RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 FAM19A3Q7Z5A8 133 aa10.38□□□□□ -0.75
VPS36-207ENST00000611132 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.38□□□□□ -0.75
VPS36-207ENST00000611132 CHD8Q9HCK8 2581 aa10.38□□□□□ -0.75
VPS36-207ENST00000611132 MIFP14174 115 aa10.37□□□□□ -0.75
VPS36-207ENST00000611132 ZNF575Q86XF7 245 aa10.37□□□□□ -0.75
VPS36-207ENST00000611132 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
VPS36-207ENST00000611132 UNC80Q8N2C7 3258 aa10.37□□□□□ -0.75
VPS36-207ENST00000611132 ZNF73O43830 326 aaPredicted RBP10.36□□□□□ -0.75
VPS36-207ENST00000611132 UBE2DNLQ8IWF7 75 aa10.36□□□□□ -0.75
VPS36-207ENST00000611132 C3orf84H3BNL1 204 aa10.36□□□□□ -0.75
VPS36-207ENST00000611132 FHL2Q14192 279 aa10.35□□□□□ -0.75
VPS36-207ENST00000611132 IGHV3OR16-9A0A0B4J2B5 98 aa10.35□□□□□ -0.75
VPS36-207ENST00000611132 UNQ6190/PRO20217Q6UXQ8 127 aa10.35□□□□□ -0.75
VPS36-207ENST00000611132 Q8N3U1 123 aa10.35□□□□□ -0.75
VPS36-207ENST00000611132 CYSRT1A8MQ03 144 aa10.35□□□□□ -0.75
VPS36-207ENST00000611132 SMCR5Q8TEV8 140 aa10.34□□□□□ -0.75
VPS36-207ENST00000611132 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
VPS36-207ENST00000611132 EIF4EBP3O60516 100 aaPredicted RBP10.33□□□□□ -0.76
VPS36-207ENST00000611132 SPTBN4Q9H254 2564 aa10.33□□□□□ -0.76
VPS36-207ENST00000611132 M0R378 163 aa10.33□□□□□ -0.76
VPS36-207ENST00000611132 Q6ZVQ6 151 aa10.32□□□□□ -0.76
VPS36-207ENST00000611132 ZNF843Q8N446 348 aa10.32□□□□□ -0.76
VPS36-207ENST00000611132 LINC00482Q8N8I6 264 aa10.32□□□□□ -0.76
VPS36-207ENST00000611132 KIR2DL5BQ8NHK3 375 aa10.32□□□□□ -0.76
VPS36-207ENST00000611132 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.31□□□□□ -0.76
VPS36-207ENST00000611132 LINC01006Q8NI28 216 aa10.31□□□□□ -0.76
VPS36-207ENST00000611132 LINC00575Q6W349 94 aa10.31□□□□□ -0.76
VPS36-207ENST00000611132 A0A1B0GUV1 79 aa10.3□□□□□ -0.76
VPS36-207ENST00000611132 LELP1Q5T871 98 aa10.3□□□□□ -0.76
VPS36-207ENST00000611132 LINC01547P58512 204 aaPredicted RBP10.3□□□□□ -0.76
VPS36-207ENST00000611132 POLQO75417 2590 aa10.29□□□□□ -0.76
VPS36-207ENST00000611132 JMJD1CQ15652 2540 aa10.28□□□□□ -0.76
VPS36-207ENST00000611132 V9GYY9 64 aa10.28□□□□□ -0.76
VPS36-207ENST00000611132 MTORP42345 2549 aa10.27□□□□□ -0.76
VPS36-207ENST00000611132 IGKV2-28A0A075B6P5 120 aa10.27□□□□□ -0.77
VPS36-207ENST00000611132 IGKV2D-28P01615 120 aa10.27□□□□□ -0.77
VPS36-207ENST00000611132 LINC01561Q8N1V8 128 aa10.27□□□□□ -0.77
VPS36-207ENST00000611132 A8MTW9 85 aa10.27□□□□□ -0.77
VPS36-207ENST00000611132 IGLV1-51P01701 117 aa10.27□□□□□ -0.77
VPS36-207ENST00000611132 SYCNQ0VAF6 134 aa10.26□□□□□ -0.77
VPS36-207ENST00000611132 NDUFB1O75438 58 aa10.26□□□□□ -0.77
VPS36-207ENST00000611132 LRRK2Q5S007 2527 aa10.26□□□□□ -0.77
VPS36-207ENST00000611132 NDUFS5O43920 106 aa10.24□□□□□ -0.77
VPS36-207ENST00000611132 PLA2G2AP14555 144 aa10.24□□□□□ -0.77
VPS36-207ENST00000611132 C4orf26Q17RF5 130 aa10.24□□□□□ -0.77
VPS36-207ENST00000611132 C1orf195Q5TG92 126 aa10.24□□□□□ -0.77
VPS36-207ENST00000611132 TMEM254Q8TBM7 123 aa10.24□□□□□ -0.77
VPS36-207ENST00000611132 CXCL6P80162 114 aa10.23□□□□□ -0.77
VPS36-207ENST00000611132 BCE1O60756 84 aa10.23□□□□□ -0.77
VPS36-207ENST00000611132 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
VPS36-207ENST00000611132 PRYO14603 147 aa10.23□□□□□ -0.77
VPS36-207ENST00000611132 C6orf223Q8N319 242 aa10.22□□□□□ -0.77
VPS36-207ENST00000611132 DHRS4-AS1Q9P1J3 65 aa10.22□□□□□ -0.77
VPS36-207ENST00000611132 LINC01600Q96MT4 127 aa10.22□□□□□ -0.77
VPS36-207ENST00000611132 FAM30AQ9NZY2 134 aa10.21□□□□□ -0.77
VPS36-207ENST00000611132 EGFEM1PQ0D2K5 195 aa10.21□□□□□ -0.78
VPS36-207ENST00000611132 PRR4Q16378 134 aa10.21□□□□□ -0.78
VPS36-207ENST00000611132 TRBV7-6A0A0J9YX20 115 aa10.2□□□□□ -0.78
VPS36-207ENST00000611132 HIGD2AQ9BW72 106 aa10.2□□□□□ -0.78
VPS36-207ENST00000611132 PRO0628Q9UI54 55 aa10.19□□□□□ -0.78
VPS36-207ENST00000611132 TRIOO75962 3097 aa10.19□□□□□ -0.78
VPS36-207ENST00000611132 ANKRD17O75179 2603 aaKnown RBP10.18□□□□□ -0.78
VPS36-207ENST00000611132 ZFYVE26Q68DK2 2539 aa10.18□□□□□ -0.78
VPS36-207ENST00000611132 H0Y9J4 135 aa10.18□□□□□ -0.78
VPS36-207ENST00000611132 J3QKU1 62 aa10.17□□□□□ -0.78
VPS36-207ENST00000611132 WFDC10BQ8IUB3 73 aa10.17□□□□□ -0.78
VPS36-207ENST00000611132 SPTSSBQ8NFR3 76 aa10.17□□□□□ -0.78
VPS36-207ENST00000611132 DOPEY1Q5JWR5 2465 aa10.17□□□□□ -0.78
VPS36-207ENST00000611132 KPRPQ5T749 579 aaPredicted RBP10.16□□□□□ -0.78
VPS36-207ENST00000611132 SPATA3Q8NHX4 192 aa10.16□□□□□ -0.78
VPS36-207ENST00000611132 WFDC13Q8IUB5 93 aa10.16□□□□□ -0.78
VPS36-207ENST00000611132 Q6ZQT0 140 aa10.16□□□□□ -0.78
VPS36-207ENST00000611132 UBE2AP49459 152 aa10.16□□□□□ -0.78
VPS36-207ENST00000611132 LRCOL1A6NCL2 159 aa10.15□□□□□ -0.78
VPS36-207ENST00000611132 IGKV2-24A0A0C4DH68 120 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 PRUNE2Q8WUY3 3088 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 RPL37AP8A6NKH3 93 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 KRTAP10-9P60411 292 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 C1orf137Q5JT78 98 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 C11orf45Q8TAV5 145 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 CDH23Q9H251 3354 aa10.14□□□□□ -0.79
VPS36-207ENST00000611132 DEFB131BA0A096LNP1 70 aa10.13□□□□□ -0.79
VPS36-207ENST00000611132 LOC110117498A0A087WWA1 95 aa10.13□□□□□ -0.79
VPS36-207ENST00000611132 Q8N9L7 120 aa10.13□□□□□ -0.79
VPS36-207ENST00000611132 ESRGQ1W209 222 aa10.11□□□□□ -0.79
VPS36-207ENST00000611132 DNAH14Q0VDD8 3507 aa10.11□□□□□ -0.79
VPS36-207ENST00000611132 VPS13AQ96RL7 3174 aa10.11□□□□□ -0.79
VPS36-207ENST00000611132 TRAV10A0A0B4J240 114 aa10.11□□□□□ -0.79
VPS36-207ENST00000611132 XIRP2A4UGR9 3374 aa10.1□□□□□ -0.79
VPS36-207ENST00000611132 LY6G6DO95868 133 aa10.1□□□□□ -0.79
VPS36-207ENST00000611132 A0A096LNI7 61 aa10.09□□□□□ -0.79
VPS36-207ENST00000611132 MRPL55Q7Z7F7 128 aaKnown RBP10.09□□□□□ -0.79
VPS36-207ENST00000611132 ACANP16112 2415 aa10.09□□□□□ -0.79
VPS36-207ENST00000611132 C10orf25Q5T742 122 aa10.07□□□□□ -0.8
VPS36-207ENST00000611132 ZNF462Q96JM2 2506 aa10.07□□□□□ -0.8
VPS36-207ENST00000611132 TM2D3Q9BRN9 247 aa10.06□□□□□ -0.8
VPS36-207ENST00000611132 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
VPS36-207ENST00000611132 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
VPS36-207ENST00000611132 NBEAQ8NFP9 2946 aa10.05□□□□□ -0.8
VPS36-207ENST00000611132 C2orf48Q96LS8 159 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms