RNA–Protein interactions for RNA: ENST00000635120.1

CSMD1-218, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CSMD1, Length 11,737 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-218ENST00000635120 C9orf116Q5BN46 136 aaPredicted RBP6.66□□□□□ -1.34
CSMD1-218ENST00000635120 ESRGQ1W209 222 aa6.66□□□□□ -1.34
CSMD1-218ENST00000635120 SMIM26A0A096LP01 95 aa6.65□□□□□ -1.34
CSMD1-218ENST00000635120 NANOS2P60321 138 aaKnown RBP6.65□□□□□ -1.34
CSMD1-218ENST00000635120 Q8IZM0 81 aa6.65□□□□□ -1.34
CSMD1-218ENST00000635120 UBE2D2P62837 147 aa6.65□□□□□ -1.34
CSMD1-218ENST00000635120 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.65□□□□□ -1.34
CSMD1-218ENST00000635120 Q6ZVQ6 151 aa6.65□□□□□ -1.34
CSMD1-218ENST00000635120 ZNF702PQ9H963 129 aa6.65□□□□□ -1.34
CSMD1-218ENST00000635120 ITPR3Q14573 2671 aa6.65□□□□□ -1.35
CSMD1-218ENST00000635120 TRAV7A0A075B6U4 112 aa6.64□□□□□ -1.35
CSMD1-218ENST00000635120 NTM-AS1Q6ZSK4 140 aa6.64□□□□□ -1.35
CSMD1-218ENST00000635120 LINC00474Q9P2X8 69 aa6.64□□□□□ -1.35
CSMD1-218ENST00000635120 CYSRT1A8MQ03 144 aa6.64□□□□□ -1.35
CSMD1-218ENST00000635120 Q8N814 137 aa6.64□□□□□ -1.35
CSMD1-218ENST00000635120 POLR2KP53803 58 aaKnown RBP6.64□□□□□ -1.35
CSMD1-218ENST00000635120 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
CSMD1-218ENST00000635120 CHD6Q8TD26 2715 aa6.63□□□□□ -1.35
CSMD1-218ENST00000635120 C11orf71Q6IPW1 123 aa6.63□□□□□ -1.35
CSMD1-218ENST00000635120 CNFNQ9BYD5 112 aa6.63□□□□□ -1.35
CSMD1-218ENST00000635120 PSPHP1O15172 72 aa6.63□□□□□ -1.35
CSMD1-218ENST00000635120 LY6G6DO95868 133 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 NOTCH1P46531 2555 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 CIRBP-AS1Q8TBR5 109 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 CDC42SE2Q9NRR3 84 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 PRR3P79522 188 aaKnown RBP6.62□□□□□ -1.35
CSMD1-218ENST00000635120 ZNF843Q8N446 348 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 LY6G6CO95867 125 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 TRBV7-6A0A0J9YX20 115 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 C1orf137Q5JT78 98 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 RETNLBQ9BQ08 111 aa6.62□□□□□ -1.35
CSMD1-218ENST00000635120 Q8N6K4 173 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 A0A087WYN8 130 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 TRBV10-3A0A0K0K1G6 114 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 CRIP2P52943 208 aaPredicted RBP6.61□□□□□ -1.35
CSMD1-218ENST00000635120 NBEAL1Q6ZS30 2694 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 IGIPA6NJ69 53 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 UNQ6190/PRO20217Q6UXQ8 127 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 REG3GQ6UW15 175 aa6.61□□□□□ -1.35
CSMD1-218ENST00000635120 X6R8D5 127 aa6.6□□□□□ -1.35
CSMD1-218ENST00000635120 LINC00242Q5T6M2 205 aa6.6□□□□□ -1.35
CSMD1-218ENST00000635120 LINC00208Q96KT6 92 aa6.6□□□□□ -1.35
CSMD1-218ENST00000635120 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
CSMD1-218ENST00000635120 PRYO14603 147 aa6.6□□□□□ -1.35
CSMD1-218ENST00000635120 A0A087WVE0 104 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 COX6A2Q02221 97 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 MAP1AP78559 2803 aaPredicted RBP6.59□□□□□ -1.35
CSMD1-218ENST00000635120 LINC00310P59036 64 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 TSPEAR-AS2P59090 65 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 C4orf26Q17RF5 130 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
CSMD1-218ENST00000635120 MRGPRG-AS1Q2M3A8 158 aa6.59□□□□□ -1.36
CSMD1-218ENST00000635120 MUC7Q8TAX7 377 aa6.59□□□□□ -1.36
CSMD1-218ENST00000635120 HELZ2Q9BYK8 2649 aaKnown RBP6.59□□□□□ -1.36
CSMD1-218ENST00000635120 RPL28P46779 137 aaKnown RBP6.58□□□□□ -1.36
CSMD1-218ENST00000635120 ADAMTSL4-AS1Q5T5F5 129 aa6.58□□□□□ -1.36
CSMD1-218ENST00000635120 STAB1Q9NY15 2570 aa6.58□□□□□ -1.36
CSMD1-218ENST00000635120 LINC01547P58512 204 aaPredicted RBP6.58□□□□□ -1.36
CSMD1-218ENST00000635120 SMIM1B2RUZ4 78 aa6.57□□□□□ -1.36
CSMD1-218ENST00000635120 EDN2P20800 178 aa6.57□□□□□ -1.36
CSMD1-218ENST00000635120 EP400Q96L91 3159 aa6.57□□□□□ -1.36
CSMD1-218ENST00000635120 EGFEM1PQ0D2K5 195 aa6.56□□□□□ -1.36
CSMD1-218ENST00000635120 CRYGAP11844 174 aa6.56□□□□□ -1.36
CSMD1-218ENST00000635120 Q8N3U1 123 aa6.56□□□□□ -1.36
CSMD1-218ENST00000635120 SBSPONQ8IVN8 264 aa6.56□□□□□ -1.36
CSMD1-218ENST00000635120 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 SPINK1P00995 79 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 Q9BRP9 147 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 CHCHD7Q9BUK0 85 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 BEAN1Q3B7T3 259 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 H0Y9P7 68 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 C6orf223Q8N319 242 aa6.55□□□□□ -1.36
CSMD1-218ENST00000635120 TEX15Q9BXT5 2789 aa6.54□□□□□ -1.36
CSMD1-218ENST00000635120 TRBV7-7A0A0K0K1E9 115 aa6.54□□□□□ -1.36
CSMD1-218ENST00000635120 SERTAD4-AS1Q5TG53 156 aa6.54□□□□□ -1.36
CSMD1-218ENST00000635120 PRO0628Q9UI54 55 aa6.54□□□□□ -1.36
CSMD1-218ENST00000635120 IGLV5-52A0A0A0MRZ9 124 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 OXLD1Q5BKU9 147 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 IGLV4-60A0A075B6I1 120 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 LINC01556Q5JQF7 62 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 LINC00575Q6W349 94 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 COL6A5A8TX70 2615 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 ODF3L2Q3SX64 289 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 ZNF580Q9UK33 172 aa6.53□□□□□ -1.36
CSMD1-218ENST00000635120 A8MTW9 85 aa6.52□□□□□ -1.37
CSMD1-218ENST00000635120 CDIP1Q9H305 208 aa6.52□□□□□ -1.37
CSMD1-218ENST00000635120 DEFB116Q30KQ4 102 aa6.52□□□□□ -1.37
CSMD1-218ENST00000635120 GCN1Q92616 2671 aaKnown RBP6.52□□□□□ -1.37
CSMD1-218ENST00000635120 NUPR2A6NF83 97 aa6.52□□□□□ -1.37
CSMD1-218ENST00000635120 BAHCC1Q9P281 2608 aa6.51□□□□□ -1.37
CSMD1-218ENST00000635120 URB1-AS1Q96HZ7 61 aa6.51□□□□□ -1.37
CSMD1-218ENST00000635120 AMELXQ99217 191 aa6.51□□□□□ -1.37
CSMD1-218ENST00000635120 HCG22E2RYF7 251 aa6.51□□□□□ -1.37
CSMD1-218ENST00000635120 TEP1Q99973 2627 aaKnown RBP6.51□□□□□ -1.37
CSMD1-218ENST00000635120 TMEM254Q8TBM7 123 aa6.5□□□□□ -1.37
CSMD1-218ENST00000635120 A0A087WSZ3 146 aa6.5□□□□□ -1.37
CSMD1-218ENST00000635120 BRI3O95415 125 aa6.5□□□□□ -1.37
CSMD1-218ENST00000635120 CDSNQ15517 529 aa6.5□□□□□ -1.37
CSMD1-218ENST00000635120 SRCAPQ6ZRS2 3230 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms