RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 C9JQL5 133 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 PPP1R2P9O14990 202 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 CCL25O15444 150 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 APCSP02743 223 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 FGF6P10767 208 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 PMCHP20382 165 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 CEBPGP53567 150 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 HERVK_113P61574 105 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 SMAGPQ0VAQ4 97 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 FAM104BQ5XKR9 115 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 CLPSL2Q6UWE3 100 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 AMN1Q8IY45 258 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 C15orf56Q8N910 161 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 NUP35Q8NFH5 326 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 OR5A1Q8NGJ0 315 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 DEFB104AQ8WTQ1 72 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 TIMM21Q9BVV7 248 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 ST20Q9HBF5 79 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 NAT8Q9UHE5 227 aa2.12□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGLV10-54A0A075B6I4 117 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGHV3-64A0A075B6Q5 118 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 GVQW2A0A096LPI5 108 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 LINC00959A0A1B0GUT2 108 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 A0A1B0GXF2 115 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGKV2-29A2NJV5 120 aaPredicted RBP2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 C7orf77A4D0Y5 90 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 TCAPO15273 167 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 PPBPP02775 128 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 S100A8P05109 93 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 HAMPP81172 84 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 ADIRFQ15847 76 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 AMMECR1LQ6DCA0 310 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 RNASEKQ6P5S7 137 aaKnown RBP2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 ATP5L2Q7Z4Y8 100 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 BTF3L4Q96K17 158 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 C20orf78Q9BR46 151 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 CDC42SE2Q9NRR3 84 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 VPS13BQ7Z7G8 4022 aa2.11□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGLV4-69A0A075B6H9 119 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGHV1-58A0A0C4DH39 117 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 PCP4L1A6NKN8 68 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 C1orf196B1AJZ1 125 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 F8W036 122 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 OXTP01178 125 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 FCER1GP30273 86 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 HBBP68871 147 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 MRPS36P82909 103 aaKnown RBP2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 SS18Q15532 418 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 MRPL51Q4U2R6 128 aaKnown RBP2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 C6orf226Q5I0X4 101 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 ZNF664Q8N3J9 261 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 SPACA4Q8TDM5 124 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 TMEM242Q9NWH2 141 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 PLAC8Q9NZF1 115 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 LINC00474Q9P2X8 69 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 PKIGQ9Y2B9 76 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 UBE2D4Q9Y2X8 147 aa2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 LRP1Q07954 4544 aaKnown RBP2.1□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGKV2-28A0A075B6P5 120 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 A0A096LNJ9 63 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 SMKR1H3BMG3 65 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 K7EMI3 77 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGKV2D-28P01615 120 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 CKS2P33552 79 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 RPL37AP61513 92 aaKnown RBP2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 CLLU1Q5K131 121 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 Q6ZRU5 148 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 SMIM2Q9BVW6 85 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 LAMTOR2Q9Y2Q5 125 aa2.09□□□□□ -2.07
CKS1BP3-201ENST00000600888 IGHV3OR16-9A0A0B4J2B5 98 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 IGKV3OR2-268A0A0C4DH90 116 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 D6R8Y8 96 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 COX7A2LO14548 114 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 APOMO95445 188 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 NPYP01303 97 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 MT-ND4LP03901 98 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 XCL1P47992 114 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 RAB14P61106 215 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 COX6A2Q02221 97 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 SYCNQ0VAF6 134 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 MRPL54Q6P161 138 aaKnown RBP2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 UQCC3Q6UW78 93 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 TMEM136Q6ZRR5 245 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 ORMDL3Q8N138 153 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 IMMP2LQ96T52 175 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 SPANXA1Q9NS26 97 aa2.08□□□□□ -2.08
CKS1BP3-201ENST00000600888 TRAV9-1A0A075B6T8 112 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 A0A096LNI7 61 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 TRAV13-1A0A0B4J241 112 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 LOC107984640A0A0U1RRK4 108 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 TLX1NBP0CAT3 122 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 RAB5AP20339 215 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 G0S2P27469 103 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 IFI27P40305 119 aaPredicted RBP2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 SEC61GP60059 68 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 RPL39P62891 51 aaKnown RBP2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 PP632Q6XCG6 107 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 Q6ZUT4 128 aa2.07□□□□□ -2.08
CKS1BP3-201ENST00000600888 FAM19A3Q7Z5A8 133 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms