RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 PLNP26678 52 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 GAGE2EQ4V326 116 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 Q6ZRN7 208 aaPredicted RBP3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 FAM104AQ969W3 186 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 GAGE2DQ9UEU5 116 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 A0A087WZ39 114 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 PFN2P35080 140 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 NMUP48645 174 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 UNQ6190/PRO20217Q6UXQ8 127 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 STPG4Q8N801 248 aa3.82□□□□□ -1.8
HNRNPU-220ENST00000639667 PTTG1IPP53801 180 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 C15orf56Q8N910 161 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 PGPEP1Q9NXJ5 209 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 GCSHP23434 173 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 LINC00158P58513 81 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 KRTAP10-2P60368 255 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 ALMS1Q8TCU4 4167 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 LRCOL1A6NCL2 159 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 Q6ZRU5 148 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 DNAH7Q8WXX0 4024 aa3.81□□□□□ -1.8
HNRNPU-220ENST00000639667 HAMPP81172 84 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 KRTAP26-1Q6PEX3 210 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 PLEKHB2Q96CS7 222 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 SMIM1B2RUZ4 78 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 LINC01545Q5VT33 79 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 SLC25A34Q6PIV7 304 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 C9orf116Q5BN46 136 aaPredicted RBP3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 SCGB1D4Q6XE38 83 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 NDUFA12Q9UI09 145 aa3.8□□□□□ -1.8
HNRNPU-220ENST00000639667 GVQW2A0A096LPI5 108 aaPredicted RBP3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 NTN5Q8WTR8 489 aaPredicted RBP3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 TMEM223A0PJW6 202 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 C10orf25Q5T742 122 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 KRTAP3-3Q9BYR6 98 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 KRTAP3-2Q9BYR7 98 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 MYMXA0A1B0GTQ4 84 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 J3QQQ9 107 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 Q8IZM0 81 aa3.79□□□□□ -1.8
HNRNPU-220ENST00000639667 CXCL5P42830 114 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 C2orf48Q96LS8 159 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 CSMD3Q7Z407 3707 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 LOC107984640A0A0U1RRK4 108 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 ZNF815PA8K554 130 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 LEPROTO15243 131 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 NPC2P61916 151 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 VPS13DQ5THJ4 4388 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 CHTF8P0CG12 524 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 BATFQ16520 125 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 XAGE1AQ9HD64 81 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 PKIGQ9Y2B9 76 aa3.78□□□□□ -1.8
HNRNPU-220ENST00000639667 CIRBPQ14011 172 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 LINC01561Q8N1V8 128 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 DYNC2H1Q8NCM8 4307 aaKnown RBP3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 TTTY13Q9BZ97 58 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 SLPIP03973 132 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 COX8AP10176 69 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 C9orf163Q8N9P6 203 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 C6orf48Q9UBA6 75 aa3.77□□□□□ -1.81
HNRNPU-220ENST00000639667 IGLV5-45A0A087WSX0 123 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 SMIM13P0DJ93 91 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 KRTAP10-1P60331 282 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 KIAA0087Q14695 138 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 FAM19A5Q7Z5A7 132 aaPredicted RBP3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 FAM19A3Q7Z5A8 133 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 TRBV30A0A0K0K1B3 111 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 DAND5Q8N907 189 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 ERG28Q9UKR5 140 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 SACSQ9NZJ4 4579 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 A6NDN8 102 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 E9PLD3 99 aa3.76□□□□□ -1.81
HNRNPU-220ENST00000639667 IGLV5-39A0A0G2JS06 123 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 SMR3BP02814 79 aaPredicted RBP3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 CNBPP62633 177 aaKnown RBP3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 UBE2BP63146 152 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 SRSF9Q13242 221 aaKnown RBP eCLIP3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 A0A096LNI7 61 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 GAGE10A6NGK3 116 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 HINT1P49773 126 aaPredicted RBP3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 TSPEAR-AS2P59090 65 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 HERV-K104P63124 156 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 NKAPP1Q8N9T2 125 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 IGKV2D-26A0A0A0MRZ7 120 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 F8WDY8 70 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 HSD52Q0P140 79 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 UBE2V1Q13404 147 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 BOD1L2Q8IYS8 172 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 MIR7-3HGQ8N6C7 128 aa3.75□□□□□ -1.81
HNRNPU-220ENST00000639667 BVES-AS1Q5T3Y7 98 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 SFTA2Q6UW10 78 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 PCP2Q8IVA1 136 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 DNAH1Q9P2D7 4330 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 NDUFC2-KCTD14E9PQ53 114 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 HIGD1BQ9P298 99 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 LINC00474Q9P2X8 69 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 A0A1B0GVY2 172 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 OR13C6PQ8NH95 151 aa3.74□□□□□ -1.81
HNRNPU-220ENST00000639667 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
HNRNPU-220ENST00000639667 FAM30AQ9NZY2 134 aa3.73□□□□□ -1.81
HNRNPU-220ENST00000639667 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.73□□□□□ -1.81
HNRNPU-220ENST00000639667 A0A087WYN8 130 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms