RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 Q8N8P6 123 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 TEX49A0A1B0GTD5 131 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 MYMXA0A1B0GTQ4 84 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 NPYP01303 97 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 LYPD5Q6UWN5 251 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 HIST1H4GQ99525 98 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
RTTN-215ENST00000639487 TRBV7-3A0A075B6L6 115 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 MIAQ16674 131 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 IGHV3OR16-8A0A075B7F1 116 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 CXCL5P42830 114 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 COX17Q14061 63 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 FAM222AQ5U5X8 452 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 IFI27L1Q96BM0 104 aa4.36□□□□□ -1.71
RTTN-215ENST00000639487 MAP1AP78559 2803 aaPredicted RBP4.36□□□□□ -1.71
RTTN-215ENST00000639487 ARMS2P0C7Q2 107 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 RPL11P62913 178 aaKnown RBP4.35□□□□□ -1.71
RTTN-215ENST00000639487 UBE2WQ96B02 151 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 IGHV1-58A0A0C4DH39 117 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 HIST1H4AP62805 103 aaKnown RBP4.35□□□□□ -1.71
RTTN-215ENST00000639487 NAV3Q8IVL0 2385 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 HERC2O95714 4834 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 IGLV5-39A0A0G2JS06 123 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 A0A0J9YWU9 116 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 A0A1B0GUT8 65 aa4.35□□□□□ -1.71
RTTN-215ENST00000639487 ZNF22P17026 224 aaPredicted RBP4.35□□□□□ -1.71
RTTN-215ENST00000639487 LGALS3P17931 250 aaKnown RBP4.35□□□□□ -1.71
RTTN-215ENST00000639487 IGLV10-54A0A075B6I4 117 aa4.34□□□□□ -1.71
RTTN-215ENST00000639487 NBDYA0A0U1RRE5 68 aa4.34□□□□□ -1.71
RTTN-215ENST00000639487 D6R8Y8 96 aa4.34□□□□□ -1.71
RTTN-215ENST00000639487 IGHV3-48P01763 117 aa4.34□□□□□ -1.71
RTTN-215ENST00000639487 COPS9Q8WXC6 57 aa4.34□□□□□ -1.71
RTTN-215ENST00000639487 SETXQ7Z333 2677 aaKnown RBP4.34□□□□□ -1.71
RTTN-215ENST00000639487 TRAV8-3A0A0A6YYJ7 113 aa4.34□□□□□ -1.72
RTTN-215ENST00000639487 M0R378 163 aa4.34□□□□□ -1.72
RTTN-215ENST00000639487 TSHBP01222 138 aa4.34□□□□□ -1.72
RTTN-215ENST00000639487 TRBV6-8A0A0A6YYG3 113 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 TMEM256-PLSCR3K7ERE1 68 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 C5orf38Q86SI9 138 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 LINC00643Q86TS7 51 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 MPLKIPQ8TAP9 179 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 IGIPA6NJ69 53 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 ZNF73O43830 326 aaPredicted RBP4.33□□□□□ -1.72
RTTN-215ENST00000639487 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 CELA1Q9UNI1 258 aa4.33□□□□□ -1.72
RTTN-215ENST00000639487 I3L3M4 83 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 HBDP02042 147 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 PRSS1P07477 247 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 GAS8-AS1O95177 125 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 C8orf49Q96NF6 230 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 CCL18P55774 89 aa4.32□□□□□ -1.72
RTTN-215ENST00000639487 NIPBLQ6KC79 2804 aaeCLIP4.31□□□□□ -1.72
RTTN-215ENST00000639487 H7C2G1 150 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 CCKP06307 115 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 PRB3Q04118 309 aaPredicted RBP4.31□□□□□ -1.72
RTTN-215ENST00000639487 PLAC8Q9NZF1 115 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 LINC00588Q9Y4M8 146 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 A8MUN3 132 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 UBE2D4Q9Y2X8 147 aa4.31□□□□□ -1.72
RTTN-215ENST00000639487 SCGB1D4Q6XE38 83 aa4.3□□□□□ -1.72
RTTN-215ENST00000639487 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
RTTN-215ENST00000639487 RPL37AP61513 92 aaKnown RBP4.3□□□□□ -1.72
RTTN-215ENST00000639487 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
RTTN-215ENST00000639487 ACYP1P07311 99 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 SOSTDC1Q6X4U4 206 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 SMCR5Q8TEV8 140 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 DEFB131BA0A096LNP1 70 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 C20orf203Q8NBC4 194 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
RTTN-215ENST00000639487 LST1O00453 97 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 CSMD1Q96PZ7 3565 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 COL7A1Q02388 2944 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 RTL8CO15255 209 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 UBE2D1P51668 147 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 RPL36AP83881 106 aaKnown RBP4.28□□□□□ -1.72
RTTN-215ENST00000639487 MRPL51Q4U2R6 128 aaKnown RBP4.28□□□□□ -1.72
RTTN-215ENST00000639487 Q8IZM0 81 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
RTTN-215ENST00000639487 CDC42SE2Q9NRR3 84 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 LRRK2Q5S007 2527 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 A0A087WZ39 114 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 UBE2L6O14933 153 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 NDUFS5O43920 106 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 SLC25A29Q8N8R3 303 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 PKDREJQ9NTG1 2253 aa4.28□□□□□ -1.72
RTTN-215ENST00000639487 TRBV10-2A0A0K0K1G8 114 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 H7BZZ5 65 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 C2orf82Q6UX34 121 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 C20orf197Q8N268 126 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 IGHV3-64A0A075B6Q5 118 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 C11orf86A6NJI1 115 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 M0R3E3 92 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 CKS2P33552 79 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 ZNF876PQ49A33 203 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 NTM-AS1Q6ZSK4 140 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 ORMDL3Q8N138 153 aa4.27□□□□□ -1.73
RTTN-215ENST00000639487 MYCBP2O75592 4640 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms