RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 NTN5Q8WTR8 489 aaPredicted RBP11.73□□□□□ -0.53
PHGDH-211ENST00000641213 MRPL23Q16540 153 aaKnown RBP11.72□□□□□ -0.53
PHGDH-211ENST00000641213 C2orf82Q6UX34 121 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 LINC01561Q8N1V8 128 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 CDIP1Q9H305 208 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 C11orf68Q9H3H3 251 aaKnown RBP11.72□□□□□ -0.53
PHGDH-211ENST00000641213 SND1-IT1Q9HBX3 110 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 COX7A2LO14548 114 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 PFN2P35080 140 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 OXLD1Q5BKU9 147 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 Q8IZM0 81 aa11.72□□□□□ -0.53
PHGDH-211ENST00000641213 ANGP03950 147 aaKnown RBP11.71□□□□□ -0.53
PHGDH-211ENST00000641213 CCL18P55774 89 aa11.71□□□□□ -0.53
PHGDH-211ENST00000641213 IGKV2-28A0A075B6P5 120 aa11.71□□□□□ -0.54
PHGDH-211ENST00000641213 H3BT86 120 aa11.71□□□□□ -0.54
PHGDH-211ENST00000641213 IGKV2D-28P01615 120 aa11.71□□□□□ -0.54
PHGDH-211ENST00000641213 REG3AQ06141 175 aa11.71□□□□□ -0.54
PHGDH-211ENST00000641213 TRAV13-2A0A0B4J235 113 aa11.7□□□□□ -0.54
PHGDH-211ENST00000641213 KRTAP10-11P60412 298 aa11.7□□□□□ -0.54
PHGDH-211ENST00000641213 CD164L2Q6UWJ8 174 aa11.7□□□□□ -0.54
PHGDH-211ENST00000641213 LINC00337Q8N6G1 96 aa11.7□□□□□ -0.54
PHGDH-211ENST00000641213 CHCHD10Q8WYQ3 142 aaPredicted RBP11.69□□□□□ -0.54
PHGDH-211ENST00000641213 TEX49A0A1B0GTD5 131 aa11.69□□□□□ -0.54
PHGDH-211ENST00000641213 CRPP02741 224 aa11.69□□□□□ -0.54
PHGDH-211ENST00000641213 IGLV10-54A0A075B6I4 117 aa11.68□□□□□ -0.54
PHGDH-211ENST00000641213 KRTAP24-1Q3LI83 254 aa11.68□□□□□ -0.54
PHGDH-211ENST00000641213 LELP1Q5T871 98 aa11.68□□□□□ -0.54
PHGDH-211ENST00000641213 BAHCC1Q9P281 2608 aa11.67□□□□□ -0.54
PHGDH-211ENST00000641213 UBE2WQ96B02 151 aa11.67□□□□□ -0.54
PHGDH-211ENST00000641213 KIAA0087Q14695 138 aa11.66□□□□□ -0.54
PHGDH-211ENST00000641213 RPL28P46779 137 aaKnown RBP11.66□□□□□ -0.54
PHGDH-211ENST00000641213 RETNQ9HD89 108 aa11.65□□□□□ -0.54
PHGDH-211ENST00000641213 CKS1BP61024 79 aa11.64□□□□□ -0.55
PHGDH-211ENST00000641213 SCGB1A1P11684 91 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 MALP21145 153 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 EGFEM1PQ0D2K5 195 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 FAM218AQ96MZ4 157 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 TRACP01848 142 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
PHGDH-211ENST00000641213 XGP55808 180 aa11.62□□□□□ -0.55
PHGDH-211ENST00000641213 SMIM11BQ8TCY0 68 aa11.62□□□□□ -0.55
PHGDH-211ENST00000641213 CXCL5P42830 114 aa11.61□□□□□ -0.55
PHGDH-211ENST00000641213 LYPD5Q6UWN5 251 aa11.61□□□□□ -0.55
PHGDH-211ENST00000641213 CYSRT1A8MQ03 144 aa11.61□□□□□ -0.55
PHGDH-211ENST00000641213 C3orf56Q8N813 242 aa11.61□□□□□ -0.55
PHGDH-211ENST00000641213 MT-ATP8P03928 68 aa11.6□□□□□ -0.55
PHGDH-211ENST00000641213 PRR34Q9NV39 138 aa11.6□□□□□ -0.55
PHGDH-211ENST00000641213 KLK12Q9UKR0 248 aa11.6□□□□□ -0.55
PHGDH-211ENST00000641213 PKD1L1Q8TDX9 2849 aa11.6□□□□□ -0.55
PHGDH-211ENST00000641213 CMYA5Q8N3K9 4069 aa11.59□□□□□ -0.55
PHGDH-211ENST00000641213 FBN1P35555 2871 aaKnown RBP11.59□□□□□ -0.55
PHGDH-211ENST00000641213 COX17Q14061 63 aa11.59□□□□□ -0.55
PHGDH-211ENST00000641213 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
PHGDH-211ENST00000641213 STAB1Q9NY15 2570 aa11.59□□□□□ -0.55
PHGDH-211ENST00000641213 TRAV8-4A0A0B4J246 113 aa11.58□□□□□ -0.56
PHGDH-211ENST00000641213 ENHOQ6UWT2 76 aa11.58□□□□□ -0.56
PHGDH-211ENST00000641213 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
PHGDH-211ENST00000641213 H3BNG1 76 aa11.56□□□□□ -0.56
PHGDH-211ENST00000641213 C9orf116Q5BN46 136 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-211ENST00000641213 KPRPQ5T749 579 aaPredicted RBP11.56□□□□□ -0.56
PHGDH-211ENST00000641213 OR13C6PQ8NH95 151 aa11.56□□□□□ -0.56
PHGDH-211ENST00000641213 BAALC-AS2P0C853 105 aa11.56□□□□□ -0.56
PHGDH-211ENST00000641213 Q6ZTC4 211 aa11.56□□□□□ -0.56
PHGDH-211ENST00000641213 H0YGX0 51 aa11.54□□□□□ -0.56
PHGDH-211ENST00000641213 SPAG11BQ08648 103 aa11.54□□□□□ -0.56
PHGDH-211ENST00000641213 C6orf223Q8N319 242 aa11.54□□□□□ -0.56
PHGDH-211ENST00000641213 A0A087WYN8 130 aa11.53□□□□□ -0.56
PHGDH-211ENST00000641213 Q9HAA7 133 aa11.53□□□□□ -0.56
PHGDH-211ENST00000641213 C22orf24Q9Y442 160 aa11.53□□□□□ -0.56
PHGDH-211ENST00000641213 PRR3P79522 188 aaKnown RBP11.53□□□□□ -0.56
PHGDH-211ENST00000641213 C10orf25Q5T742 122 aa11.53□□□□□ -0.56
PHGDH-211ENST00000641213 NDUFC2O95298 119 aa11.52□□□□□ -0.57
PHGDH-211ENST00000641213 UNQ6190/PRO20217Q6UXQ8 127 aa11.52□□□□□ -0.57
PHGDH-211ENST00000641213 WFDC10BQ8IUB3 73 aa11.52□□□□□ -0.57
PHGDH-211ENST00000641213 TENM3Q9P273 2699 aa11.52□□□□□ -0.57
PHGDH-211ENST00000641213 ANK2Q01484 3957 aa11.52□□□□□ -0.57
PHGDH-211ENST00000641213 LINC00526Q96FQ7 95 aa11.51□□□□□ -0.57
PHGDH-211ENST00000641213 A0A0J9YWU9 116 aa11.5□□□□□ -0.57
PHGDH-211ENST00000641213 FAM240AA0A1B0GVK7 77 aa11.49□□□□□ -0.57
PHGDH-211ENST00000641213 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
PHGDH-211ENST00000641213 DNAH3Q8TD57 4116 aa11.48□□□□□ -0.57
PHGDH-211ENST00000641213 DNAL4O96015 105 aa11.48□□□□□ -0.57
PHGDH-211ENST00000641213 MAST4O15021 2626 aa11.48□□□□□ -0.57
PHGDH-211ENST00000641213 Q8NDZ9 215 aa11.48□□□□□ -0.57
PHGDH-211ENST00000641213 ESRGQ1W209 222 aa11.47□□□□□ -0.57
PHGDH-211ENST00000641213 LECT2O14960 151 aa11.47□□□□□ -0.57
PHGDH-211ENST00000641213 MUC7Q8TAX7 377 aa11.46□□□□□ -0.57
PHGDH-211ENST00000641213 C15orf53Q8NAA6 179 aa11.45□□□□□ -0.58
PHGDH-211ENST00000641213 C11orf45Q8TAV5 145 aa11.45□□□□□ -0.58
PHGDH-211ENST00000641213 TMEM126AQ9H061 195 aa11.45□□□□□ -0.58
PHGDH-211ENST00000641213 DEFB131BA0A096LNP1 70 aa11.45□□□□□ -0.58
PHGDH-211ENST00000641213 SNCGO76070 127 aa11.45□□□□□ -0.58
PHGDH-211ENST00000641213 GVQW2A0A096LPI5 108 aaPredicted RBP11.44□□□□□ -0.58
PHGDH-211ENST00000641213 NCR3O14931 201 aa11.44□□□□□ -0.58
PHGDH-211ENST00000641213 KRTAP26-1Q6PEX3 210 aa11.44□□□□□ -0.58
PHGDH-211ENST00000641213 C6orf48Q9UBA6 75 aa11.42□□□□□ -0.58
PHGDH-211ENST00000641213 ACYP1P07311 99 aa11.42□□□□□ -0.58
PHGDH-211ENST00000641213 SLPIP03973 132 aa11.41□□□□□ -0.58
PHGDH-211ENST00000641213 INAFM2P0DMQ5 153 aa11.41□□□□□ -0.58
PHGDH-211ENST00000641213 TTC32Q5I0X7 151 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms