RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 IGLV5-39A0A0G2JS06 123 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 SMIM1B2RUZ4 78 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 USP17L23D6RBM5 183 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 KRTDAPP60985 99 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
UPF3B-205ENST00000636792 TMEM170BQ5T4T1 132 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 C15orf56Q8N910 161 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 CDKN2A-AS1Q9UH64 79 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 HYDINQ4G0P3 5121 aa4.42□□□□□ -1.7
UPF3B-205ENST00000636792 KMT2CQ8NEZ4 4911 aaKnown RBP4.42□□□□□ -1.7
UPF3B-205ENST00000636792 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 PRSS2P07478 247 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 COX6A2Q02221 97 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 SPAG11BQ08648 103 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 RNF151Q2KHN1 245 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
UPF3B-205ENST00000636792 SACSQ9NZJ4 4579 aa4.4□□□□□ -1.7
UPF3B-205ENST00000636792 TRBV30A0A0K0K1B3 111 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 hDV102S1A0JD36 115 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 TMEM223A0PJW6 202 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 H0Y8G0 127 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 NDUFA1O15239 70 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 NMUP48645 174 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 ZC2HC1BQ5TFG8 222 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 C5orf38Q86SI9 138 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 ORAOV1Q8WV07 137 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 PLEKHB2Q96CS7 222 aa4.4□□□□□ -1.71
UPF3B-205ENST00000636792 LINC00587B1AMM8 73 aa4.39□□□□□ -1.71
UPF3B-205ENST00000636792 E9PLD3 99 aa4.39□□□□□ -1.71
UPF3B-205ENST00000636792 HERV-K104P63124 156 aa4.39□□□□□ -1.71
UPF3B-205ENST00000636792 COX7B2Q8TF08 81 aa4.39□□□□□ -1.71
UPF3B-205ENST00000636792 TMA7Q9Y2S6 64 aaKnown RBP4.39□□□□□ -1.71
UPF3B-205ENST00000636792 A0A1B0GVY2 172 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 HSBP1L1C9JCN9 74 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 LEPROTO15243 131 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 GCSHP23434 173 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 CKS1BP61024 79 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 SYCNQ0VAF6 134 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 COX17Q14061 63 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 WFDC2Q14508 124 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 KIAA0087Q14695 138 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 JOSD1Q15040 202 aaPredicted RBP4.38□□□□□ -1.71
UPF3B-205ENST00000636792 C6orf226Q5I0X4 101 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 C9orf163Q8N9P6 203 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 CARD19Q96LW7 228 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 CAMK2N2Q96S95 79 aa4.38□□□□□ -1.71
UPF3B-205ENST00000636792 FRAS1Q86XX4 4008 aa4.37□□□□□ -1.71
UPF3B-205ENST00000636792 IGLV5-52A0A0A0MRZ9 124 aa4.37□□□□□ -1.71
UPF3B-205ENST00000636792 SPINK8P0C7L1 97 aa4.37□□□□□ -1.71
UPF3B-205ENST00000636792 TLX1NBP0CAT3 122 aa4.37□□□□□ -1.71
UPF3B-205ENST00000636792 LINC00474Q9P2X8 69 aa4.37□□□□□ -1.71
UPF3B-205ENST00000636792 MYMXA0A1B0GTQ4 84 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 J3QQQ9 107 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 LECT2O14960 151 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 LGALS3P17931 250 aaKnown RBP4.36□□□□□ -1.71
UPF3B-205ENST00000636792 HIGD2BQ4VC39 106 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 ZNF625Q96I27 306 aaPredicted RBP4.36□□□□□ -1.71
UPF3B-205ENST00000636792 PMCHL2Q9BQD1 86 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 TOMM7Q9P0U1 55 aa4.36□□□□□ -1.71
UPF3B-205ENST00000636792 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.35□□□□□ -1.71
UPF3B-205ENST00000636792 LOC107984640A0A0U1RRK4 108 aa4.35□□□□□ -1.71
UPF3B-205ENST00000636792 SCGB1D1O95968 90 aa4.35□□□□□ -1.71
UPF3B-205ENST00000636792 Q6ZRU5 148 aa4.35□□□□□ -1.71
UPF3B-205ENST00000636792 NDUFC2-KCTD14E9PQ53 114 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 TIMM17BO60830 172 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 SMIM6P0DI80 62 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
UPF3B-205ENST00000636792 Q6ZSA8 131 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 PPDPFQ9H3Y8 114 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 NDUFA12Q9UI09 145 aa4.34□□□□□ -1.71
UPF3B-205ENST00000636792 C16orf90A8MZG2 172 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 PYY3Q5JQD4 70 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 Q6ZVH6 145 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 COPS9Q8WXC6 57 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 C6orf48Q9UBA6 75 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 ERG28Q9UKR5 140 aa4.33□□□□□ -1.72
UPF3B-205ENST00000636792 RYR3Q15413 4870 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 ZNF815PA8K554 130 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 DLEU1O43261 78 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 TSPEAR-AS2P59090 65 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 S100A12P80511 92 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 C2orf82Q6UX34 121 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 SDIM1Q6ZPB5 146 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 STPG4Q8N801 248 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 DNAH17Q9UFH2 4485 aa4.32□□□□□ -1.72
UPF3B-205ENST00000636792 A0A0J9YXY3 114 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 TMEM238C9JI98 176 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 MEIG1Q5JSS6 88 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 BOD1L2Q8IYS8 172 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 ATOH7Q8N100 152 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
UPF3B-205ENST00000636792 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 IGKV2D-26A0A0A0MRZ7 120 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 LOC107984156A0A0G2JMH3 177 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 CDK2AP2O75956 126 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 COX8AP10176 69 aa4.3□□□□□ -1.72
UPF3B-205ENST00000636792 RPL18AQ02543 176 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms