RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 TINCRA0A1B0GVN0 87 aa8.38□□□□□ -1.07
SENP3-209ENST00000610454 HBDP02042 147 aa8.38□□□□□ -1.07
SENP3-209ENST00000610454 NDUFA6P56556 154 aa8.38□□□□□ -1.07
SENP3-209ENST00000610454 Q6ZRP5 223 aa8.38□□□□□ -1.07
SENP3-209ENST00000610454 CST9LQ9H4G1 147 aa8.38□□□□□ -1.07
SENP3-209ENST00000610454 A0A1W2PNN7 141 aa8.37□□□□□ -1.07
SENP3-209ENST00000610454 NDUFC2-KCTD14E9PQ53 114 aa8.36□□□□□ -1.07
SENP3-209ENST00000610454 H3BRM9 83 aa8.36□□□□□ -1.07
SENP3-209ENST00000610454 CXCL5P42830 114 aa8.36□□□□□ -1.07
SENP3-209ENST00000610454 HERC1Q15751 4861 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 F8VRH5 84 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 ATP5LO75964 103 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 PDZD11Q5EBL8 140 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 FAM19A5Q7Z5A7 132 aaPredicted RBP8.35□□□□□ -1.07
SENP3-209ENST00000610454 CBLN2Q8IUK8 224 aa8.35□□□□□ -1.07
SENP3-209ENST00000610454 SMIM1B2RUZ4 78 aa8.34□□□□□ -1.07
SENP3-209ENST00000610454 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
SENP3-209ENST00000610454 IGLV5-45A0A087WSX0 123 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 A0A096LNJ9 63 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 PHF5AQ7RTV0 110 aaKnown RBP8.33□□□□□ -1.08
SENP3-209ENST00000610454 SLC7A5P1Q8MH63 180 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 URB1-AS1Q96HZ7 61 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 YPEL4Q96NS1 127 aa8.33□□□□□ -1.08
SENP3-209ENST00000610454 FAM168BA1KXE4 195 aa8.32□□□□□ -1.08
SENP3-209ENST00000610454 CHCHD1Q96BP2 118 aaKnown RBP8.32□□□□□ -1.08
SENP3-209ENST00000610454 M0QXV9 152 aa8.31□□□□□ -1.08
SENP3-209ENST00000610454 IGLC3P0DOY3 106 aa8.31□□□□□ -1.08
SENP3-209ENST00000610454 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
SENP3-209ENST00000610454 UBE2BP63146 152 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 C1orf137Q5JT78 98 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 BAGE3Q86Y29 109 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 PSORS1C2Q9UIG4 136 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
SENP3-209ENST00000610454 HSBP1O75506 76 aa8.29□□□□□ -1.08
SENP3-209ENST00000610454 LRP1Q07954 4544 aaKnown RBP8.28□□□□□ -1.08
SENP3-209ENST00000610454 C9orf129Q5T035 196 aaKnown RBP8.28□□□□□ -1.08
SENP3-209ENST00000610454 TMEM170BQ5T4T1 132 aa8.28□□□□□ -1.08
SENP3-209ENST00000610454 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
SENP3-209ENST00000610454 TRGC2P03986 189 aa8.27□□□□□ -1.09
SENP3-209ENST00000610454 ZNF22P17026 224 aaPredicted RBP8.27□□□□□ -1.09
SENP3-209ENST00000610454 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
SENP3-209ENST00000610454 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
SENP3-209ENST00000610454 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
SENP3-209ENST00000610454 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
SENP3-209ENST00000610454 C11orf86A6NJI1 115 aa8.25□□□□□ -1.09
SENP3-209ENST00000610454 LBHQ53QV2 105 aaPredicted RBP8.25□□□□□ -1.09
SENP3-209ENST00000610454 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
SENP3-209ENST00000610454 SFTA2Q6UW10 78 aa8.24□□□□□ -1.09
SENP3-209ENST00000610454 FAT3Q8TDW7 4589 aa8.24□□□□□ -1.09
SENP3-209ENST00000610454 TRAV12-1A0A0B4J245 112 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 KRTAP7-1Q8IUC3 87 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 FAM19A2Q8N3H0 131 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 DIRC1Q969H9 104 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 LINC01600Q96MT4 127 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 C22orf24Q9Y442 160 aa8.23□□□□□ -1.09
SENP3-209ENST00000610454 H0Y8G0 127 aa8.22□□□□□ -1.09
SENP3-209ENST00000610454 PFN2P35080 140 aa8.22□□□□□ -1.09
SENP3-209ENST00000610454 SERF1AO75920 110 aa8.21□□□□□ -1.1
SENP3-209ENST00000610454 LEPROTL1O95214 131 aa8.21□□□□□ -1.1
SENP3-209ENST00000610454 MT1HL1P0DM35 61 aa8.21□□□□□ -1.1
SENP3-209ENST00000610454 MRPL55Q7Z7F7 128 aaKnown RBP8.21□□□□□ -1.1
SENP3-209ENST00000610454 NKAPP1Q8N9T2 125 aa8.21□□□□□ -1.1
SENP3-209ENST00000610454 TP73-AS1Q9UF72 201 aa8.21□□□□□ -1.1
SENP3-209ENST00000610454 COLCA2A8K830 154 aa8.2□□□□□ -1.1
SENP3-209ENST00000610454 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
SENP3-209ENST00000610454 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
SENP3-209ENST00000610454 ERG28Q9UKR5 140 aa8.2□□□□□ -1.1
SENP3-209ENST00000610454 NUPR1O60356 82 aa8.19□□□□□ -1.1
SENP3-209ENST00000610454 COX17Q14061 63 aa8.19□□□□□ -1.1
SENP3-209ENST00000610454 HSPB8Q9UJY1 196 aa8.19□□□□□ -1.1
SENP3-209ENST00000610454 TMEM223A0PJW6 202 aa8.18□□□□□ -1.1
SENP3-209ENST00000610454 ODF1Q14990 250 aa8.18□□□□□ -1.1
SENP3-209ENST00000610454 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
SENP3-209ENST00000610454 H0Y9J4 135 aa8.17□□□□□ -1.1
SENP3-209ENST00000610454 FABP4P15090 132 aa8.17□□□□□ -1.1
SENP3-209ENST00000610454 GAGE10A6NGK3 116 aa8.16□□□□□ -1.1
SENP3-209ENST00000610454 ATP6V1G1O75348 118 aa8.16□□□□□ -1.1
SENP3-209ENST00000610454 PLNP26678 52 aa8.16□□□□□ -1.1
SENP3-209ENST00000610454 RPL37AP8A6NKH3 93 aa8.15□□□□□ -1.1
SENP3-209ENST00000610454 LINC00158P58513 81 aa8.15□□□□□ -1.1
SENP3-209ENST00000610454 LINC00310P59036 64 aa8.15□□□□□ -1.1
SENP3-209ENST00000610454 RPL24P83731 157 aaKnown RBP8.15□□□□□ -1.1
SENP3-209ENST00000610454 LINC00167Q96N53 147 aa8.15□□□□□ -1.1
SENP3-209ENST00000610454 SND1-IT1Q9HBX3 110 aa8.15□□□□□ -1.1
SENP3-209ENST00000610454 IGLV5-37A0A075B6J1 123 aa8.14□□□□□ -1.11
SENP3-209ENST00000610454 SCO1O75880 301 aa8.14□□□□□ -1.11
SENP3-209ENST00000610454 ZNF861PO60384 105 aa8.13□□□□□ -1.11
SENP3-209ENST00000610454 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
SENP3-209ENST00000610454 HERVK_113P61574 105 aa8.13□□□□□ -1.11
SENP3-209ENST00000610454 MEIG1Q5JSS6 88 aa8.13□□□□□ -1.11
SENP3-209ENST00000610454 MAP1LC3CQ9BXW4 147 aa8.13□□□□□ -1.11
SENP3-209ENST00000610454 A0A0U1RRA0 63 aa8.12□□□□□ -1.11
SENP3-209ENST00000610454 LINC00587B1AMM8 73 aa8.12□□□□□ -1.11
SENP3-209ENST00000610454 BCE1O60756 84 aa8.12□□□□□ -1.11
SENP3-209ENST00000610454 DPM2O94777 84 aa8.12□□□□□ -1.11
SENP3-209ENST00000610454 HERV-K104P63124 156 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms