RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 LINC00959A0A1B0GUT2 108 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 GYPEP15421 78 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 RPL28P46779 137 aaKnown RBP8.23□□□□□ -1.09
C11orf54-215ENST00000617482 SMIM11BQ8TCY0 68 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 XCL1P47992 114 aa8.22□□□□□ -1.09
C11orf54-215ENST00000617482 CLPSL2Q6UWE3 100 aa8.22□□□□□ -1.09
C11orf54-215ENST00000617482 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
C11orf54-215ENST00000617482 C6orf226Q5I0X4 101 aa8.22□□□□□ -1.09
C11orf54-215ENST00000617482 FAM19A5Q7Z5A7 132 aaPredicted RBP8.21□□□□□ -1.09
C11orf54-215ENST00000617482 HELZ2Q9BYK8 2649 aaKnown RBP8.21□□□□□ -1.1
C11orf54-215ENST00000617482 A0A087WYN8 130 aa8.21□□□□□ -1.1
C11orf54-215ENST00000617482 IBA57-AS1B1ANH7 110 aa8.21□□□□□ -1.1
C11orf54-215ENST00000617482 PAX4O43316 350 aa8.21□□□□□ -1.1
C11orf54-215ENST00000617482 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
C11orf54-215ENST00000617482 SMCR5Q8TEV8 140 aa8.21□□□□□ -1.1
C11orf54-215ENST00000617482 ATP5G1P05496 136 aa8.2□□□□□ -1.1
C11orf54-215ENST00000617482 ACYP1P07311 99 aa8.2□□□□□ -1.1
C11orf54-215ENST00000617482 GCN1Q92616 2671 aaKnown RBP8.2□□□□□ -1.1
C11orf54-215ENST00000617482 MALP21145 153 aa8.2□□□□□ -1.1
C11orf54-215ENST00000617482 KRTAP10-3P60369 221 aa8.2□□□□□ -1.1
C11orf54-215ENST00000617482 HILS1P60008 231 aa8.19□□□□□ -1.1
C11orf54-215ENST00000617482 FASNP49327 2511 aaKnown RBP8.19□□□□□ -1.1
C11orf54-215ENST00000617482 DNAL4O96015 105 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 GAGE2AQ6NT46 116 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 UNC79Q9P2D8 2635 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 TRBV7-7A0A0K0K1E9 115 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 DEFB4AO15263 64 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 SS18Q15532 418 aa8.18□□□□□ -1.1
C11orf54-215ENST00000617482 C9orf129Q5T035 196 aaKnown RBP8.18□□□□□ -1.1
C11orf54-215ENST00000617482 X6R8D5 127 aa8.17□□□□□ -1.1
C11orf54-215ENST00000617482 LINC00482Q8N8I6 264 aa8.17□□□□□ -1.1
C11orf54-215ENST00000617482 J3KT08 172 aa8.16□□□□□ -1.1
C11orf54-215ENST00000617482 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
C11orf54-215ENST00000617482 SPATA3Q8NHX4 192 aa8.16□□□□□ -1.1
C11orf54-215ENST00000617482 PRO0255Q9UI72 69 aa8.16□□□□□ -1.1
C11orf54-215ENST00000617482 VWFP04275 2813 aa8.16□□□□□ -1.1
C11orf54-215ENST00000617482 HIVEP2P31629 2446 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 LECT2O14960 151 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 SLPIP03973 132 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 INAFM2P0DMQ5 153 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 LINC00643Q86TS7 51 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 A0A1B0GUV1 79 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 H0YGX0 51 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 PRR3P79522 188 aaKnown RBP8.15□□□□□ -1.1
C11orf54-215ENST00000617482 Q8N3U1 123 aa8.15□□□□□ -1.1
C11orf54-215ENST00000617482 FAM236AA0A1B0GUQ0 79 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 FAM236BA0A1B0GV22 79 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 LINC00269Q8N2A0 174 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 IGLV10-54A0A075B6I4 117 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 A0A1B0GX51 115 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 C14orf132Q9NPU4 83 aa8.14□□□□□ -1.11
C11orf54-215ENST00000617482 RPS28P62857 69 aaKnown RBP8.13□□□□□ -1.11
C11orf54-215ENST00000617482 Q8IZM0 81 aa8.13□□□□□ -1.11
C11orf54-215ENST00000617482 PRO0628Q9UI54 55 aa8.13□□□□□ -1.11
C11orf54-215ENST00000617482 HECTD1Q9ULT8 2610 aa8.13□□□□□ -1.11
C11orf54-215ENST00000617482 LOC107984640A0A0U1RRK4 108 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 J3QKU1 62 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 DEFB135Q30KP9 77 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 SDIM1Q6ZPB5 146 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 IMUPQ9GZP8 106 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 NCR3O14931 201 aa8.12□□□□□ -1.11
C11orf54-215ENST00000617482 ANGP03950 147 aaKnown RBP8.11□□□□□ -1.11
C11orf54-215ENST00000617482 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-215ENST00000617482 C3orf56Q8N813 242 aa8.1□□□□□ -1.11
C11orf54-215ENST00000617482 CHCHD10Q8WYQ3 142 aaPredicted RBP8.1□□□□□ -1.11
C11orf54-215ENST00000617482 NOTCH2Q04721 2471 aa8.1□□□□□ -1.11
C11orf54-215ENST00000617482 J3QL48 77 aa8.1□□□□□ -1.11
C11orf54-215ENST00000617482 LY6G6DO95868 133 aa8.1□□□□□ -1.11
C11orf54-215ENST00000617482 KIAA0087Q14695 138 aa8.09□□□□□ -1.11
C11orf54-215ENST00000617482 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
C11orf54-215ENST00000617482 KMT2BQ9UMN6 2715 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-215ENST00000617482 REG3AQ06141 175 aa8.09□□□□□ -1.11
C11orf54-215ENST00000617482 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
C11orf54-215ENST00000617482 LYRM9A8MSI8 78 aa8.08□□□□□ -1.12
C11orf54-215ENST00000617482 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
C11orf54-215ENST00000617482 IGHV4-28A0A0C4DH34 117 aa8.08□□□□□ -1.12
C11orf54-215ENST00000617482 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
C11orf54-215ENST00000617482 OBSCN-AS1Q96MR7 158 aa8.08□□□□□ -1.12
C11orf54-215ENST00000617482 KLK5Q9Y337 293 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-215ENST00000617482 OTOGQ6ZRI0 2925 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 DAD1P61803 113 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 LINC00846Q9NV44 126 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 ORMDL1Q9P0S3 153 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 HTN3P15516 51 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 CELA1Q9UNI1 258 aa8.07□□□□□ -1.12
C11orf54-215ENST00000617482 LINC01561Q8N1V8 128 aa8.06□□□□□ -1.12
C11orf54-215ENST00000617482 LINC00526Q96FQ7 95 aa8.06□□□□□ -1.12
C11orf54-215ENST00000617482 IGKV3D-7A0A0C4DH55 119 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 GHRHP01286 108 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 C9orf66Q5T8R8 295 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 Q8NDZ9 215 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 C6orf223Q8N319 242 aa8.05□□□□□ -1.12
C11orf54-215ENST00000617482 CXCL5P42830 114 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 COX17Q14061 63 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 Q8N814 137 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 LINC00336Q6ZUF6 198 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 TRRAPQ9Y4A5 3859 aa8.04□□□□□ -1.12
C11orf54-215ENST00000617482 INAFM1C9JVW0 142 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 156.8 ms