RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 STARD9Q9P2P6 4700 aa11.96□□□□□ -0.49
VRK3-225ENST00000601912 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
VRK3-225ENST00000601912 ZNF561-AS1K7EIQ3 104 aa11.96□□□□□ -0.5
VRK3-225ENST00000601912 GCSHP23434 173 aa11.96□□□□□ -0.5
VRK3-225ENST00000601912 CEND1Q8N111 149 aa11.96□□□□□ -0.5
VRK3-225ENST00000601912 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
VRK3-225ENST00000601912 Q6ZVH6 145 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 LITAFQ99732 161 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 EREGO14944 169 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 C15orf56Q8N910 161 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 SPANXDQ9BXN6 97 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 SPANXCQ9NY87 97 aa11.94□□□□□ -0.5
VRK3-225ENST00000601912 PTTG1IPP53801 180 aa11.93□□□□□ -0.5
VRK3-225ENST00000601912 HIGD2BQ4VC39 106 aa11.93□□□□□ -0.5
VRK3-225ENST00000601912 NTN5Q8WTR8 489 aaPredicted RBP11.93□□□□□ -0.5
VRK3-225ENST00000601912 PSCAO43653 123 aa11.92□□□□□ -0.5
VRK3-225ENST00000601912 SMIM13P0DJ93 91 aa11.92□□□□□ -0.5
VRK3-225ENST00000601912 ADAMTSL4-AS1Q5T5F5 129 aa11.92□□□□□ -0.5
VRK3-225ENST00000601912 C6orf223Q8N319 242 aa11.92□□□□□ -0.5
VRK3-225ENST00000601912 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
VRK3-225ENST00000601912 GVQW2A0A096LPI5 108 aaPredicted RBP11.91□□□□□ -0.5
VRK3-225ENST00000601912 A0A0U1RRA0 63 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 LYSTQ99698 3801 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 ERG28Q9UKR5 140 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 LY6G6CO95867 125 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 LINC00158P58513 81 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 C2orf48Q96LS8 159 aa11.91□□□□□ -0.5
VRK3-225ENST00000601912 USP17L23D6RBM5 183 aa11.9□□□□□ -0.5
VRK3-225ENST00000601912 F8WDY8 70 aa11.9□□□□□ -0.5
VRK3-225ENST00000601912 LBHQ53QV2 105 aaPredicted RBP11.9□□□□□ -0.5
VRK3-225ENST00000601912 COPS9Q8WXC6 57 aa11.9□□□□□ -0.5
VRK3-225ENST00000601912 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
VRK3-225ENST00000601912 TMEM238LA0A1B0GVL6 79 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 A6NDN8 102 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 A6NJY4 79 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 IFITM1P13164 125 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 PFN2P35080 140 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 FXYD2P54710 66 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 RPL24P83731 157 aaKnown RBP11.89□□□□□ -0.51
VRK3-225ENST00000601912 UNQ6190/PRO20217Q6UXQ8 127 aa11.89□□□□□ -0.51
VRK3-225ENST00000601912 M0R2N4 97 aa11.88□□□□□ -0.51
VRK3-225ENST00000601912 COX17Q14061 63 aa11.88□□□□□ -0.51
VRK3-225ENST00000601912 COL5A1-AS1Q5SY13 56 aa11.88□□□□□ -0.51
VRK3-225ENST00000601912 MUSTN1Q8IVN3 82 aa11.88□□□□□ -0.51
VRK3-225ENST00000601912 DAND5Q8N907 189 aa11.88□□□□□ -0.51
VRK3-225ENST00000601912 LINC00476Q8WZB0 136 aa11.87□□□□□ -0.51
VRK3-225ENST00000601912 C10orf25Q5T742 122 aa11.87□□□□□ -0.51
VRK3-225ENST00000601912 DNAH1Q9P2D7 4330 aa11.87□□□□□ -0.51
VRK3-225ENST00000601912 VPS13DQ5THJ4 4388 aa11.86□□□□□ -0.51
VRK3-225ENST00000601912 MIR7-3HGQ8N6C7 128 aa11.86□□□□□ -0.51
VRK3-225ENST00000601912 TRBV30A0A0K0K1B3 111 aa11.85□□□□□ -0.51
VRK3-225ENST00000601912 NPC2P61916 151 aa11.85□□□□□ -0.51
VRK3-225ENST00000601912 LINC00308Q8TCZ7 52 aa11.84□□□□□ -0.51
VRK3-225ENST00000601912 LECT2O14960 151 aa11.84□□□□□ -0.51
VRK3-225ENST00000601912 SYCNQ0VAF6 134 aa11.84□□□□□ -0.51
VRK3-225ENST00000601912 C9orf116Q5BN46 136 aaPredicted RBP11.84□□□□□ -0.51
VRK3-225ENST00000601912 Q6ZR54 194 aa11.84□□□□□ -0.51
VRK3-225ENST00000601912 NHP2Q9NX24 153 aaKnown RBP11.84□□□□□ -0.51
VRK3-225ENST00000601912 C6orf48Q9UBA6 75 aa11.84□□□□□ -0.51
VRK3-225ENST00000601912 Q6ZRU5 148 aa11.83□□□□□ -0.52
VRK3-225ENST00000601912 A4D1N5 150 aa11.82□□□□□ -0.52
VRK3-225ENST00000601912 C14orf177Q52M58 125 aa11.82□□□□□ -0.52
VRK3-225ENST00000601912 PPDPFQ9H3Y8 114 aa11.82□□□□□ -0.52
VRK3-225ENST00000601912 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.81□□□□□ -0.52
VRK3-225ENST00000601912 Q6ZRN7 208 aaPredicted RBP11.81□□□□□ -0.52
VRK3-225ENST00000601912 CARD19Q96LW7 228 aa11.8□□□□□ -0.52
VRK3-225ENST00000601912 SOSTDC1Q6X4U4 206 aa11.79□□□□□ -0.52
VRK3-225ENST00000601912 A0A1B0GWB2 263 aa11.78□□□□□ -0.52
VRK3-225ENST00000601912 EIF4EBP3O60516 100 aaPredicted RBP11.78□□□□□ -0.52
VRK3-225ENST00000601912 WFDC2Q14508 124 aa11.78□□□□□ -0.52
VRK3-225ENST00000601912 RNF151Q2KHN1 245 aa11.78□□□□□ -0.52
VRK3-225ENST00000601912 C1orf134Q5TEV5 83 aa11.78□□□□□ -0.52
VRK3-225ENST00000601912 K7ERJ3 54 aa11.77□□□□□ -0.53
VRK3-225ENST00000601912 CFC1BP0CG36 223 aa11.77□□□□□ -0.53
VRK3-225ENST00000601912 CFC1P0CG37 223 aa11.77□□□□□ -0.53
VRK3-225ENST00000601912 SLPIP03973 132 aa11.76□□□□□ -0.53
VRK3-225ENST00000601912 RAB37Q96AX2 223 aa11.76□□□□□ -0.53
VRK3-225ENST00000601912 SND1-IT1Q9HBX3 110 aa11.76□□□□□ -0.53
VRK3-225ENST00000601912 A0A0B4J2C4 111 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 LOC107984156A0A0G2JMH3 177 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 LRCOL1A6NCL2 159 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 NDUFC2-KCTD14E9PQ53 114 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 ARL17AQ8IVW1 177 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 TAX1BP3O14907 124 aa11.75□□□□□ -0.53
VRK3-225ENST00000601912 PRO1854Q9UHT4 67 aa11.73□□□□□ -0.53
VRK3-225ENST00000601912 CNBPP62633 177 aaKnown RBP11.72□□□□□ -0.53
VRK3-225ENST00000601912 ALMS1Q8TCU4 4167 aa11.71□□□□□ -0.54
VRK3-225ENST00000601912 TLX1NBP0CAT3 122 aa11.71□□□□□ -0.54
VRK3-225ENST00000601912 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.7□□□□□ -0.54
VRK3-225ENST00000601912 C9orf118A6NHY6 69 aa11.69□□□□□ -0.54
VRK3-225ENST00000601912 NDUFC2O95298 119 aa11.69□□□□□ -0.54
VRK3-225ENST00000601912 GAGE2EQ4V326 116 aa11.69□□□□□ -0.54
VRK3-225ENST00000601912 GAGE2DQ9UEU5 116 aa11.69□□□□□ -0.54
VRK3-225ENST00000601912 A0A087WTM6 91 aa11.68□□□□□ -0.54
VRK3-225ENST00000601912 RPL18AQ02543 176 aaKnown RBP11.68□□□□□ -0.54
VRK3-225ENST00000601912 Q6ZRP5 223 aa11.68□□□□□ -0.54
VRK3-225ENST00000601912 XAGE1AQ9HD64 81 aa11.68□□□□□ -0.54
VRK3-225ENST00000601912 PGPEP1Q9NXJ5 209 aa11.68□□□□□ -0.54
VRK3-225ENST00000601912 Q8N814 137 aa11.68□□□□□ -0.54
VRK3-225ENST00000601912 KMT2AQ03164 3969 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms