RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 PRR4Q16378 134 aa12.37□□□□□ -0.43
TRAPPC3-208ENST00000616074 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
TRAPPC3-208ENST00000616074 HERVK_113P63121 156 aa12.36□□□□□ -0.43
TRAPPC3-208ENST00000616074 LBHQ53QV2 105 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC3-208ENST00000616074 NXT2Q9NPJ8 142 aaKnown RBP12.35□□□□□ -0.43
TRAPPC3-208ENST00000616074 F8VRH5 84 aa12.34□□□□□ -0.43
TRAPPC3-208ENST00000616074 SEC11AP67812 179 aa12.34□□□□□ -0.43
TRAPPC3-208ENST00000616074 CTDSP1Q9GZU7 261 aa12.34□□□□□ -0.43
TRAPPC3-208ENST00000616074 PAPPA-AS1Q5QFB9 102 aa12.33□□□□□ -0.44
TRAPPC3-208ENST00000616074 TIMM17AQ99595 171 aa12.33□□□□□ -0.44
TRAPPC3-208ENST00000616074 GEMIN7Q9H840 131 aaKnown RBP12.33□□□□□ -0.44
TRAPPC3-208ENST00000616074 MRPL55Q7Z7F7 128 aaKnown RBP12.32□□□□□ -0.44
TRAPPC3-208ENST00000616074 TOMM6Q96B49 74 aa12.32□□□□□ -0.44
TRAPPC3-208ENST00000616074 TP73-AS1Q9UF72 201 aa12.32□□□□□ -0.44
TRAPPC3-208ENST00000616074 CXCL5P42830 114 aa12.3□□□□□ -0.44
TRAPPC3-208ENST00000616074 SMIM1B2RUZ4 78 aa12.29□□□□□ -0.44
TRAPPC3-208ENST00000616074 G0S2P27469 103 aa12.29□□□□□ -0.44
TRAPPC3-208ENST00000616074 A0A087X002 238 aa12.28□□□□□ -0.44
TRAPPC3-208ENST00000616074 BCE1O60756 84 aa12.28□□□□□ -0.44
TRAPPC3-208ENST00000616074 KIAA1644Q3SXP7 199 aa12.28□□□□□ -0.44
TRAPPC3-208ENST00000616074 TSPAN13O95857 204 aa12.27□□□□□ -0.45
TRAPPC3-208ENST00000616074 RPL28P46779 137 aaKnown RBP12.27□□□□□ -0.45
TRAPPC3-208ENST00000616074 ERASQ7Z444 233 aa12.27□□□□□ -0.45
TRAPPC3-208ENST00000616074 ADCYAP1P18509 176 aa12.26□□□□□ -0.45
TRAPPC3-208ENST00000616074 COX7B2Q8TF08 81 aa12.26□□□□□ -0.45
TRAPPC3-208ENST00000616074 LINC00167Q96N53 147 aa12.26□□□□□ -0.45
TRAPPC3-208ENST00000616074 SCGB3A1Q96QR1 104 aa12.26□□□□□ -0.45
TRAPPC3-208ENST00000616074 RPL37AP8A6NKH3 93 aa12.25□□□□□ -0.45
TRAPPC3-208ENST00000616074 PDZD11Q5EBL8 140 aa12.25□□□□□ -0.45
TRAPPC3-208ENST00000616074 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
TRAPPC3-208ENST00000616074 IGLV5-45A0A087WSX0 123 aa12.23□□□□□ -0.45
TRAPPC3-208ENST00000616074 GAGE10A6NGK3 116 aa12.23□□□□□ -0.45
TRAPPC3-208ENST00000616074 RAB14P61106 215 aa12.23□□□□□ -0.45
TRAPPC3-208ENST00000616074 CRYGAP11844 174 aa12.22□□□□□ -0.45
TRAPPC3-208ENST00000616074 SPINK8P0C7L1 97 aa12.21□□□□□ -0.45
TRAPPC3-208ENST00000616074 RAB5BP61020 215 aa12.21□□□□□ -0.45
TRAPPC3-208ENST00000616074 TYMSOSQ8TAI1 123 aa12.21□□□□□ -0.45
TRAPPC3-208ENST00000616074 ANAPC11Q9NYG5 84 aa12.2□□□□□ -0.46
TRAPPC3-208ENST00000616074 IGLV5-37A0A075B6J1 123 aa12.19□□□□□ -0.46
TRAPPC3-208ENST00000616074 CST9LQ9H4G1 147 aa12.19□□□□□ -0.46
TRAPPC3-208ENST00000616074 LINC01546A6NGU7 62 aa12.18□□□□□ -0.46
TRAPPC3-208ENST00000616074 KRTAP13-1Q8IUC0 172 aa12.18□□□□□ -0.46
TRAPPC3-208ENST00000616074 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
TRAPPC3-208ENST00000616074 TRAV9-1A0A075B6T8 112 aa12.16□□□□□ -0.46
TRAPPC3-208ENST00000616074 LINC01549A6NIU2 74 aa12.16□□□□□ -0.46
TRAPPC3-208ENST00000616074 UBE2AP49459 152 aa12.16□□□□□ -0.46
TRAPPC3-208ENST00000616074 PMVKQ15126 192 aa12.16□□□□□ -0.46
TRAPPC3-208ENST00000616074 KRTAP13-2Q52LG2 175 aa12.16□□□□□ -0.46
TRAPPC3-208ENST00000616074 SCO1O75880 301 aa12.15□□□□□ -0.46
TRAPPC3-208ENST00000616074 CLLU1Q5K131 121 aa12.14□□□□□ -0.47
TRAPPC3-208ENST00000616074 GNB1LQ9BYB4 327 aa12.14□□□□□ -0.47
TRAPPC3-208ENST00000616074 IGKV2-28A0A075B6P5 120 aa12.13□□□□□ -0.47
TRAPPC3-208ENST00000616074 IGKV2D-28P01615 120 aa12.13□□□□□ -0.47
TRAPPC3-208ENST00000616074 MRPL18Q9H0U6 180 aaKnown RBP12.13□□□□□ -0.47
TRAPPC3-208ENST00000616074 ATP5LO75964 103 aa12.12□□□□□ -0.47
TRAPPC3-208ENST00000616074 A0A0U1RQV1 116 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 TMEM218A2RU14 115 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 H3BRM9 83 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 PFN2P35080 140 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 FA2HQ7L5A8 372 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 FAT4Q6V0I7 4981 aa12.11□□□□□ -0.47
TRAPPC3-208ENST00000616074 FAM229BQ4G0N7 80 aa12.1□□□□□ -0.47
TRAPPC3-208ENST00000616074 RETNLBQ9BQ08 111 aa12.1□□□□□ -0.47
TRAPPC3-208ENST00000616074 SMCO4Q9NRQ5 59 aa12.1□□□□□ -0.47
TRAPPC3-208ENST00000616074 IGLC3P0DOY3 106 aa12.09□□□□□ -0.47
TRAPPC3-208ENST00000616074 S100PP25815 95 aa12.09□□□□□ -0.47
TRAPPC3-208ENST00000616074 PRLHP81277 87 aa12.09□□□□□ -0.47
TRAPPC3-208ENST00000616074 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
TRAPPC3-208ENST00000616074 MUC17Q685J3 4493 aa12.09□□□□□ -0.47
TRAPPC3-208ENST00000616074 IGLV5-39A0A0G2JS06 123 aa12.08□□□□□ -0.48
TRAPPC3-208ENST00000616074 LINC00304Q8N9R0 145 aa12.08□□□□□ -0.48
TRAPPC3-208ENST00000616074 VPREB1P12018 145 aa12.07□□□□□ -0.48
TRAPPC3-208ENST00000616074 ZNF22P17026 224 aaPredicted RBP12.06□□□□□ -0.48
TRAPPC3-208ENST00000616074 FABP9Q0Z7S8 132 aa12.06□□□□□ -0.48
TRAPPC3-208ENST00000616074 TMEM126AQ9H061 195 aa12.06□□□□□ -0.48
TRAPPC3-208ENST00000616074 SND1-IT1Q9HBX3 110 aa12.06□□□□□ -0.48
TRAPPC3-208ENST00000616074 A0A096LNJ9 63 aa12.05□□□□□ -0.48
TRAPPC3-208ENST00000616074 TMEM238C9JI98 176 aa12.05□□□□□ -0.48
TRAPPC3-208ENST00000616074 COX19Q49B96 90 aa12.05□□□□□ -0.48
TRAPPC3-208ENST00000616074 FAM19A1Q7Z5A9 133 aa12.05□□□□□ -0.48
TRAPPC3-208ENST00000616074 ERG28Q9UKR5 140 aa12.05□□□□□ -0.48
TRAPPC3-208ENST00000616074 NDUFA6P56556 154 aa12.04□□□□□ -0.48
TRAPPC3-208ENST00000616074 SEC11CQ9BY50 192 aa12.04□□□□□ -0.48
TRAPPC3-208ENST00000616074 IGKV2D-26A0A0A0MRZ7 120 aa12.03□□□□□ -0.48
TRAPPC3-208ENST00000616074 Q8NDZ9 215 aa12.03□□□□□ -0.48
TRAPPC3-208ENST00000616074 M0R378 163 aa12.02□□□□□ -0.49
TRAPPC3-208ENST00000616074 URB1-AS1Q96HZ7 61 aa12.02□□□□□ -0.49
TRAPPC3-208ENST00000616074 ZNF625Q96I27 306 aaPredicted RBP12.02□□□□□ -0.49
TRAPPC3-208ENST00000616074 RPL24P83731 157 aaKnown RBP12.01□□□□□ -0.49
TRAPPC3-208ENST00000616074 COX17Q14061 63 aa12.01□□□□□ -0.49
TRAPPC3-208ENST00000616074 IFITM2Q01629 132 aa11.98□□□□□ -0.49
TRAPPC3-208ENST00000616074 PMCHL1Q16048 86 aa11.98□□□□□ -0.49
TRAPPC3-208ENST00000616074 TPRXLQ17RH7 258 aa11.98□□□□□ -0.49
TRAPPC3-208ENST00000616074 PLEKHB2Q96CS7 222 aa11.98□□□□□ -0.49
TRAPPC3-208ENST00000616074 C11orf86A6NJI1 115 aa11.97□□□□□ -0.49
TRAPPC3-208ENST00000616074 HBDP02042 147 aa11.97□□□□□ -0.49
TRAPPC3-208ENST00000616074 LCE2AQ5TA79 106 aaPredicted RBP11.97□□□□□ -0.49
TRAPPC3-208ENST00000616074 C3orf22Q8N5N4 141 aa11.97□□□□□ -0.49
TRAPPC3-208ENST00000616074 C18orf32Q8TCD1 76 aa11.97□□□□□ -0.49
TRAPPC3-208ENST00000616074 CDIP1Q9H305 208 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms