RNA–Protein interactions for RNA: ENST00000638159.1

GABRA1-220, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5 BASIC

Gene GABRA1, Length 4,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-220ENST00000638159 PAM16Q9Y3D7 125 aa2.72□□□□□ -1.97
GABRA1-220ENST00000638159 GNG4P50150 75 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 GNG5P63218 68 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 Q6AWC8 147 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 FMC1Q96HJ9 113 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 CUBNO60494 3623 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.71□□□□□ -1.98
GABRA1-220ENST00000638159 IGKV2-29A2NJV5 120 aaPredicted RBP2.71□□□□□ -1.98
GABRA1-220ENST00000638159 PEX7O00628 323 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 ARL14EPLP0DKL9 152 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 Q6ZVH6 145 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 LINC00158P58513 81 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 COX19Q49B96 90 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 UFSP1Q6NVU6 142 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 FAM167A-AS1Q96KT0 104 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 VAMP8Q9BV40 100 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 TMEM191AQ9H0A3 160 aa2.71□□□□□ -1.98
GABRA1-220ENST00000638159 DNAH9Q9NYC9 4486 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 A0A1B0GXF2 115 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 SH2D1AO60880 128 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 NDUFB4O95168 129 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 SPINK1P00995 79 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 RAB4AP20338 218 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 KRTDAPP60985 99 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 RPL23P62829 140 aaKnown RBP2.7□□□□□ -1.98
GABRA1-220ENST00000638159 TEX43Q6ZNM6 134 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 FA2HQ7L5A8 372 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 FAM19A3Q7Z5A8 133 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 PCP4P48539 62 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 OR13C6PQ8NH95 151 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 TIMM21Q9BVV7 248 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 NAT8BQ9UHF3 227 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 KIAA1109Q2LD37 5005 aa2.7□□□□□ -1.98
GABRA1-220ENST00000638159 SDHAF1A6NFY7 115 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 ZNF815PA8K554 130 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 BCE1O60756 84 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 NTF3P20783 257 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 LINC00310P59036 64 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 PCLOQ9Y6V0 5065 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 LOC389332A0A1B0GUA5 103 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 HSBP1O75506 76 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 STAG3L2P0CL84 134 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 STAG3L3P0CL85 134 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 NPCDR1Q9BY65 106 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 DNAH10Q8IVF4 4471 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 GVQW2A0A096LPI5 108 aaPredicted RBP2.69□□□□□ -1.98
GABRA1-220ENST00000638159 A0A1B0GUV1 79 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 ENHOQ6UWT2 76 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 NEXN-AS1Q8NBZ9 246 aa2.69□□□□□ -1.98
GABRA1-220ENST00000638159 GCHFRP30047 84 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 RPL32P62910 135 aaKnown RBP2.68□□□□□ -1.98
GABRA1-220ENST00000638159 FAM229BQ4G0N7 80 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 GFRA4Q9GZZ7 299 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 A8MWL6 223 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 MRPL55Q7Z7F7 128 aaKnown RBP2.68□□□□□ -1.98
GABRA1-220ENST00000638159 MGST2Q99735 147 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 XAGE1AQ9HD64 81 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 SMIM27A0A1W2PRY6 76 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 DLEU1O43261 78 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 IGLC2P0DOY2 106 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 RNF151Q2KHN1 245 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 COL5A1-AS1Q5SY13 56 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 RPL37AP8A6NKH3 93 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 Q8N3U1 123 aa2.68□□□□□ -1.98
GABRA1-220ENST00000638159 RYR2Q92736 4967 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 TRBV30A0A0K0K1B3 111 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 SERF1AO75920 110 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 CKS2P33552 79 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 PFN2P35080 140 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 GCSAMLQ5JQS6 135 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 H7C2G1 150 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 KIAA1644Q3SXP7 199 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 MRPL54Q6P161 138 aaKnown RBP2.67□□□□□ -1.98
GABRA1-220ENST00000638159 LINC00959A0A1B0GUT2 108 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 SCO2A0A1W2PP80 73 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 A0A1W2PRE2 83 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 TPRXLQ17RH7 258 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 SPATA45Q537H7 98 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 ATOH7Q8N100 152 aa2.67□□□□□ -1.98
GABRA1-220ENST00000638159 H0Y8G0 127 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 VAMP3Q15836 100 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 C9orf92A6NGG3 77 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 CTRLP40313 264 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 KRTAP10-8P60410 259 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 HRCT1Q6UXD1 115 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 DSCR8Q96T75 97 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 VPS25Q9BRG1 176 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 MRPL35Q9NZE8 188 aaKnown RBP2.66□□□□□ -1.98
GABRA1-220ENST00000638159 IGKV2-28A0A075B6P5 120 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 NDUFC2-KCTD14E9PQ53 114 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 LTAP01374 205 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 IGKV2D-28P01615 120 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 CIRBPQ14011 172 aaKnown RBP2.66□□□□□ -1.98
GABRA1-220ENST00000638159 CENPWQ5EE01 88 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 LINC00242Q5T6M2 205 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 OCC1Q8TAD7 63 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 UQCR10Q9UDW1 63 aa2.66□□□□□ -1.98
GABRA1-220ENST00000638159 FAM236AA0A1B0GUQ0 79 aa2.65□□□□□ -1.98
GABRA1-220ENST00000638159 FAM236BA0A1B0GV22 79 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms