RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 CHCHD1Q96BP2 118 aaKnown RBP10.52□□□□□ -0.73
UBE3D-208ENST00000626828 IGLV5-45A0A087WSX0 123 aa10.51□□□□□ -0.73
UBE3D-208ENST00000626828 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
UBE3D-208ENST00000626828 DMBT1Q9UGM3 2413 aaPredicted RBP10.5□□□□□ -0.73
UBE3D-208ENST00000626828 TRGC2P03986 189 aa10.5□□□□□ -0.73
UBE3D-208ENST00000626828 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
UBE3D-208ENST00000626828 C9orf116Q5BN46 136 aaPredicted RBP10.49□□□□□ -0.73
UBE3D-208ENST00000626828 Q6ZRP5 223 aa10.49□□□□□ -0.73
UBE3D-208ENST00000626828 H3BRM9 83 aa10.48□□□□□ -0.73
UBE3D-208ENST00000626828 BAGE3Q86Y29 109 aa10.48□□□□□ -0.73
UBE3D-208ENST00000626828 COLCA2A8K830 154 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 SMIM1B2RUZ4 78 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 NDUFC2-KCTD14E9PQ53 114 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 IGLC3P0DOY3 106 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 CXCL5P42830 114 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 GAGE2EQ4V326 116 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 GAGE2DQ9UEU5 116 aa10.47□□□□□ -0.73
UBE3D-208ENST00000626828 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.73
UBE3D-208ENST00000626828 F8VRH5 84 aa10.46□□□□□ -0.73
UBE3D-208ENST00000626828 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
UBE3D-208ENST00000626828 HSBP1O75506 76 aa10.45□□□□□ -0.74
UBE3D-208ENST00000626828 J3QL48 77 aa10.44□□□□□ -0.74
UBE3D-208ENST00000626828 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
UBE3D-208ENST00000626828 HNRNPA3P51991 378 aaKnown RBP10.44□□□□□ -0.74
UBE3D-208ENST00000626828 MYCBP2O75592 4640 aa10.44□□□□□ -0.74
UBE3D-208ENST00000626828 OXTP01178 125 aa10.43□□□□□ -0.74
UBE3D-208ENST00000626828 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
UBE3D-208ENST00000626828 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
UBE3D-208ENST00000626828 PRR3P79522 188 aaKnown RBP10.42□□□□□ -0.74
UBE3D-208ENST00000626828 CHTOPQ9Y3Y2 248 aaKnown RBP10.42□□□□□ -0.74
UBE3D-208ENST00000626828 TRAV12-1A0A0B4J245 112 aa10.41□□□□□ -0.74
UBE3D-208ENST00000626828 FAM19A2Q8N3H0 131 aa10.41□□□□□ -0.74
UBE3D-208ENST00000626828 IGLV5-39A0A0G2JS06 123 aa10.4□□□□□ -0.74
UBE3D-208ENST00000626828 FAM168BA1KXE4 195 aa10.4□□□□□ -0.74
UBE3D-208ENST00000626828 PHF5AQ7RTV0 110 aaKnown RBP10.4□□□□□ -0.74
UBE3D-208ENST00000626828 C11orf86A6NJI1 115 aa10.39□□□□□ -0.75
UBE3D-208ENST00000626828 C9orf129Q5T035 196 aaKnown RBP10.39□□□□□ -0.75
UBE3D-208ENST00000626828 TMEM170BQ5T4T1 132 aa10.39□□□□□ -0.75
UBE3D-208ENST00000626828 SERF1AO75920 110 aa10.38□□□□□ -0.75
UBE3D-208ENST00000626828 FAM19A5Q7Z5A7 132 aaPredicted RBP10.38□□□□□ -0.75
UBE3D-208ENST00000626828 LEPROTL1O95214 131 aa10.37□□□□□ -0.75
UBE3D-208ENST00000626828 SCO1O75880 301 aa10.36□□□□□ -0.75
UBE3D-208ENST00000626828 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
UBE3D-208ENST00000626828 PKHD1L1Q86WI1 4243 aa10.35□□□□□ -0.75
UBE3D-208ENST00000626828 LINC00310P59036 64 aa10.35□□□□□ -0.75
UBE3D-208ENST00000626828 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
UBE3D-208ENST00000626828 SPINK6Q6UWN8 80 aa10.35□□□□□ -0.75
UBE3D-208ENST00000626828 KRTAP7-1Q8IUC3 87 aa10.35□□□□□ -0.75
UBE3D-208ENST00000626828 XAGE1AQ9HD64 81 aa10.35□□□□□ -0.75
UBE3D-208ENST00000626828 NUPR1O60356 82 aa10.34□□□□□ -0.75
UBE3D-208ENST00000626828 M0QXV9 152 aa10.33□□□□□ -0.76
UBE3D-208ENST00000626828 ODF1Q14990 250 aa10.33□□□□□ -0.76
UBE3D-208ENST00000626828 SFTA2Q6UW10 78 aa10.33□□□□□ -0.76
UBE3D-208ENST00000626828 HSPB8Q9UJY1 196 aa10.33□□□□□ -0.76
UBE3D-208ENST00000626828 LRP1Q07954 4544 aaKnown RBP10.33□□□□□ -0.76
UBE3D-208ENST00000626828 TMEM223A0PJW6 202 aa10.32□□□□□ -0.76
UBE3D-208ENST00000626828 UBE2BP63146 152 aa10.32□□□□□ -0.76
UBE3D-208ENST00000626828 LBHQ53QV2 105 aaPredicted RBP10.32□□□□□ -0.76
UBE3D-208ENST00000626828 C1orf137Q5JT78 98 aa10.32□□□□□ -0.76
UBE3D-208ENST00000626828 FABP4P15090 132 aa10.31□□□□□ -0.76
UBE3D-208ENST00000626828 C22orf24Q9Y442 160 aa10.31□□□□□ -0.76
UBE3D-208ENST00000626828 H0Y8G0 127 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 PFN2P35080 140 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 COX17Q14061 63 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 SERTAD4-AS1Q5TG53 156 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 PLA2G2DQ9UNK4 145 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 HERC1Q15751 4861 aa10.3□□□□□ -0.76
UBE3D-208ENST00000626828 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BKO60814 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BJP06899 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BOP23527 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BBP33778 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BDP58876 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BCP62807 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST2H2BEQ16778 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.29□□□□□ -0.76
UBE3D-208ENST00000626828 KRTAP11-1Q8IUC1 163 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BHQ93079 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BNQ99877 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 HIST1H2BMQ99879 126 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 ERG28Q9UKR5 140 aa10.29□□□□□ -0.76
UBE3D-208ENST00000626828 REG3GQ6UW15 175 aa10.28□□□□□ -0.76
UBE3D-208ENST00000626828 ZNF625Q96I27 306 aaPredicted RBP10.28□□□□□ -0.76
UBE3D-208ENST00000626828 IGLV7-43P04211 117 aa10.27□□□□□ -0.77
UBE3D-208ENST00000626828 MAP1LC3CQ9BXW4 147 aa10.26□□□□□ -0.77
UBE3D-208ENST00000626828 PLNP26678 52 aa10.25□□□□□ -0.77
UBE3D-208ENST00000626828 MRPL55Q7Z7F7 128 aaKnown RBP10.25□□□□□ -0.77
UBE3D-208ENST00000626828 LINC01600Q96MT4 127 aa10.25□□□□□ -0.77
UBE3D-208ENST00000626828 DPM2O94777 84 aa10.24□□□□□ -0.77
UBE3D-208ENST00000626828 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
UBE3D-208ENST00000626828 IGLV5-37A0A075B6J1 123 aa10.23□□□□□ -0.77
UBE3D-208ENST00000626828 LINC00158P58513 81 aa10.23□□□□□ -0.77
UBE3D-208ENST00000626828 DIRC1Q969H9 104 aa10.23□□□□□ -0.77
UBE3D-208ENST00000626828 LINC00167Q96N53 147 aa10.23□□□□□ -0.77
UBE3D-208ENST00000626828 LINC00587B1AMM8 73 aa10.22□□□□□ -0.77
UBE3D-208ENST00000626828 IGKCP01834 107 aa10.22□□□□□ -0.77
UBE3D-208ENST00000626828 MT1HL1P0DM35 61 aa10.22□□□□□ -0.77
UBE3D-208ENST00000626828 S100A1P23297 94 aa10.22□□□□□ -0.77
UBE3D-208ENST00000626828 HERV-K104P63124 156 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms