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 PRR3P79522 188 aaKnown RBP6.34□□□□□ -1.39
TTC1-201ENST00000231238 WFDC2Q14508 124 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 LINC00337Q8N6G1 96 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 NKAPP1Q8N9T2 125 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 PKIGQ9Y2B9 76 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 CSMD3Q7Z407 3707 aa6.34□□□□□ -1.39
TTC1-201ENST00000231238 Q6ZRP5 223 aa6.34□□□□□ -1.4
TTC1-201ENST00000231238 TMEM126AQ9H061 195 aa6.34□□□□□ -1.4
TTC1-201ENST00000231238 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
TTC1-201ENST00000231238 H3BMG7 143 aa6.32□□□□□ -1.4
TTC1-201ENST00000231238 TLX1NBP0CAT3 122 aa6.32□□□□□ -1.4
TTC1-201ENST00000231238 CNBPP62633 177 aaKnown RBP6.32□□□□□ -1.4
TTC1-201ENST00000231238 Q6ZR54 194 aa6.32□□□□□ -1.4
TTC1-201ENST00000231238 CBY1Q9Y3M2 126 aa6.32□□□□□ -1.4
TTC1-201ENST00000231238 PLECQ15149 4684 aaKnown RBP6.32□□□□□ -1.4
TTC1-201ENST00000231238 TRBV10-2A0A0K0K1G8 114 aa6.31□□□□□ -1.4
TTC1-201ENST00000231238 M0R378 163 aa6.31□□□□□ -1.4
TTC1-201ENST00000231238 Q6ZRN7 208 aaPredicted RBP6.31□□□□□ -1.4
TTC1-201ENST00000231238 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
TTC1-201ENST00000231238 IGKV2-24A0A0C4DH68 120 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 LRCOL1A6NCL2 159 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 SNCGO76070 127 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 TCL1BO95988 128 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 RPL28P46779 137 aaKnown RBP6.3□□□□□ -1.4
TTC1-201ENST00000231238 Q8N814 137 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 STARD9Q9P2P6 4700 aa6.3□□□□□ -1.4
TTC1-201ENST00000231238 A0A087WTM6 91 aa6.29□□□□□ -1.4
TTC1-201ENST00000231238 VPREB1P12018 145 aa6.29□□□□□ -1.4
TTC1-201ENST00000231238 CLEC2BQ92478 149 aa6.29□□□□□ -1.4
TTC1-201ENST00000231238 DPH3Q96FX2 82 aa6.29□□□□□ -1.4
TTC1-201ENST00000231238 H0YGX0 51 aa6.28□□□□□ -1.4
TTC1-201ENST00000231238 C9orf129Q5T035 196 aaKnown RBP6.28□□□□□ -1.4
TTC1-201ENST00000231238 FAM19A5Q7Z5A7 132 aaPredicted RBP6.28□□□□□ -1.4
TTC1-201ENST00000231238 Q8NDZ9 215 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms