RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 H3BNG1 76 aa9.09□□□□□ -0.96
COL1A1-201ENST00000225964 LINC00476Q8WZB0 136 aa9.08□□□□□ -0.96
COL1A1-201ENST00000225964 LINC00588Q9Y4M8 146 aa9.08□□□□□ -0.96
COL1A1-201ENST00000225964 IGLV5-39A0A0G2JS06 123 aa9.08□□□□□ -0.96
COL1A1-201ENST00000225964 WWC2-AS2Q96NR7 200 aa9.08□□□□□ -0.96
COL1A1-201ENST00000225964 IGHV3OR16-9A0A0B4J2B5 98 aa9.07□□□□□ -0.96
COL1A1-201ENST00000225964 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
COL1A1-201ENST00000225964 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
COL1A1-201ENST00000225964 NAV3Q8IVL0 2385 aa9.06□□□□□ -0.96
COL1A1-201ENST00000225964 IGLV8-61A0A075B6I0 122 aa9.05□□□□□ -0.96
COL1A1-201ENST00000225964 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
COL1A1-201ENST00000225964 PTPRBP23467 1997 aa9.05□□□□□ -0.96
COL1A1-201ENST00000225964 FAM19A4Q96LR4 140 aa9.05□□□□□ -0.96
COL1A1-201ENST00000225964 COX6B2Q6YFQ2 88 aa9.04□□□□□ -0.96
COL1A1-201ENST00000225964 Q6ZRX8 168 aa9.04□□□□□ -0.96
COL1A1-201ENST00000225964 BCE1O60756 84 aa9.03□□□□□ -0.96
COL1A1-201ENST00000225964 NCOR2Q9Y618 2525 aa9.01□□□□□ -0.97
COL1A1-201ENST00000225964 Q8NAQ8 132 aa9.01□□□□□ -0.97
COL1A1-201ENST00000225964 LINC01546A6NGU7 62 aa9.01□□□□□ -0.97
COL1A1-201ENST00000225964 FAM218AQ96MZ4 157 aa8.99□□□□□ -0.97
COL1A1-201ENST00000225964 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
COL1A1-201ENST00000225964 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
COL1A1-201ENST00000225964 ABCA2Q9BZC7 2435 aa8.98□□□□□ -0.97
COL1A1-201ENST00000225964 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
COL1A1-201ENST00000225964 GVQW2A0A096LPI5 108 aaPredicted RBP8.97□□□□□ -0.97
COL1A1-201ENST00000225964 Q6ZQT0 140 aa8.97□□□□□ -0.97
COL1A1-201ENST00000225964 CACNA1AO00555 2505 aa8.97□□□□□ -0.97
COL1A1-201ENST00000225964 PIEZO1Q92508 2521 aa8.97□□□□□ -0.97
COL1A1-201ENST00000225964 SPINT4Q6UDR6 99 aa8.95□□□□□ -0.98
COL1A1-201ENST00000225964 IGLV5-45A0A087WSX0 123 aa8.94□□□□□ -0.98
COL1A1-201ENST00000225964 C9orf92A6NGG3 77 aa8.93□□□□□ -0.98
COL1A1-201ENST00000225964 A0A1B0GW54 56 aa8.92□□□□□ -0.98
COL1A1-201ENST00000225964 DNAH10OSP0CZ25 163 aa8.92□□□□□ -0.98
COL1A1-201ENST00000225964 LOC110117498A0A087WWA1 95 aa8.91□□□□□ -0.98
COL1A1-201ENST00000225964 C8orf87E5RJ46 101 aa8.91□□□□□ -0.98
COL1A1-201ENST00000225964 H3BPC8 53 aa8.91□□□□□ -0.98
COL1A1-201ENST00000225964 CDIP1Q9H305 208 aa8.91□□□□□ -0.98
COL1A1-201ENST00000225964 DOPEY1Q5JWR5 2465 aa8.91□□□□□ -0.98
COL1A1-201ENST00000225964 DSCR10P59022 87 aa8.9□□□□□ -0.99
COL1A1-201ENST00000225964 KRTAP10-11P60412 298 aa8.89□□□□□ -0.99
COL1A1-201ENST00000225964 LINC00304Q8N9R0 145 aa8.88□□□□□ -0.99
COL1A1-201ENST00000225964 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
COL1A1-201ENST00000225964 A8MWP4 228 aa8.88□□□□□ -0.99
COL1A1-201ENST00000225964 SMR3BP02814 79 aaPredicted RBP8.87□□□□□ -0.99
COL1A1-201ENST00000225964 MRPL34Q9BQ48 92 aaKnown RBP8.87□□□□□ -0.99
COL1A1-201ENST00000225964 NAV2Q8IVL1 2488 aa8.87□□□□□ -0.99
COL1A1-201ENST00000225964 LOC101927531A0A1B0GV80 90 aa8.86□□□□□ -0.99
COL1A1-201ENST00000225964 TM2D3Q9BRN9 247 aa8.86□□□□□ -0.99
COL1A1-201ENST00000225964 K7EIL1 84 aa8.86□□□□□ -0.99
COL1A1-201ENST00000225964 MYO18BQ8IUG5 2567 aa8.85□□□□□ -0.99
COL1A1-201ENST00000225964 IGF2RP11717 2491 aa8.85□□□□□ -0.99
COL1A1-201ENST00000225964 PCSK5Q92824 1860 aa8.85□□□□□ -0.99
COL1A1-201ENST00000225964 TRBV7-4A0A0J9YYF1 115 aa8.85□□□□□ -0.99
COL1A1-201ENST00000225964 VPREB1P12018 145 aa8.84□□□□□ -0.99
COL1A1-201ENST00000225964 SSBP3-AS1Q7Z2R9 100 aa8.84□□□□□ -0.99
COL1A1-201ENST00000225964 OBSCN-AS1Q96MR7 158 aa8.84□□□□□ -0.99
COL1A1-201ENST00000225964 SMCPP49901 116 aaPredicted RBP8.83□□□□□ -1
COL1A1-201ENST00000225964 K7EQZ3 153 aa8.83□□□□□ -1
COL1A1-201ENST00000225964 IGLV1-50A0A075B6I6 118 aa8.83□□□□□ -1
COL1A1-201ENST00000225964 C4orf26Q17RF5 130 aa8.82□□□□□ -1
COL1A1-201ENST00000225964 IGLV6-57P01721 117 aa8.82□□□□□ -1
COL1A1-201ENST00000225964 LINC01600Q96MT4 127 aa8.81□□□□□ -1
COL1A1-201ENST00000225964 ZNF462Q96JM2 2506 aa8.8□□□□□ -1
COL1A1-201ENST00000225964 COA5Q86WW8 74 aa8.78□□□□□ -1
COL1A1-201ENST00000225964 PRO0628Q9UI54 55 aa8.78□□□□□ -1
COL1A1-201ENST00000225964 IGLV5-37A0A075B6J1 123 aa8.77□□□□□ -1
COL1A1-201ENST00000225964 IGFL1Q6UW32 110 aa8.77□□□□□ -1.01
COL1A1-201ENST00000225964 ZNF861PO60384 105 aa8.77□□□□□ -1.01
COL1A1-201ENST00000225964 A0A087WTM6 91 aa8.76□□□□□ -1.01
COL1A1-201ENST00000225964 JMJD1CQ15652 2540 aa8.76□□□□□ -1.01
COL1A1-201ENST00000225964 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
COL1A1-201ENST00000225964 CSNK1G2-AS1Q8NCQ2 148 aa8.75□□□□□ -1.01
COL1A1-201ENST00000225964 C8orf17Q9NRJ1 99 aa8.75□□□□□ -1.01
COL1A1-201ENST00000225964 KCNQ1DNQ9H478 68 aa8.75□□□□□ -1.01
COL1A1-201ENST00000225964 ANAPC11Q9NYG5 84 aa8.75□□□□□ -1.01
COL1A1-201ENST00000225964 C15orf56Q8N910 161 aa8.74□□□□□ -1.01
COL1A1-201ENST00000225964 CHD8Q9HCK8 2581 aa8.74□□□□□ -1.01
COL1A1-201ENST00000225964 PIEZO2Q9H5I5 2752 aa8.74□□□□□ -1.01
COL1A1-201ENST00000225964 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
COL1A1-201ENST00000225964 C19orf73Q9NVV2 129 aa8.73□□□□□ -1.01
COL1A1-201ENST00000225964 LRRK2Q5S007 2527 aa8.73□□□□□ -1.01
COL1A1-201ENST00000225964 CRIPTQ9P021 101 aa8.73□□□□□ -1.01
COL1A1-201ENST00000225964 ZFYVE26Q68DK2 2539 aa8.72□□□□□ -1.01
COL1A1-201ENST00000225964 PRO0461Q9UI25 63 aa8.72□□□□□ -1.01
COL1A1-201ENST00000225964 A0A1B0GVX0 72 aa8.72□□□□□ -1.01
COL1A1-201ENST00000225964 LINC01554Q52M75 96 aa8.71□□□□□ -1.01
COL1A1-201ENST00000225964 A0A0G2JQZ4 141 aa8.71□□□□□ -1.02
COL1A1-201ENST00000225964 A0A1W2PNN7 141 aa8.71□□□□□ -1.02
COL1A1-201ENST00000225964 C9orf129Q5T035 196 aaKnown RBP8.71□□□□□ -1.02
COL1A1-201ENST00000225964 LITAFQ99732 161 aa8.71□□□□□ -1.02
COL1A1-201ENST00000225964 LINC00336Q6ZUF6 198 aa8.69□□□□□ -1.02
COL1A1-201ENST00000225964 UQCR11O14957 56 aa8.69□□□□□ -1.02
COL1A1-201ENST00000225964 IGLV7-43P04211 117 aa8.69□□□□□ -1.02
COL1A1-201ENST00000225964 PRR15Q8IV56 129 aa8.67□□□□□ -1.02
COL1A1-201ENST00000225964 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
COL1A1-201ENST00000225964 MIR22HGQ0VDD5 57 aa8.67□□□□□ -1.02
COL1A1-201ENST00000225964 A8MUN3 132 aa8.65□□□□□ -1.02
COL1A1-201ENST00000225964 A0A0D9SG42 100 aa8.64□□□□□ -1.03
COL1A1-201ENST00000225964 Q8N377 158 aa8.64□□□□□ -1.03
COL1A1-201ENST00000225964 PSORS1C2Q9UIG4 136 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms