RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 NOP10Q9NPE3 64 aaKnown RBP3.32□□□□□ -1.88
LINC00550-201ENST00000629293 FAT1Q14517 4588 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 A8MWV9 139 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 ATP5G1P05496 136 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 ZNF22P17026 224 aaPredicted RBP3.32□□□□□ -1.88
LINC00550-201ENST00000629293 CRYBA4P53673 196 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 C15orf53Q8NAA6 179 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 OPRPNQ99935 248 aaPredicted RBP3.32□□□□□ -1.88
LINC00550-201ENST00000629293 PRO0461Q9UI25 63 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 MYCBP2O75592 4640 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 LEPROTO15243 131 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 INSP01308 110 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV3-30P01768 117 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV3-30-5P0DP03 117 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 HAMPP81172 84 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 SLC25A29Q8N8R3 303 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 LINC00588Q9Y4M8 146 aa3.32□□□□□ -1.88
LINC00550-201ENST00000629293 TRAV26-1A0A087WT03 109 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 J3QQQ9 107 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 CFAP126Q5VTH2 177 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 EPM2AB3EWF7 344 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 CDK2AP2O75956 126 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 KRTAP15-1Q3LI76 137 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 TMEM170BQ5T4T1 132 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 SCGB1D4Q6XE38 83 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 CHCHD7Q9BUK0 85 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 IGLV5-37A0A075B6J1 123 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 F8W1H4 67 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 RS1O15537 224 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 TSPAN13O95857 204 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV3-53P01767 116 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 SMR3BP02814 79 aaPredicted RBP3.31□□□□□ -1.88
LINC00550-201ENST00000629293 UBE2D3P61077 147 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 UBE2D2P62837 147 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 MRPS36P82909 103 aaKnown RBP3.31□□□□□ -1.88
LINC00550-201ENST00000629293 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
LINC00550-201ENST00000629293 A0A0J9YXV3 536 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 LINC01620Q4KN68 170 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 DNAJC30Q96LL9 226 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 VPS25Q9BRG1 176 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 Q9UF83 564 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 A0A096LPF7 62 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV3-73A0A0B4J1V6 119 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 LYRM9A8MSI8 78 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 LGALS3P17931 250 aaKnown RBP3.3□□□□□ -1.88
LINC00550-201ENST00000629293 VCX2Q9H322 139 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 SPANXA1Q9NS26 97 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 UBE2D4Q9Y2X8 147 aa3.3□□□□□ -1.88
LINC00550-201ENST00000629293 IGLV9-49A0A0B4J1Y8 123 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 H3BMG7 143 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 CFC1BP0CG36 223 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 CFC1P0CG37 223 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 WFDC2Q14508 124 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 FAM218AQ96MZ4 157 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 TNFRSF18Q9Y5U5 241 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 TTC32Q5I0X7 151 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 LITAFQ99732 161 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 MRPL16Q9NX20 251 aaKnown RBP3.29□□□□□ -1.88
LINC00550-201ENST00000629293 TRGV2A0A075B6R0 118 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 TINCRA0A1B0GVN0 87 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 INAFM2P0DMQ5 153 aa3.29□□□□□ -1.88
LINC00550-201ENST00000629293 IGLV5-45A0A087WSX0 123 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 ESRGQ1W209 222 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 TIMM21Q9BVV7 248 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 A0A0B4J2C4 111 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 A0A0J9YXY3 114 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV3-30-3P0DP02 117 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 FHL2Q14192 279 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 Q6ZUT4 128 aa3.28□□□□□ -1.88
LINC00550-201ENST00000629293 IGHV1-58A0A0C4DH39 117 aa3.28□□□□□ -1.89
LINC00550-201ENST00000629293 FAM19A3Q7Z5A8 133 aa3.28□□□□□ -1.89
LINC00550-201ENST00000629293 ATP6V0E2Q8NHE4 81 aa3.28□□□□□ -1.89
LINC00550-201ENST00000629293 TMEM263Q8WUH6 116 aaKnown RBP3.28□□□□□ -1.89
LINC00550-201ENST00000629293 C16orf74Q96GX8 76 aa3.28□□□□□ -1.89
LINC00550-201ENST00000629293 VSIG2Q96IQ7 327 aa3.28□□□□□ -1.89
LINC00550-201ENST00000629293 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.27□□□□□ -1.89
LINC00550-201ENST00000629293 TRGV1A0A0A0MS02 117 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 IGKV2-29A2NJV5 120 aaPredicted RBP3.27□□□□□ -1.89
LINC00550-201ENST00000629293 TMEM238C9JI98 176 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 APOMO95445 188 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 COTL1Q14019 142 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 LYRM7Q5U5X0 104 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 Q6ZTI0 123 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 SPANXDQ9BXN6 97 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 SPANXCQ9NY87 97 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 PRO1854Q9UHT4 67 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 TRAV8-3A0A0A6YYJ7 113 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 PLAC8L1A1L4L8 177 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 IGHV3-33P01772 117 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 ETDBQ3ZM63 59 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
LINC00550-201ENST00000629293 Q5VSD8 79 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 SH2D6Q7Z4S9 175 aa3.27□□□□□ -1.89
LINC00550-201ENST00000629293 TRAV4A0A0B4J268 109 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 IGHV3-38A0A0C4DH36 116 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 TRBV10-1A0A0K0K1A3 114 aa3.26□□□□□ -1.89
LINC00550-201ENST00000629293 TCL1BO95988 128 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms