RNA–Protein interactions for RNA: ENST00000635273.1

SMARCA2-238, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 672 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-238	ENST00000635273	OR2T35	Q8NGX2	323 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	ATP6V0E2	Q8NHE4	81 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	DEFB104A	Q8WTQ1	72 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	DNAJC30	Q96LL9	226 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	PRADC1	Q9BSG0	188 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	SMIM3	Q9BZL3	60 aa		3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	WDR61	Q9GZS3	305 aa	Known RBP	3.16	□□□□□ -1.9
SMARCA2-238	ENST00000635273	TRAV21	A0A0B4J279	112 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	C17orf112	F2Z3M2	114 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	G0S2	P27469	103 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ZNF80	P51504	273 aa	Predicted RBP	3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TDRG1	Q3Y452	100 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	LELP1	Q5T871	98 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	OTOR	Q9NRC9	128 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273	VPS13B	Q7Z7G8	4022 aa		3.15	□□□□□ -1.91
SMARCA2-238	ENST00000635273		A0A1B0GV72	72 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TRBV6-4	A0A1B0GX49	114 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	GRIFIN	A4D1Z8	144 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	SDHAF1	A6NFY7	115 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	APOM	O95445	188 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	C1QB	P02746	253 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	RHOH	Q15669	191 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	BATF	Q16520	125 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	KHDC3L	Q587J8	217 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	FAM74A1	Q5RGS3	127 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	LENEP	Q9Y5L5	61 aa		3.14	□□□□□ -1.91
SMARCA2-238	ENST00000635273	UBE2L6	O14933	153 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ZNF73	O43830	326 aa	Predicted RBP	3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	RNASE3	P12724	160 aa	Known RBP	3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	RAB5B	P61020	215 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273		Q6ZSA8	131 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	DAND5	Q8N907	189 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	PPP1R1C	Q8WVI7	109 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	C20orf166-AS1	Q96NR2	134 aa		3.13	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TMEM262	E9PQX1	116 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	MPC2	O95563	127 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TCRA	P04437	139 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ARL14EPL	P0DKL9	152 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	MGST1	P10620	155 aa	Known RBP	3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	S100A4	P26447	101 aa	Known RBP	3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ACOT6	Q3I5F7	207 aa	Predicted RBP	3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	FAM74A4	Q5TZK3	123 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273	HSPB11	Q9Y547	144 aa		3.12	□□□□□ -1.91
SMARCA2-238	ENST00000635273		A0A087WWC5	75 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273		A0A087WX48	190 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273		A8MWV9	139 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	INMT-MINDY4	F8WBC2	141 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	COX7A2L	O14548	114 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	KRTAP10-4	P60372	401 aa	Predicted RBP	3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	C2orf91	Q6ZV80	131 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	C5orf17	Q8NAS9	161 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	DPH3	Q96FX2	82 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	CCDC32	Q9BV29	185 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	SH3BGRL3	Q9H299	93 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	EPDR1	Q9UM22	224 aa		3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	LRP1	Q07954	4544 aa	Known RBP	3.11	□□□□□ -1.91
SMARCA2-238	ENST00000635273	DNAH8	Q96JB1	4490 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TMSB15B	A0A087X1C1	80 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	FABP5P3	A8MUU1	101 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273		H3BVH4	76 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	IFNA7	P01567	189 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ARMS2	P0C7Q2	107 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	GCHFR	P30047	84 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ASIP	P42127	132 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	RPL37A	P61513	92 aa	Known RBP	3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	RPL19	P84098	196 aa	Known RBP	3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	SFRP2	Q96HF1	295 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	SPANXA1	Q9NS26	97 aa		3.1	□□□□□ -1.91
SMARCA2-238	ENST00000635273	LINC00694	P0DN24	101 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	GZMB	P10144	247 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	SCGB1A1	P11684	91 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	CRIP1	P50238	77 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	DEFA3	P59666	94 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ENHO	Q6UWT2	76 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	ARL2-SNX15	V9GYD0	113 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	UBR4	Q5T4S7	5183 aa		3.09	□□□□□ -1.91
SMARCA2-238	ENST00000635273	MUC21	A0A0G2JKD1	596 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MUC21	A0A140T8X8	626 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273		H3BPC8	53 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ANG	P03950	147 aa	Known RBP	3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	RAB5C	P51148	216 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273		Q0VG73	95 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ELOB	Q15370	118 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	CLPSL2	Q6UWE3	100 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	S100Z	Q8WXG8	99 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	ZC2HC1A	Q96GY0	325 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	IL36B	Q9NZH7	164 aa		3.08	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TRBV7-3	A0A075B6L6	115 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TRBV6-8	A0A0A6YYG3	113 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	CRP	P02741	224 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TPT1	P13693	172 aa	Known RBP	3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	UBE2D3	P61077	147 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	UBE2D2	P62837	147 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MEF2B	Q02080	365 aa	Predicted RBP	3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273		Q5BKY6	102 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	MIEN1	Q9BRT3	115 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TMEM167B	Q9NRX6	74 aa		3.07	□□□□□ -1.92
SMARCA2-238	ENST00000635273		A0A1W2PRE2	83 aa		3.06	□□□□□ -1.92
SMARCA2-238	ENST00000635273	TSTD3	H0UI37	97 aa		3.06	□□□□□ -1.92

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms