RNA–Protein interactions for RNA: ENST00000601358.5

TIMM50-216, Transcript of translocase of inner mitochondrial membrane 50, humanhuman

TSL 1 (best)

Gene TIMM50, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMM50-216ENST00000601358 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
TIMM50-216ENST00000601358 ZC2HC1BQ5TFG8 222 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 LINC00173Q6ZV60 143 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
TIMM50-216ENST00000601358 C9orf116Q5BN46 136 aaPredicted RBP13.16□□□□□ -0.3
TIMM50-216ENST00000601358 UNQ6190/PRO20217Q6UXQ8 127 aa13.16□□□□□ -0.3
TIMM50-216ENST00000601358 Q6ZRP5 223 aa13.16□□□□□ -0.3
TIMM50-216ENST00000601358 UBE2D1P51668 147 aa13.16□□□□□ -0.3
TIMM50-216ENST00000601358 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
TIMM50-216ENST00000601358 PDZD11Q5EBL8 140 aa13.15□□□□□ -0.3
TIMM50-216ENST00000601358 ATP5LO75964 103 aa13.14□□□□□ -0.31
TIMM50-216ENST00000601358 FAM19A2Q8N3H0 131 aa13.14□□□□□ -0.31
TIMM50-216ENST00000601358 LINC00310P59036 64 aa13.13□□□□□ -0.31
TIMM50-216ENST00000601358 C6orf48Q9UBA6 75 aa13.13□□□□□ -0.31
TIMM50-216ENST00000601358 MT1HL1P0DM35 61 aa13.11□□□□□ -0.31
TIMM50-216ENST00000601358 KIAA0087Q14695 138 aa13.11□□□□□ -0.31
TIMM50-216ENST00000601358 PMVKQ15126 192 aa13.11□□□□□ -0.31
TIMM50-216ENST00000601358 CST9LQ9H4G1 147 aa13.11□□□□□ -0.31
TIMM50-216ENST00000601358 NDUFA6P56556 154 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 SEC11AP67812 179 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 GAGE2EQ4V326 116 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 SPINK6Q6UWN8 80 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 LINC01561Q8N1V8 128 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 GAGE2DQ9UEU5 116 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 HMCN2Q8NDA2 5059 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 NUPR1O60356 82 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 PRSS2P07478 247 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 C2orf82Q6UX34 121 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 PHF5AQ7RTV0 110 aaKnown RBP13.1□□□□□ -0.31
TIMM50-216ENST00000601358 PACRGQ96M98 296 aaPredicted RBP13.1□□□□□ -0.31
TIMM50-216ENST00000601358 PLA2G2DQ9UNK4 145 aa13.1□□□□□ -0.31
TIMM50-216ENST00000601358 TLX1NBP0CAT3 122 aa13.09□□□□□ -0.31
TIMM50-216ENST00000601358 FAM19A3Q7Z5A8 133 aa13.09□□□□□ -0.31
TIMM50-216ENST00000601358 TOMM7Q9P0U1 55 aa13.09□□□□□ -0.31
TIMM50-216ENST00000601358 HERVK_113P63121 156 aa13.08□□□□□ -0.32
TIMM50-216ENST00000601358 IFI27L1Q96BM0 104 aa13.08□□□□□ -0.32
TIMM50-216ENST00000601358 GEMIN7Q9H840 131 aaKnown RBP13.08□□□□□ -0.32
TIMM50-216ENST00000601358 TRBV30A0A0K0K1B3 111 aa13.07□□□□□ -0.32
TIMM50-216ENST00000601358 LEPROTL1O95214 131 aa13.07□□□□□ -0.32
TIMM50-216ENST00000601358 REG3GQ6UW15 175 aa13.07□□□□□ -0.32
TIMM50-216ENST00000601358 FAM168BA1KXE4 195 aa13.06□□□□□ -0.32
TIMM50-216ENST00000601358 CKS1BP61024 79 aa13.06□□□□□ -0.32
TIMM50-216ENST00000601358 C6orf226Q5I0X4 101 aa13.06□□□□□ -0.32
TIMM50-216ENST00000601358 PSORS1C2Q9UIG4 136 aa13.06□□□□□ -0.32
TIMM50-216ENST00000601358 TNXBP22105 4242 aa13.05□□□□□ -0.32
TIMM50-216ENST00000601358 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
TIMM50-216ENST00000601358 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
TIMM50-216ENST00000601358 TINCRA0A1B0GVN0 87 aa13.04□□□□□ -0.32
TIMM50-216ENST00000601358 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
TIMM50-216ENST00000601358 HSPB8Q9UJY1 196 aa13.04□□□□□ -0.32
TIMM50-216ENST00000601358 FABP4P15090 132 aa13.04□□□□□ -0.32
TIMM50-216ENST00000601358 C1orf137Q5JT78 98 aa13.04□□□□□ -0.32
TIMM50-216ENST00000601358 CDKN2A-AS1Q9UH64 79 aa13.04□□□□□ -0.32
TIMM50-216ENST00000601358 NDUFC2-KCTD14E9PQ53 114 aa13.03□□□□□ -0.32
TIMM50-216ENST00000601358 COA6Q5JTJ3 125 aaKnown RBP13.03□□□□□ -0.32
TIMM50-216ENST00000601358 LINC00469Q8N7U9 141 aa13.03□□□□□ -0.32
TIMM50-216ENST00000601358 Q8IZM0 81 aa13.01□□□□□ -0.33
TIMM50-216ENST00000601358 TRAV12-1A0A0B4J245 112 aa13□□□□□ -0.33
TIMM50-216ENST00000601358 CHTOPQ9Y3Y2 248 aaKnown RBP13□□□□□ -0.33
TIMM50-216ENST00000601358 H0Y8G0 127 aa12.99□□□□□ -0.33
TIMM50-216ENST00000601358 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
TIMM50-216ENST00000601358 IGLV5-45A0A087WSX0 123 aa12.97□□□□□ -0.33
TIMM50-216ENST00000601358 H3BRM9 83 aa12.97□□□□□ -0.33
TIMM50-216ENST00000601358 M0QXV9 152 aa12.97□□□□□ -0.33
TIMM50-216ENST00000601358 UBE2BP63146 152 aa12.97□□□□□ -0.33
TIMM50-216ENST00000601358 MAP1LC3CQ9BXW4 147 aa12.97□□□□□ -0.33
TIMM50-216ENST00000601358 C9orf129Q5T035 196 aaKnown RBP12.96□□□□□ -0.34
TIMM50-216ENST00000601358 F8VRH5 84 aa12.95□□□□□ -0.34
TIMM50-216ENST00000601358 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
TIMM50-216ENST00000601358 S100A6P06703 90 aa12.94□□□□□ -0.34
TIMM50-216ENST00000601358 KRTAP7-1Q8IUC3 87 aa12.94□□□□□ -0.34
TIMM50-216ENST00000601358 SMIM1B2RUZ4 78 aa12.93□□□□□ -0.34
TIMM50-216ENST00000601358 IGLV7-43P04211 117 aa12.93□□□□□ -0.34
TIMM50-216ENST00000601358 ZNF22P17026 224 aaPredicted RBP12.93□□□□□ -0.34
TIMM50-216ENST00000601358 ODF1Q14990 250 aa12.93□□□□□ -0.34
TIMM50-216ENST00000601358 TMEM170BQ5T4T1 132 aa12.93□□□□□ -0.34
TIMM50-216ENST00000601358 KRTAP11-1Q8IUC1 163 aa12.93□□□□□ -0.34
TIMM50-216ENST00000601358 SPINK8P0C7L1 97 aa12.92□□□□□ -0.34
TIMM50-216ENST00000601358 CXCL5P42830 114 aa12.92□□□□□ -0.34
TIMM50-216ENST00000601358 KRTAP10-8P60410 259 aa12.92□□□□□ -0.34
TIMM50-216ENST00000601358 UBR4Q5T4S7 5183 aa12.92□□□□□ -0.34
TIMM50-216ENST00000601358 COX7B2Q8TF08 81 aa12.91□□□□□ -0.34
TIMM50-216ENST00000601358 DIRC1Q969H9 104 aa12.91□□□□□ -0.34
TIMM50-216ENST00000601358 XAGE1AQ9HD64 81 aa12.91□□□□□ -0.34
TIMM50-216ENST00000601358 PLNP26678 52 aa12.89□□□□□ -0.35
TIMM50-216ENST00000601358 SYS1-DBNDD2H3BUS1 97 aa12.88□□□□□ -0.35
TIMM50-216ENST00000601358 S100A2P29034 98 aa12.88□□□□□ -0.35
TIMM50-216ENST00000601358 C22orf24Q9Y442 160 aa12.87□□□□□ -0.35
TIMM50-216ENST00000601358 DPM2O94777 84 aa12.86□□□□□ -0.35
TIMM50-216ENST00000601358 HIST3H2BBQ8N257 126 aa12.86□□□□□ -0.35
TIMM50-216ENST00000601358 PMCHL2Q9BQD1 86 aa12.86□□□□□ -0.35
TIMM50-216ENST00000601358 IGLV5-39A0A0G2JS06 123 aa12.85□□□□□ -0.35
TIMM50-216ENST00000601358 LBHQ53QV2 105 aaPredicted RBP12.85□□□□□ -0.35
TIMM50-216ENST00000601358 C3orf79P0CE67 100 aa12.85□□□□□ -0.35
TIMM50-216ENST00000601358 KRTDAPP60985 99 aa12.85□□□□□ -0.35
TIMM50-216ENST00000601358 PET117Q6UWS5 81 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms