RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 Q8IZM0 81 aa9.84□□□□□ -0.83
RPS28-203ENST00000600659 GEMIN7Q9H840 131 aaKnown RBP9.83□□□□□ -0.84
RPS28-203ENST00000600659 TRBV30A0A0K0K1B3 111 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 COLCA2A8K830 154 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 TRGC2P03986 189 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 IGLC3P0DOY3 106 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 LINC00310P59036 64 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 LINC00469Q8N7U9 141 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 C9orf116Q5BN46 136 aaPredicted RBP9.82□□□□□ -0.84
RPS28-203ENST00000600659 KRTAP7-1Q8IUC3 87 aa9.82□□□□□ -0.84
RPS28-203ENST00000600659 TOMM7Q9P0U1 55 aa9.81□□□□□ -0.84
RPS28-203ENST00000600659 KRTAP29-1A8MX34 341 aaPredicted RBP9.8□□□□□ -0.84
RPS28-203ENST00000600659 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
RPS28-203ENST00000600659 C7orf33Q8WU49 177 aa9.8□□□□□ -0.84
RPS28-203ENST00000600659 CHCHD1Q96BP2 118 aaKnown RBP9.8□□□□□ -0.84
RPS28-203ENST00000600659 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
RPS28-203ENST00000600659 FAM168BA1KXE4 195 aa9.79□□□□□ -0.84
RPS28-203ENST00000600659 NDUFC2-KCTD14E9PQ53 114 aa9.79□□□□□ -0.84
RPS28-203ENST00000600659 SPINK8P0C7L1 97 aa9.79□□□□□ -0.84
RPS28-203ENST00000600659 ZNF22P17026 224 aaPredicted RBP9.79□□□□□ -0.84
RPS28-203ENST00000600659 ATP5LO75964 103 aa9.78□□□□□ -0.84
RPS28-203ENST00000600659 PRSS2P07478 247 aa9.78□□□□□ -0.84
RPS28-203ENST00000600659 C9orf129Q5T035 196 aaKnown RBP9.78□□□□□ -0.84
RPS28-203ENST00000600659 IGLV5-39A0A0G2JS06 123 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 SCO1O75880 301 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 GAGE2EQ4V326 116 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 C6orf226Q5I0X4 101 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 BAGE3Q86Y29 109 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 GAGE2DQ9UEU5 116 aa9.77□□□□□ -0.85
RPS28-203ENST00000600659 TNXBP22105 4242 aa9.76□□□□□ -0.85
RPS28-203ENST00000600659 F8VRH5 84 aa9.76□□□□□ -0.85
RPS28-203ENST00000600659 CKS1BP61024 79 aa9.76□□□□□ -0.85
RPS28-203ENST00000600659 PHF5AQ7RTV0 110 aaKnown RBP9.76□□□□□ -0.85
RPS28-203ENST00000600659 COX7B2Q8TF08 81 aa9.76□□□□□ -0.85
RPS28-203ENST00000600659 C11orf86A6NJI1 115 aa9.75□□□□□ -0.85
RPS28-203ENST00000600659 CXCL5P42830 114 aa9.75□□□□□ -0.85
RPS28-203ENST00000600659 NDUFA6P56556 154 aa9.75□□□□□ -0.85
RPS28-203ENST00000600659 KRTAP11-1Q8IUC1 163 aa9.75□□□□□ -0.85
RPS28-203ENST00000600659 FAM19A2Q8N3H0 131 aa9.75□□□□□ -0.85
RPS28-203ENST00000600659 NUPR1O60356 82 aa9.74□□□□□ -0.85
RPS28-203ENST00000600659 IFI27L1Q96BM0 104 aa9.74□□□□□ -0.85
RPS28-203ENST00000600659 TRAV12-1A0A0B4J245 112 aa9.73□□□□□ -0.85
RPS28-203ENST00000600659 SERF1AO75920 110 aa9.73□□□□□ -0.85
RPS28-203ENST00000600659 H3BRM9 83 aa9.72□□□□□ -0.85
RPS28-203ENST00000600659 HSBP1O75506 76 aa9.72□□□□□ -0.85
RPS28-203ENST00000600659 OXTP01178 125 aa9.72□□□□□ -0.85
RPS28-203ENST00000600659 S100A1P23297 94 aa9.72□□□□□ -0.85
RPS28-203ENST00000600659 FAM19A5Q7Z5A7 132 aaPredicted RBP9.72□□□□□ -0.85
RPS28-203ENST00000600659 PSORS1C2Q9UIG4 136 aa9.71□□□□□ -0.86
RPS28-203ENST00000600659 CHTOPQ9Y3Y2 248 aaKnown RBP9.71□□□□□ -0.86
RPS28-203ENST00000600659 SRSF9Q13242 221 aaKnown RBP eCLIP9.7□□□□□ -0.86
RPS28-203ENST00000600659 SERTAD4-AS1Q5TG53 156 aa9.7□□□□□ -0.86
RPS28-203ENST00000600659 MT1HL1P0DM35 61 aa9.69□□□□□ -0.86
RPS28-203ENST00000600659 XAGE1AQ9HD64 81 aa9.69□□□□□ -0.86
RPS28-203ENST00000600659 J3QL48 77 aa9.68□□□□□ -0.86
RPS28-203ENST00000600659 M0QXV9 152 aa9.68□□□□□ -0.86
RPS28-203ENST00000600659 ODF1Q14990 250 aa9.67□□□□□ -0.86
RPS28-203ENST00000600659 TMEM170BQ5T4T1 132 aa9.67□□□□□ -0.86
RPS28-203ENST00000600659 TMEM223A0PJW6 202 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BKO60814 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 LEPROTL1O95214 131 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BJP06899 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BOP23527 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BBP33778 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BDP58876 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BCP62807 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST2H2BEQ16778 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BHQ93079 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BNQ99877 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 HIST1H2BMQ99879 126 aa9.66□□□□□ -0.86
RPS28-203ENST00000600659 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
RPS28-203ENST00000600659 ATP6V1G1O75348 118 aa9.64□□□□□ -0.87
RPS28-203ENST00000600659 SPINK6Q6UWN8 80 aa9.64□□□□□ -0.87
RPS28-203ENST00000600659 C22orf24Q9Y442 160 aa9.63□□□□□ -0.87
RPS28-203ENST00000600659 HMCN2Q8NDA2 5059 aa9.63□□□□□ -0.87
RPS28-203ENST00000600659 C1orf137Q5JT78 98 aa9.62□□□□□ -0.87
RPS28-203ENST00000600659 HSPB8Q9UJY1 196 aa9.62□□□□□ -0.87
RPS28-203ENST00000600659 PLA2G2DQ9UNK4 145 aa9.62□□□□□ -0.87
RPS28-203ENST00000600659 ERG28Q9UKR5 140 aa9.61□□□□□ -0.87
RPS28-203ENST00000600659 H0Y8G0 127 aa9.6□□□□□ -0.87
RPS28-203ENST00000600659 IGLV7-43P04211 117 aa9.6□□□□□ -0.87
RPS28-203ENST00000600659 FABP4P15090 132 aa9.6□□□□□ -0.87
RPS28-203ENST00000600659 TP73-AS1Q9UF72 201 aa9.6□□□□□ -0.87
RPS28-203ENST00000600659 IGLV5-37A0A075B6J1 123 aa9.59□□□□□ -0.87
RPS28-203ENST00000600659 PFN2P35080 140 aa9.59□□□□□ -0.87
RPS28-203ENST00000600659 LINC01600Q96MT4 127 aa9.59□□□□□ -0.87
RPS28-203ENST00000600659 UBE2BP63146 152 aa9.58□□□□□ -0.88
RPS28-203ENST00000600659 Q8NDZ9 215 aa9.58□□□□□ -0.88
RPS28-203ENST00000600659 PMCHL2Q9BQD1 86 aa9.58□□□□□ -0.88
RPS28-203ENST00000600659 TSPEAR-AS2P59090 65 aa9.57□□□□□ -0.88
RPS28-203ENST00000600659 COX17Q14061 63 aa9.57□□□□□ -0.88
RPS28-203ENST00000600659 SFTA2Q6UW10 78 aa9.57□□□□□ -0.88
RPS28-203ENST00000600659 MRPL55Q7Z7F7 128 aaKnown RBP9.57□□□□□ -0.88
RPS28-203ENST00000600659 SND1-IT1Q9HBX3 110 aa9.57□□□□□ -0.88
RPS28-203ENST00000600659 VPREB1P12018 145 aa9.56□□□□□ -0.88
RPS28-203ENST00000600659 COA6Q5JTJ3 125 aaKnown RBP9.56□□□□□ -0.88
RPS28-203ENST00000600659 LINC00167Q96N53 147 aa9.56□□□□□ -0.88
RPS28-203ENST00000600659 MAP1LC3CQ9BXW4 147 aa9.56□□□□□ -0.88
RPS28-203ENST00000600659 DPM2O94777 84 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms