RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 CIRBPQ14011 172 aaKnown RBP10.4□□□□□ -0.74
LIM2-201ENST00000221973 C9orf129Q5T035 196 aaKnown RBP10.4□□□□□ -0.74
LIM2-201ENST00000221973 SCGB1D4Q6XE38 83 aa10.4□□□□□ -0.74
LIM2-201ENST00000221973 MIR7-3HGQ8N6C7 128 aa10.4□□□□□ -0.74
LIM2-201ENST00000221973 SND1-IT1Q9HBX3 110 aa10.4□□□□□ -0.74
LIM2-201ENST00000221973 COX8AP10176 69 aa10.39□□□□□ -0.75
LIM2-201ENST00000221973 DAND5Q8N907 189 aa10.39□□□□□ -0.75
LIM2-201ENST00000221973 C14orf144Q96I85 54 aa10.39□□□□□ -0.75
LIM2-201ENST00000221973 TP73-AS1Q9UF72 201 aa10.39□□□□□ -0.75
LIM2-201ENST00000221973 A0A087WYN8 130 aa10.38□□□□□ -0.75
LIM2-201ENST00000221973 S100A12P80511 92 aa10.38□□□□□ -0.75
LIM2-201ENST00000221973 LRP1Q07954 4544 aaKnown RBP10.38□□□□□ -0.75
LIM2-201ENST00000221973 FAM168BA1KXE4 195 aa10.37□□□□□ -0.75
LIM2-201ENST00000221973 SMIM6P0DI80 62 aa10.37□□□□□ -0.75
LIM2-201ENST00000221973 ADAMTSL4-AS1Q5T5F5 129 aa10.37□□□□□ -0.75
LIM2-201ENST00000221973 SCXQ7RTU7 201 aa10.37□□□□□ -0.75
LIM2-201ENST00000221973 CIRBP-AS1Q8TBR5 109 aa10.37□□□□□ -0.75
LIM2-201ENST00000221973 A0A1W2PNN7 141 aa10.36□□□□□ -0.75
LIM2-201ENST00000221973 TIMM17BO60830 172 aa10.36□□□□□ -0.75
LIM2-201ENST00000221973 BOD1L2Q8IYS8 172 aa10.36□□□□□ -0.75
LIM2-201ENST00000221973 LITAFQ99732 161 aa10.36□□□□□ -0.75
LIM2-201ENST00000221973 FAM19A5Q7Z5A7 132 aaPredicted RBP10.35□□□□□ -0.75
LIM2-201ENST00000221973 NPC2P61916 151 aa10.34□□□□□ -0.75
LIM2-201ENST00000221973 PLAC8Q9NZF1 115 aa10.34□□□□□ -0.75
LIM2-201ENST00000221973 TMEM238C9JI98 176 aa10.33□□□□□ -0.76
LIM2-201ENST00000221973 DLEU1O43261 78 aa10.33□□□□□ -0.76
LIM2-201ENST00000221973 SERTAD4-AS1Q5TG53 156 aa10.33□□□□□ -0.76
LIM2-201ENST00000221973 SLC25A34Q6PIV7 304 aa10.33□□□□□ -0.76
LIM2-201ENST00000221973 KRTAP7-1Q8IUC3 87 aa10.33□□□□□ -0.76
LIM2-201ENST00000221973 FAT3Q8TDW7 4589 aa10.31□□□□□ -0.76
LIM2-201ENST00000221973 MIEN1Q9BRT3 115 aa10.31□□□□□ -0.76
LIM2-201ENST00000221973 EIF4EBP3O60516 100 aaPredicted RBP10.3□□□□□ -0.76
LIM2-201ENST00000221973 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
LIM2-201ENST00000221973 SOSTDC1Q6X4U4 206 aa10.3□□□□□ -0.76
LIM2-201ENST00000221973 LINC00528Q8N1L1 170 aa10.3□□□□□ -0.76
LIM2-201ENST00000221973 SPANXDQ9BXN6 97 aa10.3□□□□□ -0.76
LIM2-201ENST00000221973 SPANXCQ9NY87 97 aa10.3□□□□□ -0.76
LIM2-201ENST00000221973 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
LIM2-201ENST00000221973 M0QXV9 152 aa10.29□□□□□ -0.76
LIM2-201ENST00000221973 Q8NDZ9 215 aa10.29□□□□□ -0.76
LIM2-201ENST00000221973 LINC00308Q8TCZ7 52 aa10.29□□□□□ -0.76
LIM2-201ENST00000221973 C12orf57Q99622 126 aa10.29□□□□□ -0.76
LIM2-201ENST00000221973 HMCN2Q8NDA2 5059 aa10.29□□□□□ -0.76
LIM2-201ENST00000221973 VPREB1P12018 145 aa10.28□□□□□ -0.76
LIM2-201ENST00000221973 RPL24P83731 157 aaKnown RBP10.28□□□□□ -0.76
LIM2-201ENST00000221973 SRSF9Q13242 221 aaKnown RBP eCLIP10.28□□□□□ -0.76
LIM2-201ENST00000221973 PHF5AQ7RTV0 110 aaKnown RBP10.28□□□□□ -0.76
LIM2-201ENST00000221973 C22orf24Q9Y442 160 aa10.28□□□□□ -0.76
LIM2-201ENST00000221973 LOC107984156A0A0G2JMH3 177 aa10.27□□□□□ -0.77
LIM2-201ENST00000221973 KRTAP29-1A8MX34 341 aaPredicted RBP10.27□□□□□ -0.77
LIM2-201ENST00000221973 PLA2G1BP04054 148 aaKnown RBP10.27□□□□□ -0.77
LIM2-201ENST00000221973 ARL17AQ8IVW1 177 aa10.27□□□□□ -0.77
LIM2-201ENST00000221973 NKAPP1Q8N9T2 125 aa10.27□□□□□ -0.77
LIM2-201ENST00000221973 PRO1933Q9H354 126 aa10.27□□□□□ -0.77
LIM2-201ENST00000221973 SPANXB1Q9NS25 103 aaPredicted RBP10.27□□□□□ -0.77
LIM2-201ENST00000221973 PRR3P79522 188 aaKnown RBP10.26□□□□□ -0.77
LIM2-201ENST00000221973 C2orf91Q6ZV80 131 aa10.26□□□□□ -0.77
LIM2-201ENST00000221973 Q6ZVH6 145 aa10.26□□□□□ -0.77
LIM2-201ENST00000221973 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 J3QL48 77 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 IFITM1P13164 125 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 MUSTN1Q8IVN3 82 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 HIGD1BQ9P298 99 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 UQCR10Q9UDW1 63 aa10.25□□□□□ -0.77
LIM2-201ENST00000221973 GAGE10A6NGK3 116 aa10.24□□□□□ -0.77
LIM2-201ENST00000221973 NCR3O14931 201 aa10.24□□□□□ -0.77
LIM2-201ENST00000221973 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
LIM2-201ENST00000221973 HIST1H4GQ99525 98 aa10.24□□□□□ -0.77
LIM2-201ENST00000221973 LBHQ53QV2 105 aaPredicted RBP10.23□□□□□ -0.77
LIM2-201ENST00000221973 LINC00518Q8N0U6 118 aa10.23□□□□□ -0.77
LIM2-201ENST00000221973 COPS9Q8WXC6 57 aa10.23□□□□□ -0.77
LIM2-201ENST00000221973 PKHD1L1Q86WI1 4243 aa10.23□□□□□ -0.77
LIM2-201ENST00000221973 NDUFC2O95298 119 aa10.22□□□□□ -0.77
LIM2-201ENST00000221973 UBE2BP63146 152 aa10.22□□□□□ -0.77
LIM2-201ENST00000221973 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
LIM2-201ENST00000221973 LINC00167Q96N53 147 aa10.22□□□□□ -0.77
LIM2-201ENST00000221973 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
LIM2-201ENST00000221973 M0R378 163 aa10.21□□□□□ -0.77
LIM2-201ENST00000221973 KRTAP11-1Q8IUC1 163 aa10.2□□□□□ -0.78
LIM2-201ENST00000221973 HNRNPA3P51991 378 aaKnown RBP10.19□□□□□ -0.78
LIM2-201ENST00000221973 PPDPFQ9H3Y8 114 aa10.19□□□□□ -0.78
LIM2-201ENST00000221973 IGKV2-28A0A075B6P5 120 aa10.17□□□□□ -0.78
LIM2-201ENST00000221973 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
LIM2-201ENST00000221973 IGKV2D-28P01615 120 aa10.17□□□□□ -0.78
LIM2-201ENST00000221973 A4D1N5 150 aa10.16□□□□□ -0.78
LIM2-201ENST00000221973 TSTD3H0UI37 97 aa10.16□□□□□ -0.78
LIM2-201ENST00000221973 TAL2Q16559 108 aa10.16□□□□□ -0.78
LIM2-201ENST00000221973 UBR4Q5T4S7 5183 aa10.15□□□□□ -0.78
LIM2-201ENST00000221973 IGLV1-50A0A075B6I6 118 aa10.15□□□□□ -0.78
LIM2-201ENST00000221973 RPL37AP61513 92 aaKnown RBP10.15□□□□□ -0.78
LIM2-201ENST00000221973 S100A7L2Q5SY68 101 aa10.15□□□□□ -0.78
LIM2-201ENST00000221973 CEND1Q8N111 149 aa10.15□□□□□ -0.78
LIM2-201ENST00000221973 PSORS1C2Q9UIG4 136 aa10.15□□□□□ -0.78
LIM2-201ENST00000221973 TRBV10-3A0A0K0K1G6 114 aa10.14□□□□□ -0.79
LIM2-201ENST00000221973 DDTP30046 118 aa10.14□□□□□ -0.79
LIM2-201ENST00000221973 HSD52Q0P140 79 aa10.14□□□□□ -0.79
LIM2-201ENST00000221973 OR13C6PQ8NH95 151 aa10.14□□□□□ -0.79
LIM2-201ENST00000221973 LINC00337Q8N6G1 96 aa10.13□□□□□ -0.79
LIM2-201ENST00000221973 OXTP01178 125 aa10.12□□□□□ -0.79
LIM2-201ENST00000221973 A6NDN8 102 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms