RNA–Protein interactions for RNA: ENST00000618217.4

CBWD3-213, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene CBWD3, Length 1,611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-213ENST00000618217 IGLV5-39A0A0G2JS06 123 aa14.69□□□□□ -0.06
CBWD3-213ENST00000618217 TMEM223A0PJW6 202 aa14.68□□□□□ -0.06
CBWD3-213ENST00000618217 C14orf144Q96I85 54 aa14.68□□□□□ -0.06
CBWD3-213ENST00000618217 Q8IZM0 81 aa14.67□□□□□ -0.06
CBWD3-213ENST00000618217 C9orf163Q8N9P6 203 aa14.67□□□□□ -0.06
CBWD3-213ENST00000618217 EPPK1P58107 5090 aaKnown RBP14.67□□□□□ -0.06
CBWD3-213ENST00000618217 F8WDY8 70 aa14.66□□□□□ -0.06
CBWD3-213ENST00000618217 DDTP30046 118 aa14.66□□□□□ -0.06
CBWD3-213ENST00000618217 SYCNQ0VAF6 134 aa14.66□□□□□ -0.06
CBWD3-213ENST00000618217 LINC01620Q4KN68 170 aa14.65□□□□□ -0.06
CBWD3-213ENST00000618217 Q6ZRU5 148 aa14.65□□□□□ -0.06
CBWD3-213ENST00000618217 MIEN1Q9BRT3 115 aa14.65□□□□□ -0.06
CBWD3-213ENST00000618217 TOMM7Q9P0U1 55 aa14.65□□□□□ -0.06
CBWD3-213ENST00000618217 UQCR10Q9UDW1 63 aa14.65□□□□□ -0.06
CBWD3-213ENST00000618217 DNAH5Q8TE73 4624 aa14.64□□□□□ -0.07
CBWD3-213ENST00000618217 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.64□□□□□ -0.07
CBWD3-213ENST00000618217 C16orf90A8MZG2 172 aa14.64□□□□□ -0.07
CBWD3-213ENST00000618217 GCSHP23434 173 aa14.64□□□□□ -0.07
CBWD3-213ENST00000618217 COX7B2Q8TF08 81 aa14.64□□□□□ -0.07
CBWD3-213ENST00000618217 CAMK2N2Q96S95 79 aa14.64□□□□□ -0.07
CBWD3-213ENST00000618217 PRSS2P07478 247 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 NMUP48645 174 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 C6orf226Q5I0X4 101 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 C10orf25Q5T742 122 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 C2orf82Q6UX34 121 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 UNQ6190/PRO20217Q6UXQ8 127 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 CARD19Q96LW7 228 aa14.63□□□□□ -0.07
CBWD3-213ENST00000618217 KRTAP10-1P60331 282 aa14.62□□□□□ -0.07
CBWD3-213ENST00000618217 NDUFA1O15239 70 aa14.61□□□□□ -0.07
CBWD3-213ENST00000618217 IGKV2D-26A0A0A0MRZ7 120 aa14.6□□□□□ -0.07
CBWD3-213ENST00000618217 COX8AP10176 69 aa14.6□□□□□ -0.07
CBWD3-213ENST00000618217 HERVK_113P61574 105 aa14.6□□□□□ -0.07
CBWD3-213ENST00000618217 TP73-AS1Q9UF72 201 aa14.6□□□□□ -0.07
CBWD3-213ENST00000618217 LINC00587B1AMM8 73 aa14.59□□□□□ -0.07
CBWD3-213ENST00000618217 SLC25A34Q6PIV7 304 aa14.59□□□□□ -0.07
CBWD3-213ENST00000618217 SDIM1Q6ZPB5 146 aa14.59□□□□□ -0.07
CBWD3-213ENST00000618217 CKS1BP61024 79 aa14.59□□□□□ -0.07
CBWD3-213ENST00000618217 RNF151Q2KHN1 245 aa14.59□□□□□ -0.07
CBWD3-213ENST00000618217 C6orf48Q9UBA6 75 aa14.58□□□□□ -0.08
CBWD3-213ENST00000618217 E9PLD3 99 aa14.57□□□□□ -0.08
CBWD3-213ENST00000618217 CXCL5P42830 114 aa14.57□□□□□ -0.08
CBWD3-213ENST00000618217 HNRNPA3P51991 378 aaKnown RBP14.56□□□□□ -0.08
CBWD3-213ENST00000618217 PCP2Q8IVA1 136 aa14.56□□□□□ -0.08
CBWD3-213ENST00000618217 DYNC1H1Q14204 4646 aaKnown RBP14.55□□□□□ -0.08
CBWD3-213ENST00000618217 TRBV30A0A0K0K1B3 111 aa14.55□□□□□ -0.08
CBWD3-213ENST00000618217 BOD1L2Q8IYS8 172 aa14.54□□□□□ -0.08
CBWD3-213ENST00000618217 TTTY13Q9BZ97 58 aa14.54□□□□□ -0.08
CBWD3-213ENST00000618217 LEPROTO15243 131 aa14.53□□□□□ -0.08
CBWD3-213ENST00000618217 TSPEAR-AS2P59090 65 aa14.53□□□□□ -0.08
CBWD3-213ENST00000618217 ZNF625Q96I27 306 aaPredicted RBP14.53□□□□□ -0.08
CBWD3-213ENST00000618217 Q6ZSA8 131 aa14.52□□□□□ -0.08
CBWD3-213ENST00000618217 LRP1BQ9NZR2 4599 aa14.52□□□□□ -0.09
CBWD3-213ENST00000618217 C9orf116Q5BN46 136 aaPredicted RBP14.52□□□□□ -0.09
CBWD3-213ENST00000618217 FAM30AQ9NZY2 134 aa14.52□□□□□ -0.09
CBWD3-213ENST00000618217 DLEU1O43261 78 aa14.51□□□□□ -0.09
CBWD3-213ENST00000618217 PLEKHB2Q96CS7 222 aa14.51□□□□□ -0.09
CBWD3-213ENST00000618217 LOC107984640A0A0U1RRK4 108 aa14.49□□□□□ -0.09
CBWD3-213ENST00000618217 J3QQQ9 107 aa14.49□□□□□ -0.09
CBWD3-213ENST00000618217 TLX1NBP0CAT3 122 aa14.49□□□□□ -0.09
CBWD3-213ENST00000618217 PANO1I0J062 215 aa14.48□□□□□ -0.09
CBWD3-213ENST00000618217 CTAG1AP78358 180 aa14.48□□□□□ -0.09
CBWD3-213ENST00000618217 SFTA2Q6UW10 78 aa14.48□□□□□ -0.09
CBWD3-213ENST00000618217 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.48□□□□□ -0.09
CBWD3-213ENST00000618217 A0A096LNI7 61 aa14.47□□□□□ -0.09
CBWD3-213ENST00000618217 CIRBPQ14011 172 aaKnown RBP14.47□□□□□ -0.09
CBWD3-213ENST00000618217 C2orf91Q6ZV80 131 aa14.47□□□□□ -0.09
CBWD3-213ENST00000618217 NDUFA12Q9UI09 145 aa14.47□□□□□ -0.09
CBWD3-213ENST00000618217 CHTF8P0CG12 524 aa14.46□□□□□ -0.09
CBWD3-213ENST00000618217 LGALS3P17931 250 aaKnown RBP14.46□□□□□ -0.09
CBWD3-213ENST00000618217 Q6ZRP5 223 aa14.46□□□□□ -0.09
CBWD3-213ENST00000618217 PKIGQ9Y2B9 76 aa14.46□□□□□ -0.09
CBWD3-213ENST00000618217 MYMXA0A1B0GTQ4 84 aa14.44□□□□□ -0.1
CBWD3-213ENST00000618217 ZNF815PA8K554 130 aa14.44□□□□□ -0.1
CBWD3-213ENST00000618217 NDUFC2-KCTD14E9PQ53 114 aa14.44□□□□□ -0.1
CBWD3-213ENST00000618217 PTTG1IPP53801 180 aa14.44□□□□□ -0.1
CBWD3-213ENST00000618217 SPACA4Q8TDM5 124 aa14.43□□□□□ -0.1
CBWD3-213ENST00000618217 IGKV2-24A0A0C4DH68 120 aa14.42□□□□□ -0.1
CBWD3-213ENST00000618217 XGP55808 180 aa14.42□□□□□ -0.1
CBWD3-213ENST00000618217 RPL18AQ02543 176 aaKnown RBP14.42□□□□□ -0.1
CBWD3-213ENST00000618217 DNAH8Q96JB1 4490 aa14.42□□□□□ -0.1
CBWD3-213ENST00000618217 HERV-K104P63124 156 aa14.41□□□□□ -0.1
CBWD3-213ENST00000618217 GAGE2BQ13066 116 aa14.41□□□□□ -0.1
CBWD3-213ENST00000618217 ERG28Q9UKR5 140 aa14.41□□□□□ -0.1
CBWD3-213ENST00000618217 CDK2AP2O75956 126 aa14.4□□□□□ -0.1
CBWD3-213ENST00000618217 LINC00474Q9P2X8 69 aa14.4□□□□□ -0.1
CBWD3-213ENST00000618217 COX17Q14061 63 aa14.39□□□□□ -0.11
CBWD3-213ENST00000618217 HIGD1BQ9P298 99 aa14.39□□□□□ -0.11
CBWD3-213ENST00000618217 PFN2P35080 140 aa14.38□□□□□ -0.11
CBWD3-213ENST00000618217 GAGE2EQ4V326 116 aa14.38□□□□□ -0.11
CBWD3-213ENST00000618217 SCGB1D4Q6XE38 83 aa14.38□□□□□ -0.11
CBWD3-213ENST00000618217 GAGE2DQ9UEU5 116 aa14.38□□□□□ -0.11
CBWD3-213ENST00000618217 BIRC6Q9NR09 4857 aa14.38□□□□□ -0.11
CBWD3-213ENST00000618217 M0R143 59 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 HAMPP81172 84 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 BATFQ16520 125 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 SCXQ7RTU7 201 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 CIRBP-AS1Q8TBR5 109 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 SNHG12Q9BXW3 62 aa14.37□□□□□ -0.11
CBWD3-213ENST00000618217 APOBP04114 4563 aaKnown RBP14.36□□□□□ -0.11
CBWD3-213ENST00000618217 HINT1P49773 126 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms