RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 RPL18AQ02543 176 aaKnown RBP9.58□□□□□ -0.88
RPA3-201ENST00000223129 GAGE2BQ13066 116 aa9.58□□□□□ -0.88
RPA3-201ENST00000223129 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
RPA3-201ENST00000223129 HERVK_113P61574 105 aa9.57□□□□□ -0.88
RPA3-201ENST00000223129 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
RPA3-201ENST00000223129 RYR1P21817 5038 aa9.57□□□□□ -0.88
RPA3-201ENST00000223129 LEPROTO15243 131 aa9.56□□□□□ -0.88
RPA3-201ENST00000223129 Q6ZRP5 223 aa9.56□□□□□ -0.88
RPA3-201ENST00000223129 DPH3Q96FX2 82 aa9.56□□□□□ -0.88
RPA3-201ENST00000223129 NHP2Q9NX24 153 aaKnown RBP9.56□□□□□ -0.88
RPA3-201ENST00000223129 E9PLD3 99 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 HSPG2P98160 4391 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 K7ERJ3 54 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 CDK2AP2O75956 126 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 TLX1NBP0CAT3 122 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 GAGE2EQ4V326 116 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 SPACA4Q8TDM5 124 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 GAGE2DQ9UEU5 116 aa9.55□□□□□ -0.88
RPA3-201ENST00000223129 NDUFC2-KCTD14E9PQ53 114 aa9.54□□□□□ -0.88
RPA3-201ENST00000223129 J3QQQ9 107 aa9.54□□□□□ -0.88
RPA3-201ENST00000223129 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
RPA3-201ENST00000223129 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
RPA3-201ENST00000223129 CIRBP-AS1Q8TBR5 109 aa9.54□□□□□ -0.88
RPA3-201ENST00000223129 PLEKHB2Q96CS7 222 aa9.54□□□□□ -0.88
RPA3-201ENST00000223129 MYMXA0A1B0GTQ4 84 aa9.53□□□□□ -0.88
RPA3-201ENST00000223129 HIST1H4GQ99525 98 aa9.53□□□□□ -0.88
RPA3-201ENST00000223129 NDUFA12Q9UI09 145 aa9.53□□□□□ -0.88
RPA3-201ENST00000223129 PKIGQ9Y2B9 76 aa9.53□□□□□ -0.88
RPA3-201ENST00000223129 PFN2P35080 140 aa9.53□□□□□ -0.88
RPA3-201ENST00000223129 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
RPA3-201ENST00000223129 A0A087WYN8 130 aa9.51□□□□□ -0.89
RPA3-201ENST00000223129 A0A1B0GWB2 263 aa9.51□□□□□ -0.89
RPA3-201ENST00000223129 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
RPA3-201ENST00000223129 SFTA2Q6UW10 78 aa9.51□□□□□ -0.89
RPA3-201ENST00000223129 ERG28Q9UKR5 140 aa9.51□□□□□ -0.89
RPA3-201ENST00000223129 A0A0U1RRA0 63 aa9.5□□□□□ -0.89
RPA3-201ENST00000223129 F8W1H4 67 aa9.5□□□□□ -0.89
RPA3-201ENST00000223129 XAGE1AQ9HD64 81 aa9.5□□□□□ -0.89
RPA3-201ENST00000223129 LINC00474Q9P2X8 69 aa9.5□□□□□ -0.89
RPA3-201ENST00000223129 SMR3BP02814 79 aaPredicted RBP9.49□□□□□ -0.89
RPA3-201ENST00000223129 A0A1W2PNN7 141 aa9.49□□□□□ -0.89
RPA3-201ENST00000223129 RPL24P83731 157 aaKnown RBP9.49□□□□□ -0.89
RPA3-201ENST00000223129 C9orf129Q5T035 196 aaKnown RBP9.49□□□□□ -0.89
RPA3-201ENST00000223129 FAM168BA1KXE4 195 aa9.48□□□□□ -0.89
RPA3-201ENST00000223129 HERV-K104P63124 156 aa9.48□□□□□ -0.89
RPA3-201ENST00000223129 MEIG1Q5JSS6 88 aa9.48□□□□□ -0.89
RPA3-201ENST00000223129 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
RPA3-201ENST00000223129 LINC00158P58513 81 aa9.47□□□□□ -0.89
RPA3-201ENST00000223129 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
RPA3-201ENST00000223129 FAT1Q14517 4588 aa9.47□□□□□ -0.89
RPA3-201ENST00000223129 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.89
RPA3-201ENST00000223129 A6NJY4 79 aa9.46□□□□□ -0.89
RPA3-201ENST00000223129 COX17Q14061 63 aa9.46□□□□□ -0.89
RPA3-201ENST00000223129 ZNF815PA8K554 130 aa9.46□□□□□ -0.9
RPA3-201ENST00000223129 J3QR89 54 aa9.45□□□□□ -0.9
RPA3-201ENST00000223129 SPANXB1Q9NS25 103 aaPredicted RBP9.45□□□□□ -0.9
RPA3-201ENST00000223129 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
RPA3-201ENST00000223129 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
RPA3-201ENST00000223129 H3BMG7 143 aa9.44□□□□□ -0.9
RPA3-201ENST00000223129 FAM19A5Q7Z5A7 132 aaPredicted RBP9.44□□□□□ -0.9
RPA3-201ENST00000223129 SND1-IT1Q9HBX3 110 aa9.44□□□□□ -0.9
RPA3-201ENST00000223129 HERC2O95714 4834 aa9.44□□□□□ -0.9
RPA3-201ENST00000223129 SCGB1D4Q6XE38 83 aa9.43□□□□□ -0.9
RPA3-201ENST00000223129 SERTAD4-AS1Q5TG53 156 aa9.43□□□□□ -0.9
RPA3-201ENST00000223129 MIR7-3HGQ8N6C7 128 aa9.43□□□□□ -0.9
RPA3-201ENST00000223129 DAND5Q8N907 189 aa9.43□□□□□ -0.9
RPA3-201ENST00000223129 PRO0461Q9UI25 63 aa9.42□□□□□ -0.9
RPA3-201ENST00000223129 EPM2AB3EWF7 344 aa9.41□□□□□ -0.9
RPA3-201ENST00000223129 TMEM238C9JI98 176 aa9.41□□□□□ -0.9
RPA3-201ENST00000223129 SRSF9Q13242 221 aaKnown RBP eCLIP9.41□□□□□ -0.9
RPA3-201ENST00000223129 PHF5AQ7RTV0 110 aaKnown RBP9.41□□□□□ -0.9
RPA3-201ENST00000223129 ADAMTSL4-AS1Q5T5F5 129 aa9.4□□□□□ -0.9
RPA3-201ENST00000223129 LINC00528Q8N1L1 170 aa9.4□□□□□ -0.9
RPA3-201ENST00000223129 SCGB1A1P11684 91 aa9.39□□□□□ -0.91
RPA3-201ENST00000223129 ETDBQ3ZM63 59 aa9.39□□□□□ -0.91
RPA3-201ENST00000223129 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
RPA3-201ENST00000223129 SIGMAR1Q99720 223 aa9.39□□□□□ -0.91
RPA3-201ENST00000223129 Q8N1X5 172 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 Q8NDZ9 215 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 VPS13BQ7Z7G8 4022 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 M0QXV9 152 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 LITAFQ99732 161 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 C22orf24Q9Y442 160 aa9.38□□□□□ -0.91
RPA3-201ENST00000223129 TSPAN13O95857 204 aa9.37□□□□□ -0.91
RPA3-201ENST00000223129 NPC2P61916 151 aa9.37□□□□□ -0.91
RPA3-201ENST00000223129 PLA2G2DQ9UNK4 145 aa9.36□□□□□ -0.91
RPA3-201ENST00000223129 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
RPA3-201ENST00000223129 Q5VSD8 79 aa9.36□□□□□ -0.91
RPA3-201ENST00000223129 EIF4EBP3O60516 100 aaPredicted RBP9.35□□□□□ -0.91
RPA3-201ENST00000223129 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
RPA3-201ENST00000223129 TIMM17BO60830 172 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 VPREB1P12018 145 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 KRTAP11-1Q8IUC1 163 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 KRTAP4-5Q9BYR2 181 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 LOC107984156A0A0G2JMH3 177 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 SOSTDC1Q6X4U4 206 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 ARL17AQ8IVW1 177 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 MTURNQ8N3F0 131 aa9.34□□□□□ -0.91
RPA3-201ENST00000223129 TRBV20-1A0A075B6N2 111 aa9.33□□□□□ -0.92
RPA3-201ENST00000223129 PSMB2P49721 201 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms