RNA–Protein interactions for RNA: ENST00000629912.1

NEK3-211, Transcript of NIMA related kinase 3, humanhuman

TSL 5 BASIC

Gene NEK3, Length 141 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-211ENST00000629912 MAST4O15021 2626 aa3.79□□□□□ -1.8
NEK3-211ENST00000629912 A0A0J9YWU9 116 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 COX6CP09669 75 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 CXCL5P42830 114 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 NPC2P61916 151 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 COX17Q14061 63 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 ENHOQ6UWT2 76 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 Q6ZTC4 211 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 MIR7-3HGQ8N6C7 128 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 DAND5Q8N907 189 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 COL6A5A8TX70 2615 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 ANK2Q01484 3957 aa3.78□□□□□ -1.8
NEK3-211ENST00000629912 HUWE1Q7Z6Z7 4374 aaKnown RBP3.78□□□□□ -1.8
NEK3-211ENST00000629912 DEFB131BA0A096LNP1 70 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 TRAV13-2A0A0B4J235 113 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 A0A0U1RRA0 63 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 K7EIL1 84 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 LCE2BO14633 110 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 TRIAP1O43715 76 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 SMCPP49901 116 aaPredicted RBP3.77□□□□□ -1.81
NEK3-211ENST00000629912 CCL18P55774 89 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 LINC00158P58513 81 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 NANOS2P60321 138 aaKnown RBP3.77□□□□□ -1.81
NEK3-211ENST00000629912 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 Q1RN00 199 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 ESRGQ1W209 222 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 Q8N3U1 123 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 MUC7Q8TAX7 377 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 KLK12Q9UKR0 248 aa3.77□□□□□ -1.81
NEK3-211ENST00000629912 TRAV10A0A0B4J240 114 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 GAGE12HA6NDE8 117 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 H7C2G1 150 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 MALP21145 153 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 RPL13AP40429 203 aaKnown RBP3.76□□□□□ -1.81
NEK3-211ENST00000629912 CKS1BP61024 79 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 CFAP161Q6P656 301 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 KRTAP26-1Q6PEX3 210 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 CLPSL2Q6UWE3 100 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 C15orf53Q8NAA6 179 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 SND1-IT1Q9HBX3 110 aa3.76□□□□□ -1.81
NEK3-211ENST00000629912 IGLV10-54A0A075B6I4 117 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 GVQW2A0A096LPI5 108 aaPredicted RBP3.75□□□□□ -1.81
NEK3-211ENST00000629912 NDUFC2O95298 119 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 PFN2P35080 140 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 RPL28P46779 137 aaKnown RBP3.75□□□□□ -1.81
NEK3-211ENST00000629912 ETDBQ3ZM63 59 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 LINC01620Q4KN68 170 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 DEFB121Q5J5C9 76 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 LINC01556Q5JQF7 62 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 CBY1Q9Y3M2 126 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 DNAH9Q9NYC9 4486 aa3.75□□□□□ -1.81
NEK3-211ENST00000629912 IGKV2-28A0A075B6P5 120 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 TRBV10-2A0A0K0K1G8 114 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 F8WDY8 70 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 J3QR89 54 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 LST1O00453 97 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 SLC25A20O43772 301 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 IGKV2D-28P01615 120 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 CRPP02741 224 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 DNAH10OSP0CZ25 163 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 C2orf82Q6UX34 121 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 TEN1Q86WV5 123 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 WFDC10BQ8IUB3 73 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 NTN5Q8WTR8 489 aaPredicted RBP3.74□□□□□ -1.81
NEK3-211ENST00000629912 UBE2WQ96B02 151 aa3.74□□□□□ -1.81
NEK3-211ENST00000629912 TENM3Q9P273 2699 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 C9JAW5 83 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 H0YGX0 51 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 PRB2P02812 416 aaPredicted RBP3.73□□□□□ -1.81
NEK3-211ENST00000629912 SPAG11BQ08648 103 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 UNQ6190/PRO20217Q6UXQ8 127 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 ANKRD29Q8N6D5 301 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 LINC00337Q8N6G1 96 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 PPDPFLQ8WWR9 84 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 C2orf48Q96LS8 159 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 CARD19Q96LW7 228 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 MDFIQ99750 246 aa3.73□□□□□ -1.81
NEK3-211ENST00000629912 NOTCH1P46531 2555 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 DYNC2H1Q8NCM8 4307 aaKnown RBP3.72□□□□□ -1.81
NEK3-211ENST00000629912 H3BT86 120 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 TRACP01848 142 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 RNF151Q2KHN1 245 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 C10orf25Q5T742 122 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 C6orf223Q8N319 242 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 MTURNQ8N3F0 131 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 MRAPQ8TCY5 172 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 CLEC2BQ92478 149 aa3.72□□□□□ -1.81
NEK3-211ENST00000629912 NBEAL1Q6ZS30 2694 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 C9orf116Q5BN46 136 aaPredicted RBP3.71□□□□□ -1.82
NEK3-211ENST00000629912 SMIM11BQ8TCY0 68 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 VPS25Q9BRG1 176 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 UPK3BQ9BT76 320 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 C1orf43Q9BWL3 253 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 LINC00588Q9Y4M8 146 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 DNAH1Q9P2D7 4330 aa3.71□□□□□ -1.82
NEK3-211ENST00000629912 ZNF561-AS1K7EIQ3 104 aa3.7□□□□□ -1.82
NEK3-211ENST00000629912 C15orf56Q8N910 161 aa3.7□□□□□ -1.82
NEK3-211ENST00000629912 B9D2Q9BPU9 175 aa3.7□□□□□ -1.82
NEK3-211ENST00000629912 TMEM126AQ9H061 195 aa3.7□□□□□ -1.82
NEK3-211ENST00000629912 C6orf48Q9UBA6 75 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms