RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 GAGE2BQ13066 116 aa9.01□□□□□ -0.97
HDDC2-209ENST00000609477 PMCHL1Q16048 86 aa9.01□□□□□ -0.97
HDDC2-209ENST00000609477 C10orf25Q5T742 122 aa9.01□□□□□ -0.97
HDDC2-209ENST00000609477 BAGE3Q86Y29 109 aa9.01□□□□□ -0.97
HDDC2-209ENST00000609477 C6orf48Q9UBA6 75 aa9.01□□□□□ -0.97
HDDC2-209ENST00000609477 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
HDDC2-209ENST00000609477 HSBP1O75506 76 aa9□□□□□ -0.97
HDDC2-209ENST00000609477 RPL18AQ02543 176 aaKnown RBP9□□□□□ -0.97
HDDC2-209ENST00000609477 TOMM7Q9P0U1 55 aa9□□□□□ -0.97
HDDC2-209ENST00000609477 NDUFA6P56556 154 aa8.99□□□□□ -0.97
HDDC2-209ENST00000609477 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
HDDC2-209ENST00000609477 TRAV12-1A0A0B4J245 112 aa8.98□□□□□ -0.97
HDDC2-209ENST00000609477 NDUFC2-KCTD14E9PQ53 114 aa8.98□□□□□ -0.97
HDDC2-209ENST00000609477 F8VRH5 84 aa8.98□□□□□ -0.97
HDDC2-209ENST00000609477 Q6ZRP5 223 aa8.97□□□□□ -0.97
HDDC2-209ENST00000609477 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
HDDC2-209ENST00000609477 IFI27L1Q96BM0 104 aa8.97□□□□□ -0.97
HDDC2-209ENST00000609477 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
HDDC2-209ENST00000609477 CHTOPQ9Y3Y2 248 aaKnown RBP8.95□□□□□ -0.98
HDDC2-209ENST00000609477 IGLV5-39A0A0G2JS06 123 aa8.94□□□□□ -0.98
HDDC2-209ENST00000609477 SERF1AO75920 110 aa8.94□□□□□ -0.98
HDDC2-209ENST00000609477 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
HDDC2-209ENST00000609477 ZNF22P17026 224 aaPredicted RBP8.94□□□□□ -0.98
HDDC2-209ENST00000609477 ODF1Q14990 250 aa8.94□□□□□ -0.98
HDDC2-209ENST00000609477 SFTA2Q6UW10 78 aa8.94□□□□□ -0.98
HDDC2-209ENST00000609477 A0A1W2PNN7 141 aa8.93□□□□□ -0.98
HDDC2-209ENST00000609477 LEPROTL1O95214 131 aa8.93□□□□□ -0.98
HDDC2-209ENST00000609477 FAM19A2Q8N3H0 131 aa8.93□□□□□ -0.98
HDDC2-209ENST00000609477 C11orf86A6NJI1 115 aa8.92□□□□□ -0.98
HDDC2-209ENST00000609477 GAGE2EQ4V326 116 aa8.92□□□□□ -0.98
HDDC2-209ENST00000609477 GAGE2DQ9UEU5 116 aa8.92□□□□□ -0.98
HDDC2-209ENST00000609477 HSPB8Q9UJY1 196 aa8.92□□□□□ -0.98
HDDC2-209ENST00000609477 SCO1O75880 301 aa8.91□□□□□ -0.98
HDDC2-209ENST00000609477 LINC00310P59036 64 aa8.91□□□□□ -0.98
HDDC2-209ENST00000609477 TMEM170BQ5T4T1 132 aa8.91□□□□□ -0.98
HDDC2-209ENST00000609477 KRTAP29-1A8MX34 341 aaPredicted RBP8.9□□□□□ -0.98
HDDC2-209ENST00000609477 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.98
HDDC2-209ENST00000609477 OXTP01178 125 aa8.89□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BKO60814 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BJP06899 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 S100A1P23297 94 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BOP23527 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BBP33778 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BDP58876 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BCP62807 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 COX17Q14061 63 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST2H2BEQ16778 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.88□□□□□ -0.99
HDDC2-209ENST00000609477 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BHQ93079 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BNQ99877 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 HIST1H2BMQ99879 126 aa8.88□□□□□ -0.99
HDDC2-209ENST00000609477 FLG2Q5D862 2391 aaPredicted RBP8.88□□□□□ -0.99
HDDC2-209ENST00000609477 MYCBP2O75592 4640 aa8.87□□□□□ -0.99
HDDC2-209ENST00000609477 TMEM223A0PJW6 202 aa8.87□□□□□ -0.99
HDDC2-209ENST00000609477 NUPR1O60356 82 aa8.87□□□□□ -0.99
HDDC2-209ENST00000609477 FAM168BA1KXE4 195 aa8.86□□□□□ -0.99
HDDC2-209ENST00000609477 PLNP26678 52 aa8.86□□□□□ -0.99
HDDC2-209ENST00000609477 HNRNPA3P51991 378 aaKnown RBP8.86□□□□□ -0.99
HDDC2-209ENST00000609477 PHF5AQ7RTV0 110 aaKnown RBP8.86□□□□□ -0.99
HDDC2-209ENST00000609477 FAM19A5Q7Z5A7 132 aaPredicted RBP8.86□□□□□ -0.99
HDDC2-209ENST00000609477 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
HDDC2-209ENST00000609477 MAP1LC3CQ9BXW4 147 aa8.85□□□□□ -0.99
HDDC2-209ENST00000609477 PLA2G2DQ9UNK4 145 aa8.85□□□□□ -0.99
HDDC2-209ENST00000609477 M0QXV9 152 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 FABP4P15090 132 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
HDDC2-209ENST00000609477 KRTAP7-1Q8IUC3 87 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 XAGE1AQ9HD64 81 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 TP73-AS1Q9UF72 201 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 PSORS1C2Q9UIG4 136 aa8.84□□□□□ -0.99
HDDC2-209ENST00000609477 J3QL48 77 aa8.83□□□□□ -1
HDDC2-209ENST00000609477 ZNF625Q96I27 306 aaPredicted RBP8.83□□□□□ -1
HDDC2-209ENST00000609477 ERG28Q9UKR5 140 aa8.83□□□□□ -1
HDDC2-209ENST00000609477 DMBT1Q9UGM3 2413 aaPredicted RBP8.82□□□□□ -1
HDDC2-209ENST00000609477 H0Y8G0 127 aa8.82□□□□□ -1
HDDC2-209ENST00000609477 SRSF9Q13242 221 aaKnown RBP eCLIP8.82□□□□□ -1
HDDC2-209ENST00000609477 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
HDDC2-209ENST00000609477 PKHD1L1Q86WI1 4243 aa8.82□□□□□ -1
HDDC2-209ENST00000609477 LINC00587B1AMM8 73 aa8.81□□□□□ -1
HDDC2-209ENST00000609477 DPM2O94777 84 aa8.81□□□□□ -1
HDDC2-209ENST00000609477 HERV-K104P63124 156 aa8.81□□□□□ -1
HDDC2-209ENST00000609477 UBE2BP63146 152 aa8.81□□□□□ -1
HDDC2-209ENST00000609477 C22orf24Q9Y442 160 aa8.81□□□□□ -1
HDDC2-209ENST00000609477 IGKCP01834 107 aa8.8□□□□□ -1
HDDC2-209ENST00000609477 PFN2P35080 140 aa8.8□□□□□ -1
HDDC2-209ENST00000609477 C1orf137Q5JT78 98 aa8.8□□□□□ -1
HDDC2-209ENST00000609477 SERTAD4-AS1Q5TG53 156 aa8.8□□□□□ -1
HDDC2-209ENST00000609477 IGLV5-37A0A075B6J1 123 aa8.79□□□□□ -1
HDDC2-209ENST00000609477 HERVK_113P61574 105 aa8.79□□□□□ -1
HDDC2-209ENST00000609477 MRPL55Q7Z7F7 128 aaKnown RBP8.79□□□□□ -1
HDDC2-209ENST00000609477 REG3GQ6UW15 175 aa8.78□□□□□ -1
HDDC2-209ENST00000609477 PLEKHB2Q96CS7 222 aa8.78□□□□□ -1
HDDC2-209ENST00000609477 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
HDDC2-209ENST00000609477 SYS1-DBNDD2H3BUS1 97 aa8.77□□□□□ -1.01
HDDC2-209ENST00000609477 LEPROTO15243 131 aa8.77□□□□□ -1.01
HDDC2-209ENST00000609477 IGLV7-43P04211 117 aa8.77□□□□□ -1.01
HDDC2-209ENST00000609477 RPL24P83731 157 aaKnown RBP8.77□□□□□ -1.01
HDDC2-209ENST00000609477 SND1-IT1Q9HBX3 110 aa8.77□□□□□ -1.01
HDDC2-209ENST00000609477 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms