RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 NAV2Q8IVL1 2488 aa12.42□□□□□ -0.42
HMGXB3-206ENST00000613459 LY6G6CO95867 125 aa12.41□□□□□ -0.42
HMGXB3-206ENST00000613459 C9orf116Q5BN46 136 aaPredicted RBP12.41□□□□□ -0.42
HMGXB3-206ENST00000613459 C6orf223Q8N319 242 aa12.41□□□□□ -0.42
HMGXB3-206ENST00000613459 LINC01547P58512 204 aaPredicted RBP12.41□□□□□ -0.42
HMGXB3-206ENST00000613459 LINC00575Q6W349 94 aa12.4□□□□□ -0.42
HMGXB3-206ENST00000613459 CDSNQ15517 529 aa12.4□□□□□ -0.42
HMGXB3-206ENST00000613459 TMEM254Q8TBM7 123 aa12.4□□□□□ -0.42
HMGXB3-206ENST00000613459 H0Y9P7 68 aa12.4□□□□□ -0.43
HMGXB3-206ENST00000613459 LRP4O75096 1905 aa12.4□□□□□ -0.43
HMGXB3-206ENST00000613459 CXCL6P80162 114 aa12.39□□□□□ -0.43
HMGXB3-206ENST00000613459 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
HMGXB3-206ENST00000613459 IGHV6-1A0A0B4J1U7 121 aa12.38□□□□□ -0.43
HMGXB3-206ENST00000613459 hDV103S1A0JD37 113 aa12.38□□□□□ -0.43
HMGXB3-206ENST00000613459 LINC01546A6NGU7 62 aa12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 Q9BRP9 147 aa12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 PRR3P79522 188 aaKnown RBP12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 PSPHP1O15172 72 aa12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 OXLD1Q5BKU9 147 aa12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
HMGXB3-206ENST00000613459 EDN2P20800 178 aa12.36□□□□□ -0.43
HMGXB3-206ENST00000613459 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
HMGXB3-206ENST00000613459 LINC00846Q9NV44 126 aa12.35□□□□□ -0.43
HMGXB3-206ENST00000613459 Q8N2B8 174 aa12.34□□□□□ -0.43
HMGXB3-206ENST00000613459 IGLV5-52A0A0A0MRZ9 124 aa12.33□□□□□ -0.44
HMGXB3-206ENST00000613459 PRO0461Q9UI25 63 aa12.33□□□□□ -0.44
HMGXB3-206ENST00000613459 SMCPP49901 116 aaPredicted RBP12.33□□□□□ -0.44
HMGXB3-206ENST00000613459 PCOTHQ58A44 107 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 C2CD3Q4AC94 2353 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 CCDC168Q8NDH2 2452 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 BCE1O60756 84 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 SRCAPQ6ZRS2 3230 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 LYPD5Q6UWN5 251 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 Q6ZTC4 211 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 EML5Q05BV3 1969 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
HMGXB3-206ENST00000613459 A0A1B0GW54 56 aa12.31□□□□□ -0.44
HMGXB3-206ENST00000613459 LIMD2Q9BT23 127 aa12.3□□□□□ -0.44
HMGXB3-206ENST00000613459 IGLV5-39A0A0G2JS06 123 aa12.3□□□□□ -0.44
HMGXB3-206ENST00000613459 PRO0628Q9UI54 55 aa12.3□□□□□ -0.44
HMGXB3-206ENST00000613459 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
HMGXB3-206ENST00000613459 COL5A1P20908 1838 aaPredicted RBP12.29□□□□□ -0.44
HMGXB3-206ENST00000613459 A0A087WSZ3 146 aa12.29□□□□□ -0.44
HMGXB3-206ENST00000613459 KIF25-AS1Q9Y6Z4 181 aa12.29□□□□□ -0.44
HMGXB3-206ENST00000613459 NCOR2Q9Y618 2525 aa12.29□□□□□ -0.44
HMGXB3-206ENST00000613459 PIEZO2Q9H5I5 2752 aa12.28□□□□□ -0.44
HMGXB3-206ENST00000613459 Q6ZSN1 163 aa12.28□□□□□ -0.44
HMGXB3-206ENST00000613459 IGF2RP11717 2491 aa12.28□□□□□ -0.44
HMGXB3-206ENST00000613459 ARHGAP32A7KAX9 2087 aa12.28□□□□□ -0.44
HMGXB3-206ENST00000613459 RETNQ9HD89 108 aa12.27□□□□□ -0.44
HMGXB3-206ENST00000613459 CRYGAP11844 174 aa12.27□□□□□ -0.45
HMGXB3-206ENST00000613459 LINC01556Q5JQF7 62 aa12.26□□□□□ -0.45
HMGXB3-206ENST00000613459 LINC00337Q8N6G1 96 aa12.25□□□□□ -0.45
HMGXB3-206ENST00000613459 PIEZO1Q92508 2521 aa12.24□□□□□ -0.45
HMGXB3-206ENST00000613459 CPAMD8Q8IZJ3 1885 aa12.24□□□□□ -0.45
HMGXB3-206ENST00000613459 NHLRC4P0CG21 123 aaPredicted RBP12.23□□□□□ -0.45
HMGXB3-206ENST00000613459 C1orf64Q8NEQ6 169 aa12.22□□□□□ -0.45
HMGXB3-206ENST00000613459 C1orf134Q5TEV5 83 aa12.22□□□□□ -0.45
HMGXB3-206ENST00000613459 Q6ZRU5 148 aa12.22□□□□□ -0.45
HMGXB3-206ENST00000613459 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
HMGXB3-206ENST00000613459 KRTAP10-9P60411 292 aa12.21□□□□□ -0.45
HMGXB3-206ENST00000613459 ABCA2Q9BZC7 2435 aa12.21□□□□□ -0.46
HMGXB3-206ENST00000613459 RPS28P62857 69 aaKnown RBP12.2□□□□□ -0.46
HMGXB3-206ENST00000613459 RETNLBQ9BQ08 111 aa12.2□□□□□ -0.46
HMGXB3-206ENST00000613459 TP53AIP1Q9HCN2 124 aa12.2□□□□□ -0.46
HMGXB3-206ENST00000613459 A0A1W2PPR1 153 aa12.2□□□□□ -0.46
HMGXB3-206ENST00000613459 FAM19A4Q96LR4 140 aa12.2□□□□□ -0.46
HMGXB3-206ENST00000613459 FSHBP01225 129 aa12.19□□□□□ -0.46
HMGXB3-206ENST00000613459 SMIM29Q86T20 159 aa12.19□□□□□ -0.46
HMGXB3-206ENST00000613459 IGLV5-45A0A087WSX0 123 aa12.18□□□□□ -0.46
HMGXB3-206ENST00000613459 MYO9AB2RTY4 2548 aa12.18□□□□□ -0.46
HMGXB3-206ENST00000613459 DEFB116Q30KQ4 102 aa12.18□□□□□ -0.46
HMGXB3-206ENST00000613459 C22orf24Q9Y442 160 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 PRRC2AP48634 2157 aaKnown RBP12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 IGHV3OR16-9A0A0B4J2B5 98 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 TLN1Q9Y490 2541 aaKnown RBP12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 SMCR5Q8TEV8 140 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 H3BNG1 76 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 SPINK1P00995 79 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 SPATA3Q8NHX4 192 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 X6R8D5 127 aa12.17□□□□□ -0.46
HMGXB3-206ENST00000613459 SBSPONQ8IVN8 264 aa12.16□□□□□ -0.46
HMGXB3-206ENST00000613459 SMR3AQ99954 134 aa12.15□□□□□ -0.46
HMGXB3-206ENST00000613459 A8MTW9 85 aa12.15□□□□□ -0.47
HMGXB3-206ENST00000613459 H3BPC8 53 aa12.15□□□□□ -0.47
HMGXB3-206ENST00000613459 C4orf26Q17RF5 130 aa12.14□□□□□ -0.47
HMGXB3-206ENST00000613459 LINC00315P59091 139 aa12.13□□□□□ -0.47
HMGXB3-206ENST00000613459 RAI1Q7Z5J4 1906 aaPredicted RBP12.12□□□□□ -0.47
HMGXB3-206ENST00000613459 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
HMGXB3-206ENST00000613459 FHL3Q13643 280 aa12.11□□□□□ -0.47
HMGXB3-206ENST00000613459 A0A1B0GU69 56 aa12.11□□□□□ -0.47
HMGXB3-206ENST00000613459 ACYP2P14621 99 aa12.09□□□□□ -0.47
HMGXB3-206ENST00000613459 PRLHP81277 87 aa12.09□□□□□ -0.47
HMGXB3-206ENST00000613459 LOC110117498A0A087WWA1 95 aa12.08□□□□□ -0.48
HMGXB3-206ENST00000613459 AGRNO00468 2067 aa12.08□□□□□ -0.48
HMGXB3-206ENST00000613459 C7orf65Q6ZTY9 151 aa12.08□□□□□ -0.48
HMGXB3-206ENST00000613459 ELOF1P60002 83 aaKnown RBP12.07□□□□□ -0.48
HMGXB3-206ENST00000613459 ADAMTS20P59510 1910 aa12.06□□□□□ -0.48
HMGXB3-206ENST00000613459 SPAG11AQ6PDA7 123 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms