RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	RPL28	P46779	137 aa	Known RBP	10.19	□□□□□ -0.78
SMTN-223	ENST00000619644	ZNF843	Q8N446	348 aa		10.19	□□□□□ -0.78
SMTN-223	ENST00000619644		A0A087WYN8	130 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	TRAV13-2	A0A0B4J235	113 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	XCL1	P47992	114 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	LINC00337	Q8N6G1	96 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	GIG44	P09565	113 aa	Predicted RBP	10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	IL17D	Q8TAD2	202 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	ITPR2	Q14571	2701 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644	C6orf226	Q5I0X4	101 aa		10.18	□□□□□ -0.78
SMTN-223	ENST00000619644		A0A087WVE0	104 aa		10.17	□□□□□ -0.78
SMTN-223	ENST00000619644	FAM19A3	Q7Z5A8	133 aa		10.17	□□□□□ -0.78
SMTN-223	ENST00000619644	LINC01006	Q8NI28	216 aa		10.17	□□□□□ -0.78
SMTN-223	ENST00000619644	RPS28	P62857	69 aa	Known RBP	10.17	□□□□□ -0.78
SMTN-223	ENST00000619644	LINC00846	Q9NV44	126 aa		10.17	□□□□□ -0.78
SMTN-223	ENST00000619644	PF4	P02776	101 aa		10.16	□□□□□ -0.78
SMTN-223	ENST00000619644	KIR2DL5B	Q8NHK3	375 aa		10.16	□□□□□ -0.78
SMTN-223	ENST00000619644	IGKV2-28	A0A075B6P5	120 aa		10.16	□□□□□ -0.78
SMTN-223	ENST00000619644	IGKV2D-28	P01615	120 aa		10.16	□□□□□ -0.78
SMTN-223	ENST00000619644	TRBV6-8	A0A0A6YYG3	113 aa		10.15	□□□□□ -0.78
SMTN-223	ENST00000619644		Q6JHZ5	121 aa		10.15	□□□□□ -0.78
SMTN-223	ENST00000619644	SMIM11B	Q8TCY0	68 aa		10.15	□□□□□ -0.78
SMTN-223	ENST00000619644	PLAC8L1	A1L4L8	177 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	OVOL2	Q9BRP0	275 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	TRBV6-4	A0A1B0GX49	114 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	SERP2	Q8N6R1	65 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	SLPI	P03973	132 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	CCL18	P55774	89 aa		10.14	□□□□□ -0.79
SMTN-223	ENST00000619644	GYPE	P15421	78 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	TMEM258	P61165	79 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	KRTAP1-3	Q8IUG1	177 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	DEFB4A	O15263	64 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	TMEM86B	Q8N661	226 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	UPK3B	Q9BT76	320 aa		10.13	□□□□□ -0.79
SMTN-223	ENST00000619644	LECT2	O14960	151 aa		10.12	□□□□□ -0.79
SMTN-223	ENST00000619644	FHL2	Q14192	279 aa		10.12	□□□□□ -0.79
SMTN-223	ENST00000619644	LINC01561	Q8N1V8	128 aa		10.12	□□□□□ -0.79
SMTN-223	ENST00000619644	DPH3	Q96FX2	82 aa		10.12	□□□□□ -0.79
SMTN-223	ENST00000619644	NCR3	O14931	201 aa		10.12	□□□□□ -0.79
SMTN-223	ENST00000619644	IGLV10-54	A0A075B6I4	117 aa		10.11	□□□□□ -0.79
SMTN-223	ENST00000619644	USP17L23	D6RBM5	183 aa		10.11	□□□□□ -0.79
SMTN-223	ENST00000619644	RNASE1	P07998	156 aa	Known RBP	10.11	□□□□□ -0.79
SMTN-223	ENST00000619644	OBSCN-AS1	Q96MR7	158 aa		10.11	□□□□□ -0.79
SMTN-223	ENST00000619644	DSCR8	Q96T75	97 aa		10.11	□□□□□ -0.79
SMTN-223	ENST00000619644	IGHV3OR16-9	A0A0B4J2B5	98 aa		10.1	□□□□□ -0.79
SMTN-223	ENST00000619644	OXT	P01178	125 aa		10.1	□□□□□ -0.79
SMTN-223	ENST00000619644	IGLV1-51	P01701	117 aa		10.1	□□□□□ -0.79
SMTN-223	ENST00000619644	FASN	P49327	2511 aa	Known RBP	10.1	□□□□□ -0.79
SMTN-223	ENST00000619644	PRR3	P79522	188 aa	Known RBP	10.09	□□□□□ -0.79
SMTN-223	ENST00000619644	LINC00959	A0A1B0GUT2	108 aa		10.09	□□□□□ -0.79
SMTN-223	ENST00000619644		H0YGX0	51 aa		10.09	□□□□□ -0.79
SMTN-223	ENST00000619644	CMC4	P56277	68 aa	Predicted RBP	10.09	□□□□□ -0.79
SMTN-223	ENST00000619644	TENM4	Q6N022	2769 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644	SS18	Q15532	418 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644	CSNK1G2-AS1	Q8NCQ2	148 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644	C19orf73	Q9NVV2	129 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644		A0A087WZ39	114 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644	VWF	P04275	2813 aa		10.07	□□□□□ -0.8
SMTN-223	ENST00000619644	LINC00482	Q8N8I6	264 aa		10.06	□□□□□ -0.8
SMTN-223	ENST00000619644	IBA57-AS1	B1ANH7	110 aa		10.06	□□□□□ -0.8
SMTN-223	ENST00000619644	HTN3	P15516	51 aa		10.05	□□□□□ -0.8
SMTN-223	ENST00000619644	SMR3A	Q99954	134 aa		10.05	□□□□□ -0.8
SMTN-223	ENST00000619644	HILS1	P60008	231 aa		10.05	□□□□□ -0.8
SMTN-223	ENST00000619644		Q8N3U1	123 aa		10.05	□□□□□ -0.8
SMTN-223	ENST00000619644	HELZ2	Q9BYK8	2649 aa	Known RBP	10.04	□□□□□ -0.8
SMTN-223	ENST00000619644	LINC00269	Q8N2A0	174 aa		10.04	□□□□□ -0.8
SMTN-223	ENST00000619644	ANG	P03950	147 aa	Known RBP	10.03	□□□□□ -0.8
SMTN-223	ENST00000619644	C4orf26	Q17RF5	130 aa		10.03	□□□□□ -0.8
SMTN-223	ENST00000619644	C9orf116	Q5BN46	136 aa	Predicted RBP	10.03	□□□□□ -0.8
SMTN-223	ENST00000619644	WFDC9	Q8NEX5	89 aa		10.03	□□□□□ -0.8
SMTN-223	ENST00000619644	ORMDL1	Q9P0S3	153 aa		10.03	□□□□□ -0.8
SMTN-223	ENST00000619644	HECTD1	Q9ULT8	2610 aa		10.02	□□□□□ -0.8
SMTN-223	ENST00000619644	CCK	P06307	115 aa		10.02	□□□□□ -0.81
SMTN-223	ENST00000619644	DEFB135	Q30KP9	77 aa		10.01	□□□□□ -0.81
SMTN-223	ENST00000619644	WIPF1	O43516	503 aa		10.01	□□□□□ -0.81
SMTN-223	ENST00000619644	GHRH	P01286	108 aa		10.01	□□□□□ -0.81
SMTN-223	ENST00000619644	TRAV23DV6	A0A075B6W5	121 aa		10	□□□□□ -0.81
SMTN-223	ENST00000619644		Q5XG85	94 aa		10	□□□□□ -0.81
SMTN-223	ENST00000619644	HRCT1	Q6UXD1	115 aa		9.99	□□□□□ -0.81
SMTN-223	ENST00000619644	PRO0255	Q9UI72	69 aa		9.99	□□□□□ -0.81
SMTN-223	ENST00000619644	ATR	Q13535	2644 aa		9.98	□□□□□ -0.81
SMTN-223	ENST00000619644	FAM19A1	Q7Z5A9	133 aa		9.98	□□□□□ -0.81
SMTN-223	ENST00000619644	UNC79	Q9P2D8	2635 aa		9.97	□□□□□ -0.81
SMTN-223	ENST00000619644	S100A7L2	Q5SY68	101 aa		9.97	□□□□□ -0.81
SMTN-223	ENST00000619644	ENHO	Q6UWT2	76 aa		9.97	□□□□□ -0.81
SMTN-223	ENST00000619644	LY6G6D	O95868	133 aa		9.97	□□□□□ -0.81
SMTN-223	ENST00000619644	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	9.97	□□□□□ -0.81
SMTN-223	ENST00000619644	ATP5EP2	Q5VTU8	51 aa		9.96	□□□□□ -0.82
SMTN-223	ENST00000619644	KRTAP1-1	Q07627	177 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	C16orf95	Q9H693	158 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	PDZD2	O15018	2839 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	SPATA3	Q8NHX4	192 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	JMJD7-PLA2G4B	H0Y9G9	81 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	NDUFC2	O95298	119 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644		Q8IZM0	81 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	C20orf197	Q8N268	126 aa		9.95	□□□□□ -0.82
SMTN-223	ENST00000619644	DAD1	P61803	113 aa		9.94	□□□□□ -0.82
SMTN-223	ENST00000619644	REG3A	Q06141	175 aa		9.94	□□□□□ -0.82
SMTN-223	ENST00000619644		X6R8D5	127 aa		9.94	□□□□□ -0.82
SMTN-223	ENST00000619644	LINC00167	Q96N53	147 aa		9.94	□□□□□ -0.82

Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms