RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 S100A2P29034 98 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 RPL12P30050 165 aaKnown RBP1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 ASIPP42127 132 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 CDC34P49427 236 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 SAPCD1Q5SSQ6 148 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 OR2T35Q8NGX2 323 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 OR10AG1Q8NH19 301 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 UBE2WQ96B02 151 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 HYLS1Q96M11 299 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 AQP10Q96PS8 301 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 TCEAL7Q9BRU2 100 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 ZNF471Q9BX82 626 aaPredicted RBP1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 SH3BGRL3Q9H299 93 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 CRCT1Q9UGL9 99 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 EPDR1Q9UM22 224 aa1.3□□□□□ -2.2
SMARCB1-208ENST00000634926 IGLV10-54A0A075B6I4 117 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 IGHV3-64A0A075B6Q5 118 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A087WX48 190 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A096LNI7 61 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A0D9SG52 128 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 CCDC160A6NGH7 325 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 FABP5P3A8MUU1 101 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 B4DEV8 164 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 M0QY20 66 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 HMGB3O15347 200 aaKnown RBP1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 ARMS2P0C7Q2 107 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 LINC00614P0C842 121 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 IGLC6P0CF74 106 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 ATP6V0CP27449 155 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 RAB4BP61018 213 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 PKIAP61925 76 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 SERF2P84101 59 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 SMAGPQ0VAQ4 97 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 ELOBQ15370 118 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 PDZD11Q5EBL8 140 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 FAM74A1Q5RGS3 127 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 SPINK6Q6UWN8 80 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 SCGB1D4Q6XE38 83 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 ADM2Q7Z4H4 148 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 CMTM2Q8TAZ6 248 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 HIST1H2BAQ96A08 127 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 CNFNQ9BYD5 112 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 TMEM167BQ9NRX6 74 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 TNFSF18Q9UNG2 199 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 ZFP30Q9Y2G7 519 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 PHLDA3Q9Y5J5 127 aa1.29□□□□□ -2.2
SMARCB1-208ENST00000634926 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV20OR9-2A0A075B6H5 130 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV24-1A0A075B6N3 115 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 A0A0B4J2C4 111 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 CTXND1A0A1B0GTU2 59 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 GRIFINA4D1Z8 144 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 C19orf71A6NCJ1 209 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 M0R036 132 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 M0R381 172 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 CRPP02741 224 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 ANGP03950 147 aaKnown RBP1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 GZMBP10144 247 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 SULT1A2P50226 295 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 COX6A2Q02221 97 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 LGALSLQ3ZCW2 172 aaPredicted RBP1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 TMEM97Q5BJF2 176 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 Q5BKY6 102 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 C10orf91Q5T1B1 145 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 FAM74A4Q5TZK3 123 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 CLPSL2Q6UWE3 100 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 PACRGQ96M98 296 aaPredicted RBP1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 AP1S3Q96PC3 154 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 GNB1LQ9BYB4 327 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 SMIM3Q9BZL3 60 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 NKX6-2Q9C056 277 aaPredicted RBP1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 R4GN34 69 aa1.28□□□□□ -2.2
SMARCB1-208ENST00000634926 TRBV25-1A0A075B6N4 114 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 IGHV1-24A0A0C4DH33 117 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 MAP1LC3B2A6NCE7 125 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 A6NED7 52 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 INMT-MINDY4F8WBC2 141 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 SSNA1O43805 119 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 TPT1P13693 172 aaKnown RBP1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 S100A4P26447 101 aaKnown RBP1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 ZNF56Q15929 161 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 AMMECR1LQ6DCA0 310 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 RPL7L1Q6DKI1 246 aaKnown RBP1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 DERL1Q9BUN8 251 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 MAP1LC3BQ9GZQ8 125 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 EIF5A2Q9GZV4 153 aaKnown RBP1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 PSORS1C2Q9UIG4 136 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 ALG5Q9Y673 324 aa1.27□□□□□ -2.21
SMARCB1-208ENST00000634926 TMSB15BA0A087X1C1 80 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 IGKV2-24A0A0C4DH68 120 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 MUC21A0A140T8X8 626 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 A0A1B0GU33 70 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 A0A1W2PNN7 141 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 NCR2O95944 276 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 ESDP10768 282 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 HRES1P13985 223 aa1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 ZNF25P17030 456 aaPredicted RBP1.26□□□□□ -2.21
SMARCB1-208ENST00000634926 RPL35P42766 123 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms