RNA–Protein interactions for RNA: ENST00000615505.4

SURF1-205, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 1 (best) BASIC

Gene SURF1, Length 991 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-205ENST00000615505 C2orf82Q6UX34 121 aa15.97■□□□□ 0.15
SURF1-205ENST00000615505 IGLV5-45A0A087WSX0 123 aa15.96■□□□□ 0.15
SURF1-205ENST00000615505 TLX1NBP0CAT3 122 aa15.96■□□□□ 0.15
SURF1-205ENST00000615505 BAGE3Q86Y29 109 aa15.95■□□□□ 0.14
SURF1-205ENST00000615505 FLG2Q5D862 2391 aaPredicted RBP15.94■□□□□ 0.14
SURF1-205ENST00000615505 COLCA2A8K830 154 aa15.93■□□□□ 0.14
SURF1-205ENST00000615505 SMIM1B2RUZ4 78 aa15.92■□□□□ 0.14
SURF1-205ENST00000615505 H3BRM9 83 aa15.92■□□□□ 0.14
SURF1-205ENST00000615505 HSBP1O75506 76 aa15.91■□□□□ 0.14
SURF1-205ENST00000615505 IGLC3P0DOY3 106 aa15.91■□□□□ 0.14
SURF1-205ENST00000615505 Q6ZRP5 223 aa15.91■□□□□ 0.14
SURF1-205ENST00000615505 CXCL5P42830 114 aa15.9■□□□□ 0.14
SURF1-205ENST00000615505 A0A1W2PNN7 141 aa15.89■□□□□ 0.13
SURF1-205ENST00000615505 C9orf116Q5BN46 136 aaPredicted RBP15.89■□□□□ 0.13
SURF1-205ENST00000615505 NDUFC2-KCTD14E9PQ53 114 aa15.88■□□□□ 0.13
SURF1-205ENST00000615505 SPINK8P0C7L1 97 aa15.88■□□□□ 0.13
SURF1-205ENST00000615505 GAGE2EQ4V326 116 aa15.88■□□□□ 0.13
SURF1-205ENST00000615505 COX7B2Q8TF08 81 aa15.88■□□□□ 0.13
SURF1-205ENST00000615505 GAGE2DQ9UEU5 116 aa15.88■□□□□ 0.13
SURF1-205ENST00000615505 F8VRH5 84 aa15.87■□□□□ 0.13
SURF1-205ENST00000615505 IFI27L1Q96BM0 104 aa15.86■□□□□ 0.13
SURF1-205ENST00000615505 FAM19A2Q8N3H0 131 aa15.84■□□□□ 0.13
SURF1-205ENST00000615505 ZNF22P17026 224 aaPredicted RBP15.83■□□□□ 0.12
SURF1-205ENST00000615505 CHTOPQ9Y3Y2 248 aaKnown RBP15.83■□□□□ 0.12
SURF1-205ENST00000615505 SCO1O75880 301 aa15.82■□□□□ 0.12
SURF1-205ENST00000615505 SERF1AO75920 110 aa15.82■□□□□ 0.12
SURF1-205ENST00000615505 TRAV12-1A0A0B4J245 112 aa15.81■□□□□ 0.12
SURF1-205ENST00000615505 HNRNPA3P51991 378 aaKnown RBP15.81■□□□□ 0.12
SURF1-205ENST00000615505 C11orf86A6NJI1 115 aa15.8■□□□□ 0.12
SURF1-205ENST00000615505 PRR3P79522 188 aaKnown RBP15.8■□□□□ 0.12
SURF1-205ENST00000615505 TMEM170BQ5T4T1 132 aa15.79■□□□□ 0.12
SURF1-205ENST00000615505 IGLV5-39A0A0G2JS06 123 aa15.78■□□□□ 0.12
SURF1-205ENST00000615505 FAM168BA1KXE4 195 aa15.78■□□□□ 0.12
SURF1-205ENST00000615505 DMBT1Q9UGM3 2413 aaPredicted RBP15.77■□□□□ 0.12
SURF1-205ENST00000615505 KRTAP29-1A8MX34 341 aaPredicted RBP15.77■□□□□ 0.12
SURF1-205ENST00000615505 J3QL48 77 aa15.77■□□□□ 0.12
SURF1-205ENST00000615505 LINC00310P59036 64 aa15.77■□□□□ 0.12
SURF1-205ENST00000615505 FAM19A5Q7Z5A7 132 aaPredicted RBP15.77■□□□□ 0.12
SURF1-205ENST00000615505 MYCBP2O75592 4640 aa15.77■□□□□ 0.11
SURF1-205ENST00000615505 LEPROTL1O95214 131 aa15.76■□□□□ 0.11
SURF1-205ENST00000615505 C9orf129Q5T035 196 aaKnown RBP15.76■□□□□ 0.11
SURF1-205ENST00000615505 PHF5AQ7RTV0 110 aaKnown RBP15.76■□□□□ 0.11
SURF1-205ENST00000615505 OXTP01178 125 aa15.74■□□□□ 0.11
SURF1-205ENST00000615505 NUPR1O60356 82 aa15.72■□□□□ 0.11
SURF1-205ENST00000615505 XAGE1AQ9HD64 81 aa15.72■□□□□ 0.11
SURF1-205ENST00000615505 HSPB8Q9UJY1 196 aa15.72■□□□□ 0.11
SURF1-205ENST00000615505 H0Y8G0 127 aa15.7■□□□□ 0.1
SURF1-205ENST00000615505 M0QXV9 152 aa15.7■□□□□ 0.1
SURF1-205ENST00000615505 KRTAP7-1Q8IUC3 87 aa15.69■□□□□ 0.1
SURF1-205ENST00000615505 PSORS1C2Q9UIG4 136 aa15.69■□□□□ 0.1
SURF1-205ENST00000615505 TMEM223A0PJW6 202 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BKO60814 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BJP06899 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 FABP4P15090 132 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BOP23527 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BBP33778 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BDP58876 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BCP62807 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST2H2BEQ16778 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.68■□□□□ 0.1
SURF1-205ENST00000615505 SFTA2Q6UW10 78 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BHQ93079 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BNQ99877 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 HIST1H2BMQ99879 126 aa15.68■□□□□ 0.1
SURF1-205ENST00000615505 ODF1Q14990 250 aa15.67■□□□□ 0.1
SURF1-205ENST00000615505 UBE2BP63146 152 aa15.65■□□□□ 0.1
SURF1-205ENST00000615505 SPINK6Q6UWN8 80 aa15.65■□□□□ 0.1
SURF1-205ENST00000615505 C1orf137Q5JT78 98 aa15.64■□□□□ 0.09
SURF1-205ENST00000615505 SERTAD4-AS1Q5TG53 156 aa15.64■□□□□ 0.09
SURF1-205ENST00000615505 PFN2P35080 140 aa15.63■□□□□ 0.09
SURF1-205ENST00000615505 COX17Q14061 63 aa15.62■□□□□ 0.09
SURF1-205ENST00000615505 ZNF625Q96I27 306 aaPredicted RBP15.62■□□□□ 0.09
SURF1-205ENST00000615505 ERG28Q9UKR5 140 aa15.62■□□□□ 0.09
SURF1-205ENST00000615505 C22orf24Q9Y442 160 aa15.62■□□□□ 0.09
SURF1-205ENST00000615505 PLNP26678 52 aa15.61■□□□□ 0.09
SURF1-205ENST00000615505 SRSF9Q13242 221 aaKnown RBP eCLIP15.61■□□□□ 0.09
SURF1-205ENST00000615505 LBHQ53QV2 105 aaPredicted RBP15.61■□□□□ 0.09
SURF1-205ENST00000615505 MAP1LC3CQ9BXW4 147 aa15.61■□□□□ 0.09
SURF1-205ENST00000615505 KRTAP11-1Q8IUC1 163 aa15.59■□□□□ 0.09
SURF1-205ENST00000615505 TP73-AS1Q9UF72 201 aa15.59■□□□□ 0.09
SURF1-205ENST00000615505 PLA2G2DQ9UNK4 145 aa15.59■□□□□ 0.09
SURF1-205ENST00000615505 S100A1P23297 94 aa15.58■□□□□ 0.08
SURF1-205ENST00000615505 DPM2O94777 84 aa15.57■□□□□ 0.08
SURF1-205ENST00000615505 MRPL55Q7Z7F7 128 aaKnown RBP15.56■□□□□ 0.08
SURF1-205ENST00000615505 LRP1Q07954 4544 aaKnown RBP15.55■□□□□ 0.08
SURF1-205ENST00000615505 PKHD1L1Q86WI1 4243 aa15.55■□□□□ 0.08
SURF1-205ENST00000615505 IGLV7-43P04211 117 aa15.55■□□□□ 0.08
SURF1-205ENST00000615505 REG3GQ6UW15 175 aa15.55■□□□□ 0.08
SURF1-205ENST00000615505 PMCHL2Q9BQD1 86 aa15.54■□□□□ 0.08
SURF1-205ENST00000615505 IGKCP01834 107 aa15.53■□□□□ 0.08
SURF1-205ENST00000615505 NKAPP1Q8N9T2 125 aa15.53■□□□□ 0.08
SURF1-205ENST00000615505 SND1-IT1Q9HBX3 110 aa15.53■□□□□ 0.08
SURF1-205ENST00000615505 LINC00158P58513 81 aa15.52■□□□□ 0.08
SURF1-205ENST00000615505 HERVK_113P61574 105 aa15.52■□□□□ 0.08
SURF1-205ENST00000615505 IGLV5-37A0A075B6J1 123 aa15.51■□□□□ 0.07
SURF1-205ENST00000615505 HERV-K104P63124 156 aa15.51■□□□□ 0.07
SURF1-205ENST00000615505 NDUFA12Q9UI09 145 aa15.51■□□□□ 0.07
SURF1-205ENST00000615505 LEPROTO15243 131 aa15.5■□□□□ 0.07
SURF1-205ENST00000615505 COA6Q5JTJ3 125 aaKnown RBP15.5■□□□□ 0.07
SURF1-205ENST00000615505 PLEKHB2Q96CS7 222 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms