RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 DAZ2Q13117 558 aaKnown RBP8.16□□□□□ -1.1
CLN6-217ENST00000636964 RHOHQ15669 191 aa8.16□□□□□ -1.1
CLN6-217ENST00000636964 DEFB121Q5J5C9 76 aa8.16□□□□□ -1.1
CLN6-217ENST00000636964 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
CLN6-217ENST00000636964 MGAM2Q2M2H8 2515 aa8.16□□□□□ -1.1
CLN6-217ENST00000636964 RNASE13Q5GAN3 156 aaKnown RBP8.15□□□□□ -1.1
CLN6-217ENST00000636964 PAPPA-AS1Q5QFB9 102 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.15□□□□□ -1.1
CLN6-217ENST00000636964 A0A0J9YXY3 114 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 IGKV2-29A2NJV5 120 aaPredicted RBP8.15□□□□□ -1.1
CLN6-217ENST00000636964 LEPROTO15243 131 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 DEFB130BP0DP73 79 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 DEFB130AP0DP74 79 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 TIMM17AQ99595 171 aa8.15□□□□□ -1.1
CLN6-217ENST00000636964 SMIM26A0A096LP01 95 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 SS18Q15532 418 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 TMEM141Q96I45 108 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 ICOSQ9Y6W8 199 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 DEFB4AO15263 64 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 DEFB135Q30KP9 77 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 LOC100131303A0A0U1RQF7 123 aa8.14□□□□□ -1.11
CLN6-217ENST00000636964 WFDC9Q8NEX5 89 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 SERP1Q9Y6X1 66 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 FAM240AA0A1B0GVK7 77 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 K7EQD1 137 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 PAX4O43316 350 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 CHCHD7Q9BUK0 85 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 DAZ4Q86SG3 579 aaKnown RBP8.13□□□□□ -1.11
CLN6-217ENST00000636964 OVOL2Q9BRP0 275 aa8.13□□□□□ -1.11
CLN6-217ENST00000636964 DAZ3Q9NR90 486 aaKnown RBP8.13□□□□□ -1.11
CLN6-217ENST00000636964 PKD1L1Q8TDX9 2849 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 X6R8D5 127 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 A0A0J9YXV3 536 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
CLN6-217ENST00000636964 RPL36AP83881 106 aaKnown RBP8.11□□□□□ -1.11
CLN6-217ENST00000636964 RPL36ALQ969Q0 106 aaKnown RBP8.11□□□□□ -1.11
CLN6-217ENST00000636964 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.11□□□□□ -1.11
CLN6-217ENST00000636964 LST1O00453 97 aa8.11□□□□□ -1.11
CLN6-217ENST00000636964 TMEM243Q9BU79 118 aa8.11□□□□□ -1.11
CLN6-217ENST00000636964 TRAV8-3A0A0A6YYJ7 113 aa8.1□□□□□ -1.11
CLN6-217ENST00000636964 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
CLN6-217ENST00000636964 FP248Q71RG6 208 aaPredicted RBP8.1□□□□□ -1.11
CLN6-217ENST00000636964 IGHV3-30-3P0DP02 117 aa8.09□□□□□ -1.11
CLN6-217ENST00000636964 IGHV4-30-4P0DP06 118 aa8.09□□□□□ -1.11
CLN6-217ENST00000636964 NTM-AS1Q6ZSK4 140 aa8.09□□□□□ -1.11
CLN6-217ENST00000636964 UBE2D4Q9Y2X8 147 aa8.09□□□□□ -1.11
CLN6-217ENST00000636964 FHL2Q14192 279 aa8.09□□□□□ -1.11
CLN6-217ENST00000636964 APOC4P55056 127 aa8.08□□□□□ -1.12
CLN6-217ENST00000636964 UPK3BQ9BT76 320 aa8.08□□□□□ -1.12
CLN6-217ENST00000636964 C22orf24Q9Y442 160 aa8.08□□□□□ -1.12
CLN6-217ENST00000636964 TRBV10-1A0A0K0K1A3 114 aa8.08□□□□□ -1.12
CLN6-217ENST00000636964 FAM222AQ5U5X8 452 aa8.08□□□□□ -1.12
CLN6-217ENST00000636964 PRSS2P07478 247 aa8.07□□□□□ -1.12
CLN6-217ENST00000636964 KRTAP10-11P60412 298 aa8.07□□□□□ -1.12
CLN6-217ENST00000636964 RPL18AQ02543 176 aaKnown RBP8.07□□□□□ -1.12
CLN6-217ENST00000636964 S100A7L2Q5SY68 101 aa8.07□□□□□ -1.12
CLN6-217ENST00000636964 CXCL5P42830 114 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 RBM3P98179 157 aaKnown RBP8.06□□□□□ -1.12
CLN6-217ENST00000636964 SDIM1Q6ZPB5 146 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 TRBV6-4A0A1B0GX49 114 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 NDUFC2-KCTD14E9PQ53 114 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 TIMM17BO60830 172 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 DAND5Q8N907 189 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 IGHV4-28A0A0C4DH34 117 aa8.06□□□□□ -1.12
CLN6-217ENST00000636964 ACYP1P07311 99 aa8.05□□□□□ -1.12
CLN6-217ENST00000636964 LINC00474Q9P2X8 69 aa8.05□□□□□ -1.12
CLN6-217ENST00000636964 A0A096LPF7 62 aa8.04□□□□□ -1.12
CLN6-217ENST00000636964 MIAQ16674 131 aa8.04□□□□□ -1.12
CLN6-217ENST00000636964 C5orf38Q86SI9 138 aa8.04□□□□□ -1.12
CLN6-217ENST00000636964 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
CLN6-217ENST00000636964 CELA1Q9UNI1 258 aa8.03□□□□□ -1.12
CLN6-217ENST00000636964 LINC00612Q8N6U2 182 aa8.03□□□□□ -1.12
CLN6-217ENST00000636964 TIMM21Q9BVV7 248 aa8.03□□□□□ -1.12
CLN6-217ENST00000636964 GYPEP15421 78 aa8.03□□□□□ -1.12
CLN6-217ENST00000636964 Q6ZRU5 148 aa8.03□□□□□ -1.12
CLN6-217ENST00000636964 EPM2AB3EWF7 344 aa8.02□□□□□ -1.13
CLN6-217ENST00000636964 NDUFA12Q9UI09 145 aa8.02□□□□□ -1.13
CLN6-217ENST00000636964 MPLKIPQ8TAP9 179 aa8.02□□□□□ -1.13
CLN6-217ENST00000636964 UBE2L6O14933 153 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 VPREB1P12018 145 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
CLN6-217ENST00000636964 Q8NAQ8 132 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 HTN3P15516 51 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 HIST1H4AP62805 103 aaKnown RBP8.01□□□□□ -1.13
CLN6-217ENST00000636964 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 C11orf68Q9H3H3 251 aaKnown RBP8.01□□□□□ -1.13
CLN6-217ENST00000636964 IGHV1-58A0A0C4DH39 117 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 COX6CP09669 75 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 DAD1P61803 113 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
CLN6-217ENST00000636964 LYRM9A8MSI8 78 aa8□□□□□ -1.13
CLN6-217ENST00000636964 COX6A2Q02221 97 aa8□□□□□ -1.13
CLN6-217ENST00000636964 VSIG2Q96IQ7 327 aa8□□□□□ -1.13
CLN6-217ENST00000636964 IGKV3OR2-268A0A0C4DH90 116 aa8□□□□□ -1.13
CLN6-217ENST00000636964 FAM218AQ96MZ4 157 aa8□□□□□ -1.13
CLN6-217ENST00000636964 PRO0255Q9UI72 69 aa8□□□□□ -1.13
CLN6-217ENST00000636964 PRB2P02812 416 aaPredicted RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms