RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 BAGE3Q86Y29 109 aa9.18□□□□□ -0.94
ERCC1-201ENST00000013807 TPRXLQ17RH7 258 aa9.17□□□□□ -0.94
ERCC1-201ENST00000013807 TMEM170BQ5T4T1 132 aa9.16□□□□□ -0.94
ERCC1-201ENST00000013807 PMCHL1Q16048 86 aa9.15□□□□□ -0.94
ERCC1-201ENST00000013807 LCE2AQ5TA79 106 aaPredicted RBP9.14□□□□□ -0.95
ERCC1-201ENST00000013807 CBLN2Q8IUK8 224 aa9.14□□□□□ -0.95
ERCC1-201ENST00000013807 RETNLBQ9BQ08 111 aa9.14□□□□□ -0.95
ERCC1-201ENST00000013807 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
ERCC1-201ENST00000013807 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
ERCC1-201ENST00000013807 SPAG11AQ6PDA7 123 aa9.13□□□□□ -0.95
ERCC1-201ENST00000013807 CHTOPQ9Y3Y2 248 aaKnown RBP9.12□□□□□ -0.95
ERCC1-201ENST00000013807 IGLV7-46A0A075B6I9 117 aa9.11□□□□□ -0.95
ERCC1-201ENST00000013807 SPRR1AP35321 89 aa9.11□□□□□ -0.95
ERCC1-201ENST00000013807 LINC00158P58513 81 aa9.11□□□□□ -0.95
ERCC1-201ENST00000013807 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
ERCC1-201ENST00000013807 SPRR4Q96PI1 79 aa9.11□□□□□ -0.95
ERCC1-201ENST00000013807 CHCHD1Q96BP2 118 aaKnown RBP9.1□□□□□ -0.95
ERCC1-201ENST00000013807 IFI27L1Q96BM0 104 aa9.09□□□□□ -0.95
ERCC1-201ENST00000013807 YPEL4Q96NS1 127 aa9.09□□□□□ -0.95
ERCC1-201ENST00000013807 HIGD2AQ9BW72 106 aa9.09□□□□□ -0.95
ERCC1-201ENST00000013807 CDIP1Q9H305 208 aa9.09□□□□□ -0.95
ERCC1-201ENST00000013807 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
ERCC1-201ENST00000013807 PRYO14603 147 aa9.08□□□□□ -0.96
ERCC1-201ENST00000013807 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
ERCC1-201ENST00000013807 KCNQ1DNQ9H478 68 aa9.08□□□□□ -0.96
ERCC1-201ENST00000013807 LINC00587B1AMM8 73 aa9.07□□□□□ -0.96
ERCC1-201ENST00000013807 SNAPINO95295 136 aa9.07□□□□□ -0.96
ERCC1-201ENST00000013807 HERV-K104P63124 156 aa9.07□□□□□ -0.96
ERCC1-201ENST00000013807 SVBPQ8N300 66 aa9.07□□□□□ -0.96
ERCC1-201ENST00000013807 ZNF706Q9Y5V0 76 aaPredicted RBP9.07□□□□□ -0.96
ERCC1-201ENST00000013807 APOC3P02656 99 aa9.06□□□□□ -0.96
ERCC1-201ENST00000013807 SMIM13P0DJ93 91 aa9.06□□□□□ -0.96
ERCC1-201ENST00000013807 FP248Q71RG6 208 aaPredicted RBP9.06□□□□□ -0.96
ERCC1-201ENST00000013807 LOC107984156A0A0G2JMH3 177 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 A0A0U1RRA0 63 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 ARL17AQ8IVW1 177 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 PPDPFQ9H3Y8 114 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 FAT4Q6V0I7 4981 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 MUC17Q685J3 4493 aa9.05□□□□□ -0.96
ERCC1-201ENST00000013807 BOD1L2Q8IYS8 172 aa9.04□□□□□ -0.96
ERCC1-201ENST00000013807 MIR7-3HGQ8N6C7 128 aa9.04□□□□□ -0.96
ERCC1-201ENST00000013807 ATP6V1G1O75348 118 aa9.03□□□□□ -0.96
ERCC1-201ENST00000013807 NDUFA5Q16718 116 aa9.03□□□□□ -0.96
ERCC1-201ENST00000013807 LINC00483Q53H64 154 aa9.03□□□□□ -0.96
ERCC1-201ENST00000013807 KRTAP9-2Q9BYQ4 174 aa9.03□□□□□ -0.96
ERCC1-201ENST00000013807 SMCR5Q8TEV8 140 aa9.02□□□□□ -0.97
ERCC1-201ENST00000013807 C4orf48Q5BLP8 95 aa9.01□□□□□ -0.97
ERCC1-201ENST00000013807 MEIG1Q5JSS6 88 aa9.01□□□□□ -0.97
ERCC1-201ENST00000013807 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
ERCC1-201ENST00000013807 TRBV10-3A0A0K0K1G6 114 aa9□□□□□ -0.97
ERCC1-201ENST00000013807 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
ERCC1-201ENST00000013807 SPINK1P00995 79 aa9□□□□□ -0.97
ERCC1-201ENST00000013807 MAP1LC3CQ9BXW4 147 aa9□□□□□ -0.97
ERCC1-201ENST00000013807 Q8NBF4 154 aa8.99□□□□□ -0.97
ERCC1-201ENST00000013807 TRBV10-2A0A0K0K1G8 114 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 ETDCA0A1B0GVM5 59 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 NCR3O14931 201 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 HSBP1O75506 76 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 KRTAP13-3Q3SY46 172 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 FAM19A2Q8N3H0 131 aa8.98□□□□□ -0.97
ERCC1-201ENST00000013807 B5MCH6 92 aa8.97□□□□□ -0.97
ERCC1-201ENST00000013807 RPS29P62273 56 aaKnown RBP8.97□□□□□ -0.97
ERCC1-201ENST00000013807 DAND5Q8N907 189 aa8.97□□□□□ -0.97
ERCC1-201ENST00000013807 LEPROTO15243 131 aa8.96□□□□□ -0.98
ERCC1-201ENST00000013807 S100A12P80511 92 aa8.96□□□□□ -0.98
ERCC1-201ENST00000013807 SSBP3-AS1Q7Z2R9 100 aa8.96□□□□□ -0.98
ERCC1-201ENST00000013807 TSPEAR-AS2P59090 65 aa8.95□□□□□ -0.98
ERCC1-201ENST00000013807 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
ERCC1-201ENST00000013807 ASB16-AS1Q495Z4 193 aa8.94□□□□□ -0.98
ERCC1-201ENST00000013807 NDUFC2O95298 119 aa8.93□□□□□ -0.98
ERCC1-201ENST00000013807 PLNP26678 52 aa8.93□□□□□ -0.98
ERCC1-201ENST00000013807 NMUP48645 174 aa8.93□□□□□ -0.98
ERCC1-201ENST00000013807 LINC00310P59036 64 aa8.93□□□□□ -0.98
ERCC1-201ENST00000013807 J3QQQ9 107 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 ERC2-IT1O76042 136 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 IGLV6-57P01721 117 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 DDTP30046 118 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 GAGE2AQ6NT46 116 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 Q6ZRX8 168 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 Q9BRP9 147 aa8.92□□□□□ -0.98
ERCC1-201ENST00000013807 TRGC2P03986 189 aa8.91□□□□□ -0.98
ERCC1-201ENST00000013807 SPANXB1Q9NS25 103 aaPredicted RBP8.91□□□□□ -0.98
ERCC1-201ENST00000013807 SERF1AO75920 110 aa8.9□□□□□ -0.98
ERCC1-201ENST00000013807 Q8N377 158 aa8.9□□□□□ -0.98
ERCC1-201ENST00000013807 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
ERCC1-201ENST00000013807 C5orf52A6NGY3 159 aa8.88□□□□□ -0.99
ERCC1-201ENST00000013807 H0Y8G0 127 aa8.88□□□□□ -0.99
ERCC1-201ENST00000013807 DPM2O94777 84 aa8.88□□□□□ -0.99
ERCC1-201ENST00000013807 MOBPQ13875 183 aa8.88□□□□□ -0.99
ERCC1-201ENST00000013807 HERVK_113P61574 105 aa8.87□□□□□ -0.99
ERCC1-201ENST00000013807 MIEN1Q9BRT3 115 aa8.87□□□□□ -0.99
ERCC1-201ENST00000013807 IGLV9-49A0A0B4J1Y8 123 aa8.86□□□□□ -0.99
ERCC1-201ENST00000013807 SLC25A20O43772 301 aa8.86□□□□□ -0.99
ERCC1-201ENST00000013807 IGKCP01834 107 aa8.86□□□□□ -0.99
ERCC1-201ENST00000013807 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
ERCC1-201ENST00000013807 LGALS3P17931 250 aaKnown RBP8.85□□□□□ -0.99
ERCC1-201ENST00000013807 SEC61BP60468 96 aaKnown RBP8.85□□□□□ -0.99
ERCC1-201ENST00000013807 S100A7L2Q5SY68 101 aa8.84□□□□□ -0.99
ERCC1-201ENST00000013807 SOSTDC1Q6X4U4 206 aa8.84□□□□□ -0.99
ERCC1-201ENST00000013807 KRTAP4-1Q9BYQ7 146 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms