RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 DEFB130AP0DP74 79 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 CLEC2BQ92478 149 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 CHCHD5Q9BSY4 110 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 VWFP04275 2813 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 LYRM9A8MSI8 78 aa5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 CMC4P56277 68 aaPredicted RBP5.11□□□□□ -1.59
CTNNA1-244ENST00000627109 MT-ATP8P03928 68 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 CSNK1G2-AS1Q8NCQ2 148 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 TRAV4A0A0B4J268 109 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 NDUFA1O15239 70 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 SNCGO76070 127 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 MIAQ16674 131 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 ADAMTSL4-AS1Q5T5F5 129 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 OVOL2Q9BRP0 275 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 NDUFC2-KCTD14E9PQ53 114 aa5.1□□□□□ -1.59
CTNNA1-244ENST00000627109 PRB2P02812 416 aaPredicted RBP5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 KRTAP10-3P60369 221 aa5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 ICOSQ9Y6W8 199 aa5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 H7C423 109 aa5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 DAZ4Q86SG3 579 aaKnown RBP5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 CARD19Q96LW7 228 aa5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 DAZ3Q9NR90 486 aaKnown RBP5.09□□□□□ -1.59
CTNNA1-244ENST00000627109 A0A096LPF7 62 aa5.09□□□□□ -1.6
CTNNA1-244ENST00000627109 TRAV8-4A0A0B4J246 113 aa5.09□□□□□ -1.6
CTNNA1-244ENST00000627109 TEX49A0A1B0GTD5 131 aa5.09□□□□□ -1.6
CTNNA1-244ENST00000627109 IGLV1-51P01701 117 aa5.09□□□□□ -1.6
CTNNA1-244ENST00000627109 K7EQD1 137 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 IFITM1P13164 125 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 HERVK_113P63121 156 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 DEFB121Q5J5C9 76 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 LINC00158P58513 81 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 COX6A2Q02221 97 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 TMEM243Q9BU79 118 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 PKD1L1Q8TDX9 2849 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 LOC100131303A0A0U1RQF7 123 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 LINC00612Q8N6U2 182 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 UBE2WQ96B02 151 aa5.08□□□□□ -1.6
CTNNA1-244ENST00000627109 SMIM26A0A096LP01 95 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 LINC00242Q5T6M2 205 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 PFN2P35080 140 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 CLPSL2Q6UWE3 100 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 NBEAL2Q6ZNJ1 2754 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 GAGE2BQ13066 116 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 GAGE2EQ4V326 116 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 S100A7L2Q5SY68 101 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 GAGE2DQ9UEU5 116 aa5.07□□□□□ -1.6
CTNNA1-244ENST00000627109 C16orf74Q96GX8 76 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 KRTAP3-3Q9BYR6 98 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 KRTAP3-2Q9BYR7 98 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 CDC42SE2Q9NRR3 84 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 TRBV6-4A0A1B0GX49 114 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 REG3GQ6UW15 175 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 C5orf38Q86SI9 138 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 SMIM1B2RUZ4 78 aa5.06□□□□□ -1.6
CTNNA1-244ENST00000627109 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
CTNNA1-244ENST00000627109 TRRAPQ9Y4A5 3859 aa5.05□□□□□ -1.6
CTNNA1-244ENST00000627109 TRBV10-2A0A0K0K1G8 114 aa5.05□□□□□ -1.6
CTNNA1-244ENST00000627109 HTN3P15516 51 aa5.05□□□□□ -1.6
CTNNA1-244ENST00000627109 COPS9Q8WXC6 57 aa5.05□□□□□ -1.6
CTNNA1-244ENST00000627109 PAX4O43316 350 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 DEFB4AO15263 64 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 DNAL4O96015 105 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 CRPP02741 224 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 C15orf53Q8NAA6 179 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 LINC00308Q8TCZ7 52 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 XCL1P47992 114 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 SPATA3Q8NHX4 192 aa5.04□□□□□ -1.6
CTNNA1-244ENST00000627109 LST1O00453 97 aa5.03□□□□□ -1.6
CTNNA1-244ENST00000627109 MIR7-3HGQ8N6C7 128 aa5.03□□□□□ -1.6
CTNNA1-244ENST00000627109 ZNF706Q9Y5V0 76 aaPredicted RBP5.03□□□□□ -1.6
CTNNA1-244ENST00000627109 FAM236AA0A1B0GUQ0 79 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 FAM236BA0A1B0GV22 79 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 H3BT86 120 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 FHL2Q14192 279 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 Q6ZVQ6 151 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 C9orf153Q5TBE3 101 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 Q9HAA7 133 aa5.02□□□□□ -1.61
CTNNA1-244ENST00000627109 SOSTDC1Q6X4U4 206 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 COX7B2Q8TF08 81 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 SND1-IT1Q9HBX3 110 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 IGLV10-54A0A075B6I4 117 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 OXTP01178 125 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 BAALC-AS2P0C853 105 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 C9orf66Q5T8R8 295 aa5.01□□□□□ -1.61
CTNNA1-244ENST00000627109 LINC00482Q8N8I6 264 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 IGLV4-60A0A075B6I1 120 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 CCDC179H3BU77 68 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 FAM222AQ5U5X8 452 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 GAGE2AQ6NT46 116 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 FAM19A1Q7Z5A9 133 aa5□□□□□ -1.61
CTNNA1-244ENST00000627109 IGHV3OR16-9A0A0B4J2B5 98 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 A0A087WZ39 114 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 TRBV6-8A0A0A6YYG3 113 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 COX7A2LO14548 114 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 ATP5G1P05496 136 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 SS18Q15532 418 aa4.99□□□□□ -1.61
CTNNA1-244ENST00000627109 DEFB135Q30KP9 77 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms