RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 GAGE2EQ4V326 116 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 LINC01561Q8N1V8 128 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 LINC00474Q9P2X8 69 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 PKIGQ9Y2B9 76 aa7.86□□□□□ -1.15
CLN6-225ENST00000638144 A0A1W2PNN7 141 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 RNF151Q2KHN1 245 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 C6orf226Q5I0X4 101 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 Q6ZRP5 223 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 FAM19A2Q8N3H0 131 aa7.85□□□□□ -1.15
CLN6-225ENST00000638144 IGLV5-45A0A087WSX0 123 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 FAM168BA1KXE4 195 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 F8WDY8 70 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 LINC00310P59036 64 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 CKS1BP61024 79 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 Q8IZM0 81 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 C7orf33Q8WU49 177 aa7.84□□□□□ -1.15
CLN6-225ENST00000638144 CHCHD1Q96BP2 118 aaKnown RBP7.84□□□□□ -1.15
CLN6-225ENST00000638144 SERF1AO75920 110 aa7.83□□□□□ -1.16
CLN6-225ENST00000638144 ATP5LO75964 103 aa7.83□□□□□ -1.16
CLN6-225ENST00000638144 IGLC3P0DOY3 106 aa7.83□□□□□ -1.16
CLN6-225ENST00000638144 COX7B2Q8TF08 81 aa7.83□□□□□ -1.16
CLN6-225ENST00000638144 TRBV30A0A0K0K1B3 111 aa7.82□□□□□ -1.16
CLN6-225ENST00000638144 C11orf86A6NJI1 115 aa7.82□□□□□ -1.16
CLN6-225ENST00000638144 HSBP1O75506 76 aa7.82□□□□□ -1.16
CLN6-225ENST00000638144 ZNF22P17026 224 aaPredicted RBP7.82□□□□□ -1.16
CLN6-225ENST00000638144 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
CLN6-225ENST00000638144 NUPR1O60356 82 aa7.81□□□□□ -1.16
CLN6-225ENST00000638144 TLX1NBP0CAT3 122 aa7.81□□□□□ -1.16
CLN6-225ENST00000638144 PHF5AQ7RTV0 110 aaKnown RBP7.81□□□□□ -1.16
CLN6-225ENST00000638144 IFI27L1Q96BM0 104 aa7.81□□□□□ -1.16
CLN6-225ENST00000638144 LRP1Q07954 4544 aaKnown RBP7.81□□□□□ -1.16
CLN6-225ENST00000638144 F8VRH5 84 aa7.8□□□□□ -1.16
CLN6-225ENST00000638144 H0Y8G0 127 aa7.8□□□□□ -1.16
CLN6-225ENST00000638144 H3BRM9 83 aa7.8□□□□□ -1.16
CLN6-225ENST00000638144 PRR3P79522 188 aaKnown RBP7.8□□□□□ -1.16
CLN6-225ENST00000638144 CHTOPQ9Y3Y2 248 aaKnown RBP7.8□□□□□ -1.16
CLN6-225ENST00000638144 NDUFC2-KCTD14E9PQ53 114 aa7.79□□□□□ -1.16
CLN6-225ENST00000638144 C9orf129Q5T035 196 aaKnown RBP7.79□□□□□ -1.16
CLN6-225ENST00000638144 TMEM170BQ5T4T1 132 aa7.79□□□□□ -1.16
CLN6-225ENST00000638144 KRTAP7-1Q8IUC3 87 aa7.79□□□□□ -1.16
CLN6-225ENST00000638144 XAGE1AQ9HD64 81 aa7.79□□□□□ -1.16
CLN6-225ENST00000638144 HERC1Q15751 4861 aa7.79□□□□□ -1.16
CLN6-225ENST00000638144 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
CLN6-225ENST00000638144 FABP4P15090 132 aa7.77□□□□□ -1.17
CLN6-225ENST00000638144 CXCL5P42830 114 aa7.77□□□□□ -1.17
CLN6-225ENST00000638144 FAT3Q8TDW7 4589 aa7.76□□□□□ -1.17
CLN6-225ENST00000638144 J3QL48 77 aa7.76□□□□□ -1.17
CLN6-225ENST00000638144 KRTAP11-1Q8IUC1 163 aa7.76□□□□□ -1.17
CLN6-225ENST00000638144 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 M0QXV9 152 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BKO60814 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 LEPROTL1O95214 131 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BJP06899 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BOP23527 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BBP33778 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BDP58876 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BCP62807 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST2H2BEQ16778 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.75□□□□□ -1.17
CLN6-225ENST00000638144 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BHQ93079 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 ZNF625Q96I27 306 aaPredicted RBP7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BNQ99877 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 HIST1H2BMQ99879 126 aa7.75□□□□□ -1.17
CLN6-225ENST00000638144 PSORS1C2Q9UIG4 136 aa7.74□□□□□ -1.17
CLN6-225ENST00000638144 PFN2P35080 140 aa7.73□□□□□ -1.17
CLN6-225ENST00000638144 ODF1Q14990 250 aa7.73□□□□□ -1.17
CLN6-225ENST00000638144 PMCHL2Q9BQD1 86 aa7.73□□□□□ -1.17
CLN6-225ENST00000638144 TMEM223A0PJW6 202 aa7.72□□□□□ -1.17
CLN6-225ENST00000638144 KRTAP29-1A8MX34 341 aaPredicted RBP7.72□□□□□ -1.17
CLN6-225ENST00000638144 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
CLN6-225ENST00000638144 UBE2BP63146 152 aa7.71□□□□□ -1.18
CLN6-225ENST00000638144 HSPB8Q9UJY1 196 aa7.7□□□□□ -1.18
CLN6-225ENST00000638144 ERG28Q9UKR5 140 aa7.7□□□□□ -1.18
CLN6-225ENST00000638144 A0A0U1RRA0 63 aa7.69□□□□□ -1.18
CLN6-225ENST00000638144 ATP6V1G1O75348 118 aa7.69□□□□□ -1.18
CLN6-225ENST00000638144 C22orf24Q9Y442 160 aa7.69□□□□□ -1.18
CLN6-225ENST00000638144 OXTP01178 125 aa7.68□□□□□ -1.18
CLN6-225ENST00000638144 GAGE10A6NGK3 116 aa7.67□□□□□ -1.18
CLN6-225ENST00000638144 TSPEAR-AS2P59090 65 aa7.67□□□□□ -1.18
CLN6-225ENST00000638144 SRSF9Q13242 221 aaKnown RBP eCLIP7.67□□□□□ -1.18
CLN6-225ENST00000638144 DPM2O94777 84 aa7.66□□□□□ -1.18
CLN6-225ENST00000638144 MAP1LC3CQ9BXW4 147 aa7.66□□□□□ -1.18
CLN6-225ENST00000638144 SND1-IT1Q9HBX3 110 aa7.66□□□□□ -1.18
CLN6-225ENST00000638144 RPL37AP8A6NKH3 93 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 IGLV7-43P04211 117 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 MT1HL1P0DM35 61 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 PLNP26678 52 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 SPINK6Q6UWN8 80 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 MRPL55Q7Z7F7 128 aaKnown RBP7.65□□□□□ -1.18
CLN6-225ENST00000638144 Q8NDZ9 215 aa7.65□□□□□ -1.18
CLN6-225ENST00000638144 IGKCP01834 107 aa7.64□□□□□ -1.19
CLN6-225ENST00000638144 LINC00158P58513 81 aa7.64□□□□□ -1.19
CLN6-225ENST00000638144 NKAPP1Q8N9T2 125 aa7.64□□□□□ -1.19
CLN6-225ENST00000638144 LINC00167Q96N53 147 aa7.64□□□□□ -1.19
CLN6-225ENST00000638144 NDUFA12Q9UI09 145 aa7.64□□□□□ -1.19
CLN6-225ENST00000638144 SYS1-DBNDD2H3BUS1 97 aa7.63□□□□□ -1.19
CLN6-225ENST00000638144 SMIM13P0DJ93 91 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 247.9 ms