RNA–Protein interactions for RNA: ENST00000620828.4

FMR1-217, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best)

Gene FMR1, Length 4,830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-217ENST00000620828 GAGE2BQ13066 116 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 GAGE2EQ4V326 116 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 GAGE2DQ9UEU5 116 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 F8W1H4 67 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 POLR2KP53803 58 aaKnown RBP3.7□□□□□ -1.82
FMR1-217ENST00000620828 RPL32P62910 135 aaKnown RBP3.7□□□□□ -1.82
FMR1-217ENST00000620828 GAGE2AQ6NT46 116 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 TSKUQ8WUA8 353 aa3.7□□□□□ -1.82
FMR1-217ENST00000620828 DMBT1Q9UGM3 2413 aaPredicted RBP3.7□□□□□ -1.82
FMR1-217ENST00000620828 EVI2AP22794 236 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 GAGE13Q4V321 117 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 C20orf203Q8NBC4 194 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 TMSB15BA0A087X1C1 80 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 M0R381 172 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 IGLV7-46A0A075B6I9 117 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 PKIAP61925 76 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 C2orf91Q6ZV80 131 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 TMEM191AQ9H0A3 160 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 DPH3P1Q9H4G8 78 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 FAM30AQ9NZY2 134 aa3.69□□□□□ -1.82
FMR1-217ENST00000620828 J3QQQ9 107 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 RPS10P46783 165 aaKnown RBP3.68□□□□□ -1.82
FMR1-217ENST00000620828 PRELID3AQ96N28 172 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 TRBV27A0A0K0K1C4 114 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 H7C423 109 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 J3KT08 172 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 TSHBP01222 138 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 RPS10P5Q9NQ39 176 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 NCR2O95944 276 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 TMEM97Q5BJF2 176 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 MEIG1Q5JSS6 88 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 PRO0628Q9UI54 55 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 SLPIP03973 132 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 HRCT1Q6UXD1 115 aa3.68□□□□□ -1.82
FMR1-217ENST00000620828 NUP35Q8NFH5 326 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 CHCHD1Q96BP2 118 aaKnown RBP3.67□□□□□ -1.82
FMR1-217ENST00000620828 GCSHP23434 173 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 FUSP35637 526 aaKnown RBP eCLIP3.67□□□□□ -1.82
FMR1-217ENST00000620828 CNBPP62633 177 aaKnown RBP3.67□□□□□ -1.82
FMR1-217ENST00000620828 MUC21A0A0G2JKD1 596 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 MUC21A0A140T8X8 626 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 C16orf90A8MZG2 172 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 IGLV4-60A0A075B6I1 120 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 COX7A2LO14548 114 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 SEC11AP67812 179 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 RPL36AP83881 106 aaKnown RBP3.67□□□□□ -1.82
FMR1-217ENST00000620828 RPL36ALQ969Q0 106 aaKnown RBP3.67□□□□□ -1.82
FMR1-217ENST00000620828 PMCHL2Q9BQD1 86 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 TP73-AS1Q9UF72 201 aa3.67□□□□□ -1.82
FMR1-217ENST00000620828 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
FMR1-217ENST00000620828 SMIM1B2RUZ4 78 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 C18orf32Q8TCD1 76 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 RPL39LQ96EH5 51 aaKnown RBP3.66□□□□□ -1.82
FMR1-217ENST00000620828 SMKR1H3BMG3 65 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 H3BMG7 143 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 MP68P56378 58 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 C6orf99Q4VX62 202 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 IGHV3-30P01768 117 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 IGHV3-33P01772 117 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 IGHV3-30-3P0DP02 117 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 IGHV3-30-5P0DP03 117 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 SOSTDC1Q6X4U4 206 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 C15orf56Q8N910 161 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 LINC01600Q96MT4 127 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 LAMTOR2Q9Y2Q5 125 aa3.66□□□□□ -1.82
FMR1-217ENST00000620828 TRAV26-2A0A0B4J265 109 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 IGLC3P0DOY3 106 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 SPANXN1Q5VSR9 72 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 FAM19A3Q7Z5A8 133 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 OR10D4PQ8NGN7 298 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 HIGD1CA8MV81 97 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 FAM74A4Q5TZK3 123 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 CHAC1Q9BUX1 264 aa3.65□□□□□ -1.82
FMR1-217ENST00000620828 SCGB3A1Q96QR1 104 aa3.65□□□□□ -1.83
FMR1-217ENST00000620828 IGKV2D-30A0A075B6S6 120 aa3.65□□□□□ -1.83
FMR1-217ENST00000620828 IGHV1-24A0A0C4DH33 117 aa3.65□□□□□ -1.83
FMR1-217ENST00000620828 FOXI1Q12951 378 aa3.65□□□□□ -1.83
FMR1-217ENST00000620828 PMCHL1Q16048 86 aa3.65□□□□□ -1.83
FMR1-217ENST00000620828 MIAQ16674 131 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 ZNF56Q15929 161 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 OCIAD2Q56VL3 154 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 FAM104BQ5XKR9 115 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 DPM2O94777 84 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 SEC61BP60468 96 aaKnown RBP3.64□□□□□ -1.83
FMR1-217ENST00000620828 SDIM1Q6ZPB5 146 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 TIMM21Q9BVV7 248 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 A0A1B0GUT8 65 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 PANO1I0J062 215 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 TAX1BP3O14907 124 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 CRPP02741 224 aa3.64□□□□□ -1.83
FMR1-217ENST00000620828 SERF1AO75920 110 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 TRACP01848 142 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 MRPL51Q4U2R6 128 aaKnown RBP3.63□□□□□ -1.83
FMR1-217ENST00000620828 NAT8BQ9UHF3 227 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.63□□□□□ -1.83
FMR1-217ENST00000620828 HLA-DQA1P01909 254 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 SPINK8P0C7L1 97 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 TRBV20-1A0A075B6N2 111 aa3.63□□□□□ -1.83
FMR1-217ENST00000620828 GVQW2A0A096LPI5 108 aaPredicted RBP3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms