RNA–Protein interactions for RNA: ENST00000621242.1

SNHG28-203, Transcript of small nucleolar RNA host gene 28, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNHG28, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28-203ENST00000621242 A0A1W2PNN7 141 aa9.48□□□□□ -0.89
SNHG28-203ENST00000621242 NDUFA6P56556 154 aa9.48□□□□□ -0.89
SNHG28-203ENST00000621242 SYCNQ0VAF6 134 aa9.48□□□□□ -0.89
SNHG28-203ENST00000621242 GAGE2BQ13066 116 aa9.48□□□□□ -0.89
SNHG28-203ENST00000621242 Q6ZN92 141 aa9.48□□□□□ -0.89
SNHG28-203ENST00000621242 NPSP0C0P6 89 aa9.47□□□□□ -0.89
SNHG28-203ENST00000621242 SS18Q15532 418 aa9.47□□□□□ -0.89
SNHG28-203ENST00000621242 VCX2Q9H322 139 aa9.47□□□□□ -0.89
SNHG28-203ENST00000621242 A0A0U1RQV1 116 aa9.46□□□□□ -0.9
SNHG28-203ENST00000621242 LINC01549A6NIU2 74 aa9.46□□□□□ -0.9
SNHG28-203ENST00000621242 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.46□□□□□ -0.9
SNHG28-203ENST00000621242 ZNF561-AS1K7EIQ3 104 aa9.46□□□□□ -0.9
SNHG28-203ENST00000621242 UBE2D1P51668 147 aa9.46□□□□□ -0.9
SNHG28-203ENST00000621242 C1orf137Q5JT78 98 aa9.46□□□□□ -0.9
SNHG28-203ENST00000621242 LOC107984640A0A0U1RRK4 108 aa9.45□□□□□ -0.9
SNHG28-203ENST00000621242 KRTAP9-6A0A140TA67 174 aa9.45□□□□□ -0.9
SNHG28-203ENST00000621242 COA6Q5JTJ3 125 aaKnown RBP9.45□□□□□ -0.9
SNHG28-203ENST00000621242 C2orf88Q9BSF0 95 aa9.45□□□□□ -0.9
SNHG28-203ENST00000621242 ATP5LO75964 103 aa9.44□□□□□ -0.9
SNHG28-203ENST00000621242 FABP4P15090 132 aa9.44□□□□□ -0.9
SNHG28-203ENST00000621242 LINC00242Q5T6M2 205 aa9.44□□□□□ -0.9
SNHG28-203ENST00000621242 CD164L2Q6UWJ8 174 aa9.44□□□□□ -0.9
SNHG28-203ENST00000621242 IFI27L1Q96BM0 104 aa9.44□□□□□ -0.9
SNHG28-203ENST00000621242 PMVKQ15126 192 aa9.43□□□□□ -0.9
SNHG28-203ENST00000621242 PRR4Q16378 134 aa9.43□□□□□ -0.9
SNHG28-203ENST00000621242 C9orf116Q5BN46 136 aaPredicted RBP9.43□□□□□ -0.9
SNHG28-203ENST00000621242 PAPPA-AS1Q5QFB9 102 aa9.43□□□□□ -0.9
SNHG28-203ENST00000621242 PHF5AQ7RTV0 110 aaKnown RBP9.43□□□□□ -0.9
SNHG28-203ENST00000621242 C5orf38Q86SI9 138 aa9.43□□□□□ -0.9
SNHG28-203ENST00000621242 CST9LQ9H4G1 147 aa9.43□□□□□ -0.9
SNHG28-203ENST00000621242 LEPROTL1O95214 131 aa9.42□□□□□ -0.9
SNHG28-203ENST00000621242 KRTAP3-3Q9BYR6 98 aa9.42□□□□□ -0.9
SNHG28-203ENST00000621242 KRTAP3-2Q9BYR7 98 aa9.42□□□□□ -0.9
SNHG28-203ENST00000621242 IGLV4-69A0A075B6H9 119 aa9.41□□□□□ -0.9
SNHG28-203ENST00000621242 IGHV3OR16-9A0A0B4J2B5 98 aa9.41□□□□□ -0.9
SNHG28-203ENST00000621242 DIRC1Q969H9 104 aa9.41□□□□□ -0.9
SNHG28-203ENST00000621242 H0Y8G0 127 aa9.4□□□□□ -0.9
SNHG28-203ENST00000621242 IGLV7-43P04211 117 aa9.4□□□□□ -0.9
SNHG28-203ENST00000621242 LCE2AQ5TA79 106 aaPredicted RBP9.4□□□□□ -0.9
SNHG28-203ENST00000621242 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
SNHG28-203ENST00000621242 COX7A2LO14548 114 aa9.39□□□□□ -0.91
SNHG28-203ENST00000621242 H0Y9J4 135 aa9.38□□□□□ -0.91
SNHG28-203ENST00000621242 RPL18AQ02543 176 aaKnown RBP9.38□□□□□ -0.91
SNHG28-203ENST00000621242 CAMK2N2Q96S95 79 aa9.38□□□□□ -0.91
SNHG28-203ENST00000621242 HSPB8Q9UJY1 196 aa9.38□□□□□ -0.91
SNHG28-203ENST00000621242 IGLV1-50A0A075B6I6 118 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 TINCRA0A1B0GVN0 87 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 APOMO95445 188 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 IGLC3P0DOY3 106 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 MALP21145 153 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 GEMIN7Q9H840 131 aaKnown RBP9.37□□□□□ -0.91
SNHG28-203ENST00000621242 CDKN2A-AS1Q9UH64 79 aa9.37□□□□□ -0.91
SNHG28-203ENST00000621242 A0A087WZ39 114 aa9.36□□□□□ -0.91
SNHG28-203ENST00000621242 TRAV12-1A0A0B4J245 112 aa9.36□□□□□ -0.91
SNHG28-203ENST00000621242 C11orf86A6NJI1 115 aa9.36□□□□□ -0.91
SNHG28-203ENST00000621242 HERVK_113P63121 156 aa9.36□□□□□ -0.91
SNHG28-203ENST00000621242 LINC00469Q8N7U9 141 aa9.36□□□□□ -0.91
SNHG28-203ENST00000621242 MRPL35Q9NZE8 188 aaKnown RBP9.36□□□□□ -0.91
SNHG28-203ENST00000621242 CHTOPQ9Y3Y2 248 aaKnown RBP9.36□□□□□ -0.91
SNHG28-203ENST00000621242 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 S100A6P06703 90 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 KRTAP1-4P0C5Y4 121 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 SEC11AP67812 179 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 KRTAP11-1Q8IUC1 163 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 PMCHL2Q9BQD1 86 aa9.35□□□□□ -0.91
SNHG28-203ENST00000621242 F8VRH5 84 aa9.34□□□□□ -0.91
SNHG28-203ENST00000621242 ZNF22P17026 224 aaPredicted RBP9.34□□□□□ -0.91
SNHG28-203ENST00000621242 SNRPEP62304 92 aaKnown RBP9.34□□□□□ -0.91
SNHG28-203ENST00000621242 ORAOV1Q8WV07 137 aa9.34□□□□□ -0.91
SNHG28-203ENST00000621242 PACRGQ96M98 296 aaPredicted RBP9.34□□□□□ -0.91
SNHG28-203ENST00000621242 SPINK8P0C7L1 97 aa9.33□□□□□ -0.92
SNHG28-203ENST00000621242 SPAG11BQ08648 103 aa9.33□□□□□ -0.92
SNHG28-203ENST00000621242 C2orf48Q96LS8 159 aa9.33□□□□□ -0.92
SNHG28-203ENST00000621242 MAP1LC3CQ9BXW4 147 aa9.33□□□□□ -0.92
SNHG28-203ENST00000621242 TMA7Q9Y2S6 64 aaKnown RBP9.33□□□□□ -0.92
SNHG28-203ENST00000621242 C5orf52A6NGY3 159 aa9.32□□□□□ -0.92
SNHG28-203ENST00000621242 SMIM1B2RUZ4 78 aa9.32□□□□□ -0.92
SNHG28-203ENST00000621242 C3orf79P0CE67 100 aa9.32□□□□□ -0.92
SNHG28-203ENST00000621242 HIST1H2BLQ99880 126 aa9.32□□□□□ -0.92
SNHG28-203ENST00000621242 FAM168BA1KXE4 195 aa9.31□□□□□ -0.92
SNHG28-203ENST00000621242 SYS1-DBNDD2H3BUS1 97 aa9.31□□□□□ -0.92
SNHG28-203ENST00000621242 S100A2P29034 98 aa9.31□□□□□ -0.92
SNHG28-203ENST00000621242 KRTDAPP60985 99 aa9.3□□□□□ -0.92
SNHG28-203ENST00000621242 TMEM170BQ5T4T1 132 aa9.3□□□□□ -0.92
SNHG28-203ENST00000621242 LINC01561Q8N1V8 128 aa9.3□□□□□ -0.92
SNHG28-203ENST00000621242 RPL13AP40429 203 aaKnown RBP9.29□□□□□ -0.92
SNHG28-203ENST00000621242 KIAA0087Q14695 138 aa9.29□□□□□ -0.92
SNHG28-203ENST00000621242 RNF151Q2KHN1 245 aa9.29□□□□□ -0.92
SNHG28-203ENST00000621242 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
SNHG28-203ENST00000621242 TOMM7Q9P0U1 55 aa9.29□□□□□ -0.92
SNHG28-203ENST00000621242 LINC01545Q5VT33 79 aa9.28□□□□□ -0.92
SNHG28-203ENST00000621242 H3BRM9 83 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 DPM2O94777 84 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 TSPAN13O95857 204 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 PET117Q6UWS5 81 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 C2orf82Q6UX34 121 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
SNHG28-203ENST00000621242 MUC17Q685J3 4493 aa9.27□□□□□ -0.93
SNHG28-203ENST00000621242 TMEM223A0PJW6 202 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 95.5 ms