RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 IGLV5-39A0A0G2JS06 123 aa8.45□□□□□ -1.06
GTF3A-209ENST00000640289 F8WDY8 70 aa8.45□□□□□ -1.06
GTF3A-209ENST00000640289 SYS1-DBNDD2H3BUS1 97 aa8.45□□□□□ -1.06
GTF3A-209ENST00000640289 CHTF8P0CG12 524 aa8.45□□□□□ -1.06
GTF3A-209ENST00000640289 C6orf48Q9UBA6 75 aa8.45□□□□□ -1.06
GTF3A-209ENST00000640289 A0A096LNI7 61 aa8.44□□□□□ -1.06
GTF3A-209ENST00000640289 S100A6P06703 90 aa8.44□□□□□ -1.06
GTF3A-209ENST00000640289 C3orf79P0CE67 100 aa8.44□□□□□ -1.06
GTF3A-209ENST00000640289 CKS1BP61024 79 aa8.44□□□□□ -1.06
GTF3A-209ENST00000640289 HIST3H2BBQ8N257 126 aa8.44□□□□□ -1.06
GTF3A-209ENST00000640289 IGKV2-24A0A0C4DH68 120 aa8.43□□□□□ -1.06
GTF3A-209ENST00000640289 TMEM223A0PJW6 202 aa8.43□□□□□ -1.06
GTF3A-209ENST00000640289 SNRPEP62304 92 aaKnown RBP8.43□□□□□ -1.06
GTF3A-209ENST00000640289 RNF151Q2KHN1 245 aa8.43□□□□□ -1.06
GTF3A-209ENST00000640289 C9orf116Q5BN46 136 aaPredicted RBP8.43□□□□□ -1.06
GTF3A-209ENST00000640289 TRBV30A0A0K0K1B3 111 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 LOC107984640A0A0U1RRK4 108 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 DPM2O94777 84 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 IGKCP01834 107 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 PLNP26678 52 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 KRTDAPP60985 99 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 RPL18AQ02543 176 aaKnown RBP8.42□□□□□ -1.06
GTF3A-209ENST00000640289 PET117Q6UWS5 81 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 SCXQ7RTU7 201 aa8.42□□□□□ -1.06
GTF3A-209ENST00000640289 CXCL5P42830 114 aa8.41□□□□□ -1.06
GTF3A-209ENST00000640289 GAGE2BQ13066 116 aa8.41□□□□□ -1.06
GTF3A-209ENST00000640289 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
GTF3A-209ENST00000640289 LINC01545Q5VT33 79 aa8.41□□□□□ -1.06
GTF3A-209ENST00000640289 SPACA4Q8TDM5 124 aa8.41□□□□□ -1.06
GTF3A-209ENST00000640289 HIST1H2BLQ99880 126 aa8.41□□□□□ -1.06
GTF3A-209ENST00000640289 S100A2P29034 98 aa8.4□□□□□ -1.06
GTF3A-209ENST00000640289 MAJINQ3KP22 176 aa8.4□□□□□ -1.06
GTF3A-209ENST00000640289 CIRBP-AS1Q8TBR5 109 aa8.4□□□□□ -1.06
GTF3A-209ENST00000640289 KRTAP17-1Q9BYP8 105 aa8.4□□□□□ -1.06
GTF3A-209ENST00000640289 HERC2O95714 4834 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 HSPG2P98160 4391 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 C5orf52A6NGY3 159 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 SMR3BP02814 79 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-209ENST00000640289 PTTG1IPP53801 180 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 Q6ZRP5 223 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 PKIGQ9Y2B9 76 aa8.39□□□□□ -1.07
GTF3A-209ENST00000640289 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
GTF3A-209ENST00000640289 GAGE2EQ4V326 116 aa8.38□□□□□ -1.07
GTF3A-209ENST00000640289 GAGE2DQ9UEU5 116 aa8.38□□□□□ -1.07
GTF3A-209ENST00000640289 A0A087WYN8 130 aa8.37□□□□□ -1.07
GTF3A-209ENST00000640289 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
GTF3A-209ENST00000640289 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
GTF3A-209ENST00000640289 STPG4Q8N801 248 aa8.36□□□□□ -1.07
GTF3A-209ENST00000640289 ZNF625Q96I27 306 aaPredicted RBP8.36□□□□□ -1.07
GTF3A-209ENST00000640289 LEPROTO15243 131 aa8.35□□□□□ -1.07
GTF3A-209ENST00000640289 HERVK_113P61574 105 aa8.35□□□□□ -1.07
GTF3A-209ENST00000640289 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
GTF3A-209ENST00000640289 C20orf202A1L168 122 aa8.34□□□□□ -1.07
GTF3A-209ENST00000640289 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
GTF3A-209ENST00000640289 A0A1W2PNN7 141 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 PFN2P35080 140 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
GTF3A-209ENST00000640289 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 Q8N1X5 172 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 PLEKHB2Q96CS7 222 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 NDUFA12Q9UI09 145 aa8.33□□□□□ -1.08
GTF3A-209ENST00000640289 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
GTF3A-209ENST00000640289 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
GTF3A-209ENST00000640289 E9PLD3 99 aa8.32□□□□□ -1.08
GTF3A-209ENST00000640289 J3QQQ9 107 aa8.32□□□□□ -1.08
GTF3A-209ENST00000640289 LCE2DQ5TA82 110 aaPredicted RBP8.32□□□□□ -1.08
GTF3A-209ENST00000640289 XAGE1AQ9HD64 81 aa8.32□□□□□ -1.08
GTF3A-209ENST00000640289 ERG28Q9UKR5 140 aa8.32□□□□□ -1.08
GTF3A-209ENST00000640289 SFTA2Q6UW10 78 aa8.31□□□□□ -1.08
GTF3A-209ENST00000640289 LINC00528Q8N1L1 170 aa8.31□□□□□ -1.08
GTF3A-209ENST00000640289 A0A0U1RRA0 63 aa8.3□□□□□ -1.08
GTF3A-209ENST00000640289 MYMXA0A1B0GTQ4 84 aa8.3□□□□□ -1.08
GTF3A-209ENST00000640289 LGALS3P17931 250 aaKnown RBP8.3□□□□□ -1.08
GTF3A-209ENST00000640289 FAM19A5Q7Z5A7 132 aaPredicted RBP8.3□□□□□ -1.08
GTF3A-209ENST00000640289 KRTAP7-1Q8IUC3 87 aa8.3□□□□□ -1.08
GTF3A-209ENST00000640289 KRTAP4-5Q9BYR2 181 aa8.3□□□□□ -1.08
GTF3A-209ENST00000640289 IGKV2D-26A0A0A0MRZ7 120 aa8.29□□□□□ -1.08
GTF3A-209ENST00000640289 EPM2AB3EWF7 344 aa8.29□□□□□ -1.08
GTF3A-209ENST00000640289 Q5VSD8 79 aa8.29□□□□□ -1.08
GTF3A-209ENST00000640289 SMIM13P0DJ93 91 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 LINC00158P58513 81 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 HERV-K104P63124 156 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 COX17Q14061 63 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 MEIG1Q5JSS6 88 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 TTTY13Q9BZ97 58 aa8.28□□□□□ -1.08
GTF3A-209ENST00000640289 FAT1Q14517 4588 aa8.27□□□□□ -1.08
GTF3A-209ENST00000640289 NMUP48645 174 aa8.27□□□□□ -1.09
GTF3A-209ENST00000640289 SERTAD4-AS1Q5TG53 156 aa8.27□□□□□ -1.09
GTF3A-209ENST00000640289 PHF5AQ7RTV0 110 aaKnown RBP8.27□□□□□ -1.09
GTF3A-209ENST00000640289 FAM229AH3BQW9 127 aa8.26□□□□□ -1.09
GTF3A-209ENST00000640289 SCGB1D1O95968 90 aa8.26□□□□□ -1.09
GTF3A-209ENST00000640289 AKR1D1P51857 326 aa8.26□□□□□ -1.09
GTF3A-209ENST00000640289 SND1-IT1Q9HBX3 110 aa8.26□□□□□ -1.09
GTF3A-209ENST00000640289 A0A0J9YXY3 114 aa8.24□□□□□ -1.09
GTF3A-209ENST00000640289 M0QXV9 152 aa8.24□□□□□ -1.09
GTF3A-209ENST00000640289 MIR7-3HGQ8N6C7 128 aa8.24□□□□□ -1.09
GTF3A-209ENST00000640289 C7orf33Q8WU49 177 aa8.24□□□□□ -1.09
GTF3A-209ENST00000640289 ZNF815PA8K554 130 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms