RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
SNRPA-210ENST00000601393 C6orf48Q9UBA6 75 aa10.55□□□□□ -0.72
SNRPA-210ENST00000601393 CDKN2A-AS1Q9UH64 79 aa10.55□□□□□ -0.72
SNRPA-210ENST00000601393 HERC1Q15751 4861 aa10.55□□□□□ -0.72
SNRPA-210ENST00000601393 IGLV5-45A0A087WSX0 123 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 HSBP1O75506 76 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 SERF1AO75920 110 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 LINC00310P59036 64 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 DPH3Q96FX2 82 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 CST9LQ9H4G1 147 aa10.54□□□□□ -0.72
SNRPA-210ENST00000601393 TINCRA0A1B0GVN0 87 aa10.53□□□□□ -0.72
SNRPA-210ENST00000601393 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
SNRPA-210ENST00000601393 HNRNPA3P51991 378 aaKnown RBP10.53□□□□□ -0.72
SNRPA-210ENST00000601393 GAGE2BQ13066 116 aa10.52□□□□□ -0.73
SNRPA-210ENST00000601393 PMVKQ15126 192 aa10.52□□□□□ -0.73
SNRPA-210ENST00000601393 PDZD11Q5EBL8 140 aa10.52□□□□□ -0.73
SNRPA-210ENST00000601393 COA6Q5JTJ3 125 aaKnown RBP10.52□□□□□ -0.73
SNRPA-210ENST00000601393 PMCHL1Q16048 86 aa10.51□□□□□ -0.73
SNRPA-210ENST00000601393 C2orf82Q6UX34 121 aa10.51□□□□□ -0.73
SNRPA-210ENST00000601393 Q8IZM0 81 aa10.51□□□□□ -0.73
SNRPA-210ENST00000601393 GEMIN7Q9H840 131 aaKnown RBP10.51□□□□□ -0.73
SNRPA-210ENST00000601393 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
SNRPA-210ENST00000601393 NUPR1O60356 82 aa10.5□□□□□ -0.73
SNRPA-210ENST00000601393 A0A1W2PNN7 141 aa10.49□□□□□ -0.73
SNRPA-210ENST00000601393 SMIM1B2RUZ4 78 aa10.49□□□□□ -0.73
SNRPA-210ENST00000601393 RPL18AQ02543 176 aaKnown RBP10.49□□□□□ -0.73
SNRPA-210ENST00000601393 Q6ZRP5 223 aa10.49□□□□□ -0.73
SNRPA-210ENST00000601393 ATP5LO75964 103 aa10.48□□□□□ -0.73
SNRPA-210ENST00000601393 IGLC3P0DOY3 106 aa10.48□□□□□ -0.73
SNRPA-210ENST00000601393 FAM19A2Q8N3H0 131 aa10.48□□□□□ -0.73
SNRPA-210ENST00000601393 LINC00469Q8N7U9 141 aa10.48□□□□□ -0.73
SNRPA-210ENST00000601393 C7orf33Q8WU49 177 aa10.48□□□□□ -0.73
SNRPA-210ENST00000601393 NDUFA6P56556 154 aa10.47□□□□□ -0.73
SNRPA-210ENST00000601393 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.73
SNRPA-210ENST00000601393 C9orf116Q5BN46 136 aaPredicted RBP10.46□□□□□ -0.73
SNRPA-210ENST00000601393 PACRGQ96M98 296 aaPredicted RBP10.46□□□□□ -0.73
SNRPA-210ENST00000601393 TOMM7Q9P0U1 55 aa10.46□□□□□ -0.73
SNRPA-210ENST00000601393 PRSS2P07478 247 aa10.45□□□□□ -0.74
SNRPA-210ENST00000601393 PRR3P79522 188 aaKnown RBP10.45□□□□□ -0.74
SNRPA-210ENST00000601393 NDUFC2-KCTD14E9PQ53 114 aa10.44□□□□□ -0.74
SNRPA-210ENST00000601393 LEPROTL1O95214 131 aa10.44□□□□□ -0.74
SNRPA-210ENST00000601393 C6orf226Q5I0X4 101 aa10.44□□□□□ -0.74
SNRPA-210ENST00000601393 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
SNRPA-210ENST00000601393 IFI27L1Q96BM0 104 aa10.43□□□□□ -0.74
SNRPA-210ENST00000601393 HSPB8Q9UJY1 196 aa10.43□□□□□ -0.74
SNRPA-210ENST00000601393 IGLV5-39A0A0G2JS06 123 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 FAM168BA1KXE4 195 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 F8VRH5 84 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 SPINK8P0C7L1 97 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 ZNF22P17026 224 aaPredicted RBP10.42□□□□□ -0.74
SNRPA-210ENST00000601393 CXCL5P42830 114 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 CKS1BP61024 79 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
SNRPA-210ENST00000601393 GAGE2EQ4V326 116 aa10.41□□□□□ -0.74
SNRPA-210ENST00000601393 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
SNRPA-210ENST00000601393 GAGE2DQ9UEU5 116 aa10.41□□□□□ -0.74
SNRPA-210ENST00000601393 TRAV12-1A0A0B4J245 112 aa10.4□□□□□ -0.74
SNRPA-210ENST00000601393 C11orf86A6NJI1 115 aa10.4□□□□□ -0.74
SNRPA-210ENST00000601393 S100A6P06703 90 aa10.4□□□□□ -0.74
SNRPA-210ENST00000601393 H3BRM9 83 aa10.39□□□□□ -0.75
SNRPA-210ENST00000601393 OXTP01178 125 aa10.39□□□□□ -0.75
SNRPA-210ENST00000601393 FABP4P15090 132 aa10.39□□□□□ -0.75
SNRPA-210ENST00000601393 PHF5AQ7RTV0 110 aaKnown RBP10.39□□□□□ -0.75
SNRPA-210ENST00000601393 FAM19A5Q7Z5A7 132 aaPredicted RBP10.36□□□□□ -0.75
SNRPA-210ENST00000601393 KRTAP11-1Q8IUC1 163 aa10.36□□□□□ -0.75
SNRPA-210ENST00000601393 HIST3H2BBQ8N257 126 aa10.36□□□□□ -0.75
SNRPA-210ENST00000601393 MAP1LC3CQ9BXW4 147 aa10.36□□□□□ -0.75
SNRPA-210ENST00000601393 CHTOPQ9Y3Y2 248 aaKnown RBP10.36□□□□□ -0.75
SNRPA-210ENST00000601393 PSORS1C2Q9UIG4 136 aa10.35□□□□□ -0.75
SNRPA-210ENST00000601393 C5orf52A6NGY3 159 aa10.34□□□□□ -0.75
SNRPA-210ENST00000601393 J3QL48 77 aa10.34□□□□□ -0.75
SNRPA-210ENST00000601393 SNRPEP62304 92 aaKnown RBP10.34□□□□□ -0.75
SNRPA-210ENST00000601393 SRSF9Q13242 221 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNRPA-210ENST00000601393 TNXBP22105 4242 aa10.33□□□□□ -0.76
SNRPA-210ENST00000601393 S100A2P29034 98 aa10.33□□□□□ -0.76
SNRPA-210ENST00000601393 ODF1Q14990 250 aa10.33□□□□□ -0.76
SNRPA-210ENST00000601393 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
SNRPA-210ENST00000601393 SYS1-DBNDD2H3BUS1 97 aa10.32□□□□□ -0.76
SNRPA-210ENST00000601393 M0QXV9 152 aa10.32□□□□□ -0.76
SNRPA-210ENST00000601393 TMEM170BQ5T4T1 132 aa10.32□□□□□ -0.76
SNRPA-210ENST00000601393 SERTAD4-AS1Q5TG53 156 aa10.32□□□□□ -0.76
SNRPA-210ENST00000601393 HIST1H2BLQ99880 126 aa10.32□□□□□ -0.76
SNRPA-210ENST00000601393 TMEM223A0PJW6 202 aa10.31□□□□□ -0.76
SNRPA-210ENST00000601393 H0Y8G0 127 aa10.31□□□□□ -0.76
SNRPA-210ENST00000601393 MT1HL1P0DM35 61 aa10.31□□□□□ -0.76
SNRPA-210ENST00000601393 SPINK6Q6UWN8 80 aa10.3□□□□□ -0.76
SNRPA-210ENST00000601393 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
SNRPA-210ENST00000601393 C3orf79P0CE67 100 aa10.29□□□□□ -0.76
SNRPA-210ENST00000601393 PLNP26678 52 aa10.29□□□□□ -0.76
SNRPA-210ENST00000601393 ZNF625Q96I27 306 aaPredicted RBP10.29□□□□□ -0.76
SNRPA-210ENST00000601393 PLA2G2DQ9UNK4 145 aa10.28□□□□□ -0.76
SNRPA-210ENST00000601393 DPM2O94777 84 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 KRTDAPP60985 99 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 C1orf137Q5JT78 98 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 TP73-AS1Q9UF72 201 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 C22orf24Q9Y442 160 aa10.27□□□□□ -0.77
SNRPA-210ENST00000601393 SFTA2Q6UW10 78 aa10.26□□□□□ -0.77
SNRPA-210ENST00000601393 ERG28Q9UKR5 140 aa10.26□□□□□ -0.77
SNRPA-210ENST00000601393 TMA7Q9Y2S6 64 aaKnown RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms