RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
TCF4-260ENST00000627685 LOC107984640A0A0U1RRK4 108 aa4.72□□□□□ -1.65
TCF4-260ENST00000627685 PRR3P79522 188 aaKnown RBP4.72□□□□□ -1.65
TCF4-260ENST00000627685 C2orf66Q6UXQ4 117 aa4.72□□□□□ -1.65
TCF4-260ENST00000627685 OR10D4PQ8NGN7 298 aa4.72□□□□□ -1.65
TCF4-260ENST00000627685 C6orf48Q9UBA6 75 aa4.72□□□□□ -1.65
TCF4-260ENST00000627685 IFITM10A6NMD0 228 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 K7EMI3 77 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 RAB5AP20339 215 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 SPAG11BQ08648 103 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 TOMM6Q96B49 74 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 CAMK2N2Q96S95 79 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 GNB1LQ9BYB4 327 aa4.71□□□□□ -1.66
TCF4-260ENST00000627685 MRPL35Q9NZE8 188 aaKnown RBP4.71□□□□□ -1.66
TCF4-260ENST00000627685 IGLV5-45A0A087WSX0 123 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 TLX1NBP0CAT3 122 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
TCF4-260ENST00000627685 RHEBQ15382 184 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 UNQ6190/PRO20217Q6UXQ8 127 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 Q6ZRP5 223 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 LINC01561Q8N1V8 128 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 ORAOV1Q8WV07 137 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 TMEM141Q96I45 108 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 CYSLTR1Q9Y271 337 aa4.7□□□□□ -1.66
TCF4-260ENST00000627685 TGIF2-C20orf24A0A0A6YYL0 155 aa4.69□□□□□ -1.66
TCF4-260ENST00000627685 FAM168BA1KXE4 195 aa4.69□□□□□ -1.66
TCF4-260ENST00000627685 SPINK6Q6UWN8 80 aa4.69□□□□□ -1.66
TCF4-260ENST00000627685 C2orf82Q6UX34 121 aa4.69□□□□□ -1.66
TCF4-260ENST00000627685 TIMM17AQ99595 171 aa4.69□□□□□ -1.66
TCF4-260ENST00000627685 NXT2Q9NPJ8 142 aaKnown RBP4.69□□□□□ -1.66
TCF4-260ENST00000627685 PRYO14603 147 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 GAGE2BQ13066 116 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 ORMDL2Q53FV1 153 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 C9orf129Q5T035 196 aaKnown RBP4.68□□□□□ -1.66
TCF4-260ENST00000627685 C18orf32Q8TCD1 76 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 LINC01600Q96MT4 127 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 UBR4Q5T4S7 5183 aa4.68□□□□□ -1.66
TCF4-260ENST00000627685 SMIM1B2RUZ4 78 aa4.67□□□□□ -1.66
TCF4-260ENST00000627685 NDUFA1O15239 70 aa4.67□□□□□ -1.66
TCF4-260ENST00000627685 G0S2P27469 103 aa4.67□□□□□ -1.66
TCF4-260ENST00000627685 C9orf116Q5BN46 136 aaPredicted RBP4.67□□□□□ -1.66
TCF4-260ENST00000627685 TEX43Q6ZNM6 134 aa4.67□□□□□ -1.66
TCF4-260ENST00000627685 TRBV30A0A0K0K1B3 111 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 MT-ND6P03923 174 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 PDZD11Q5EBL8 140 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 PAPPA-AS1Q5QFB9 102 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 Q6ZN92 141 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 PHF5AQ7RTV0 110 aaKnown RBP4.66□□□□□ -1.66
TCF4-260ENST00000627685 ERASQ7Z444 233 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 C2orf88Q9BSF0 95 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 RPS10P5Q9NQ39 176 aa4.66□□□□□ -1.66
TCF4-260ENST00000627685 LINC01549A6NIU2 74 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 SEC11AP67812 179 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 LRP2P98164 4655 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 RPL18AQ02543 176 aaKnown RBP4.65□□□□□ -1.67
TCF4-260ENST00000627685 REG3GQ6UW15 175 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 MPLKIPQ8TAP9 179 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 VCX2Q9H322 139 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 CST9LQ9H4G1 147 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 PSORS1C2Q9UIG4 136 aa4.65□□□□□ -1.67
TCF4-260ENST00000627685 IGLV5-39A0A0G2JS06 123 aa4.64□□□□□ -1.67
TCF4-260ENST00000627685 APOC3P02656 99 aa4.64□□□□□ -1.67
TCF4-260ENST00000627685 COX19Q49B96 90 aa4.64□□□□□ -1.67
TCF4-260ENST00000627685 CBLN2Q8IUK8 224 aa4.64□□□□□ -1.67
TCF4-260ENST00000627685 Q8IZM0 81 aa4.64□□□□□ -1.67
TCF4-260ENST00000627685 TINCRA0A1B0GVN0 87 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 NDUFC2-KCTD14E9PQ53 114 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 KRTAP1-4P0C5Y4 121 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 IGLC3P0DOY3 106 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 S100PP25815 95 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 HERVK_113P63121 156 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 PMCHL1Q16048 86 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 Q8NDZ9 215 aa4.63□□□□□ -1.67
TCF4-260ENST00000627685 PACRGQ96M98 296 aaPredicted RBP4.63□□□□□ -1.67
TCF4-260ENST00000627685 FABP9Q0Z7S8 132 aa4.62□□□□□ -1.67
TCF4-260ENST00000627685 SVBPQ8N300 66 aa4.62□□□□□ -1.67
TCF4-260ENST00000627685 SCGB3A1Q96QR1 104 aa4.62□□□□□ -1.67
TCF4-260ENST00000627685 IGKV2D-30A0A075B6S6 120 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 C11orf86A6NJI1 115 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 SNAPINO95295 136 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 PRSS2P07478 247 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 ZNF22P17026 224 aaPredicted RBP4.61□□□□□ -1.67
TCF4-260ENST00000627685 CXCL5P42830 114 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 PMVKQ15126 192 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 FAM19A5Q7Z5A7 132 aaPredicted RBP4.61□□□□□ -1.67
TCF4-260ENST00000627685 SLC7A5P1Q8MH63 180 aa4.61□□□□□ -1.67
TCF4-260ENST00000627685 F8VRH5 84 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 IGLV7-43P04211 117 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 SPINK8P0C7L1 97 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 LINC00614P0C842 121 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 CKS1BP61024 79 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 GAGE2EQ4V326 116 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 C6orf226Q5I0X4 101 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 C1orf137Q5JT78 98 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 DIRC1Q969H9 104 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 GEMIN7Q9H840 131 aaKnown RBP4.6□□□□□ -1.67
TCF4-260ENST00000627685 GAGE2DQ9UEU5 116 aa4.6□□□□□ -1.67
TCF4-260ENST00000627685 TRAPPC1Q9Y5R8 145 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms