RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 RAB5BP61020 215 aa8.4□□□□□ -1.06
ARHGEF1-222ENST00000600517 C9orf116Q5BN46 136 aaPredicted RBP8.4□□□□□ -1.06
ARHGEF1-222ENST00000600517 Q6ZRP5 223 aa8.4□□□□□ -1.06
ARHGEF1-222ENST00000600517 CBLN2Q8IUK8 224 aa8.4□□□□□ -1.06
ARHGEF1-222ENST00000600517 Q8IZM0 81 aa8.4□□□□□ -1.06
ARHGEF1-222ENST00000600517 CKS1BP61024 79 aa8.39□□□□□ -1.07
ARHGEF1-222ENST00000600517 LINC00469Q8N7U9 141 aa8.39□□□□□ -1.07
ARHGEF1-222ENST00000600517 PACRGQ96M98 296 aaPredicted RBP8.39□□□□□ -1.07
ARHGEF1-222ENST00000600517 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
ARHGEF1-222ENST00000600517 HBDP02042 147 aa8.38□□□□□ -1.07
ARHGEF1-222ENST00000600517 PRR3P79522 188 aaKnown RBP8.38□□□□□ -1.07
ARHGEF1-222ENST00000600517 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 NDUFC2-KCTD14E9PQ53 114 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 SCO1O75880 301 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 GAGE2EQ4V326 116 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 PDZD11Q5EBL8 140 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 GAGE2DQ9UEU5 116 aa8.37□□□□□ -1.07
ARHGEF1-222ENST00000600517 LRP1Q07954 4544 aaKnown RBP8.36□□□□□ -1.07
ARHGEF1-222ENST00000600517 PMCHL1Q16048 86 aa8.36□□□□□ -1.07
ARHGEF1-222ENST00000600517 F8VRH5 84 aa8.35□□□□□ -1.07
ARHGEF1-222ENST00000600517 ATP5LO75964 103 aa8.35□□□□□ -1.07
ARHGEF1-222ENST00000600517 CHCHD1Q96BP2 118 aaKnown RBP8.35□□□□□ -1.07
ARHGEF1-222ENST00000600517 FAM168BA1KXE4 195 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 IGLC3P0DOY3 106 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 S100A1P23297 94 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 CXCL5P42830 114 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 NDUFA6P56556 154 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 PHF5AQ7RTV0 110 aaKnown RBP8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 COX7B2Q8TF08 81 aa8.34□□□□□ -1.07
ARHGEF1-222ENST00000600517 H3BRM9 83 aa8.33□□□□□ -1.08
ARHGEF1-222ENST00000600517 SPINK8P0C7L1 97 aa8.33□□□□□ -1.08
ARHGEF1-222ENST00000600517 SRSF9Q13242 221 aaKnown RBP eCLIP8.33□□□□□ -1.08
ARHGEF1-222ENST00000600517 C9orf129Q5T035 196 aaKnown RBP8.33□□□□□ -1.08
ARHGEF1-222ENST00000600517 KRTAP7-1Q8IUC3 87 aa8.33□□□□□ -1.08
ARHGEF1-222ENST00000600517 COLCA2A8K830 154 aa8.32□□□□□ -1.08
ARHGEF1-222ENST00000600517 BAGE3Q86Y29 109 aa8.32□□□□□ -1.08
ARHGEF1-222ENST00000600517 PSORS1C2Q9UIG4 136 aa8.32□□□□□ -1.08
ARHGEF1-222ENST00000600517 TRGC2P03986 189 aa8.31□□□□□ -1.08
ARHGEF1-222ENST00000600517 SPINK6Q6UWN8 80 aa8.31□□□□□ -1.08
ARHGEF1-222ENST00000600517 FAM19A5Q7Z5A7 132 aaPredicted RBP8.31□□□□□ -1.08
ARHGEF1-222ENST00000600517 IGLV5-39A0A0G2JS06 123 aa8.3□□□□□ -1.08
ARHGEF1-222ENST00000600517 ZNF22P17026 224 aaPredicted RBP8.3□□□□□ -1.08
ARHGEF1-222ENST00000600517 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
ARHGEF1-222ENST00000600517 MT1HL1P0DM35 61 aa8.29□□□□□ -1.08
ARHGEF1-222ENST00000600517 KRTAP11-1Q8IUC1 163 aa8.29□□□□□ -1.08
ARHGEF1-222ENST00000600517 FAT3Q8TDW7 4589 aa8.29□□□□□ -1.08
ARHGEF1-222ENST00000600517 TRAV12-1A0A0B4J245 112 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 M0QXV9 152 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 HSBP1O75506 76 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 ODF1Q14990 250 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 XAGE1AQ9HD64 81 aa8.28□□□□□ -1.08
ARHGEF1-222ENST00000600517 C1orf137Q5JT78 98 aa8.27□□□□□ -1.09
ARHGEF1-222ENST00000600517 FAM19A2Q8N3H0 131 aa8.27□□□□□ -1.09
ARHGEF1-222ENST00000600517 IFI27L1Q96BM0 104 aa8.27□□□□□ -1.09
ARHGEF1-222ENST00000600517 LINC01600Q96MT4 127 aa8.27□□□□□ -1.09
ARHGEF1-222ENST00000600517 CHTOPQ9Y3Y2 248 aaKnown RBP8.27□□□□□ -1.09
ARHGEF1-222ENST00000600517 SERTAD4-AS1Q5TG53 156 aa8.26□□□□□ -1.09
ARHGEF1-222ENST00000600517 LINC00310P59036 64 aa8.25□□□□□ -1.09
ARHGEF1-222ENST00000600517 TMEM170BQ5T4T1 132 aa8.25□□□□□ -1.09
ARHGEF1-222ENST00000600517 REG3GQ6UW15 175 aa8.25□□□□□ -1.09
ARHGEF1-222ENST00000600517 C22orf24Q9Y442 160 aa8.25□□□□□ -1.09
ARHGEF1-222ENST00000600517 SERF1AO75920 110 aa8.24□□□□□ -1.09
ARHGEF1-222ENST00000600517 IGLV7-43P04211 117 aa8.24□□□□□ -1.09
ARHGEF1-222ENST00000600517 UBE2BP63146 152 aa8.24□□□□□ -1.09
ARHGEF1-222ENST00000600517 LBHQ53QV2 105 aaPredicted RBP8.23□□□□□ -1.09
ARHGEF1-222ENST00000600517 PLA2G2DQ9UNK4 145 aa8.23□□□□□ -1.09
ARHGEF1-222ENST00000600517 TMEM223A0PJW6 202 aa8.22□□□□□ -1.09
ARHGEF1-222ENST00000600517 NUPR1O60356 82 aa8.22□□□□□ -1.09
ARHGEF1-222ENST00000600517 TP73-AS1Q9UF72 201 aa8.22□□□□□ -1.09
ARHGEF1-222ENST00000600517 LEPROTL1O95214 131 aa8.21□□□□□ -1.1
ARHGEF1-222ENST00000600517 KRTAP10-8P60410 259 aa8.21□□□□□ -1.1
ARHGEF1-222ENST00000600517 COX17Q14061 63 aa8.21□□□□□ -1.1
ARHGEF1-222ENST00000600517 SFTA2Q6UW10 78 aa8.21□□□□□ -1.1
ARHGEF1-222ENST00000600517 ERG28Q9UKR5 140 aa8.21□□□□□ -1.1
ARHGEF1-222ENST00000600517 IGLV5-37A0A075B6J1 123 aa8.2□□□□□ -1.1
ARHGEF1-222ENST00000600517 PFN2P35080 140 aa8.2□□□□□ -1.1
ARHGEF1-222ENST00000600517 MRPL55Q7Z7F7 128 aaKnown RBP8.2□□□□□ -1.1
ARHGEF1-222ENST00000600517 DIRC1Q969H9 104 aa8.2□□□□□ -1.1
ARHGEF1-222ENST00000600517 ZNF625Q96I27 306 aaPredicted RBP8.2□□□□□ -1.1
ARHGEF1-222ENST00000600517 LINC00167Q96N53 147 aa8.18□□□□□ -1.1
ARHGEF1-222ENST00000600517 SND1-IT1Q9HBX3 110 aa8.18□□□□□ -1.1
ARHGEF1-222ENST00000600517 H0Y9J4 135 aa8.17□□□□□ -1.1
ARHGEF1-222ENST00000600517 FABP4P15090 132 aa8.17□□□□□ -1.1
ARHGEF1-222ENST00000600517 HSPB8Q9UJY1 196 aa8.17□□□□□ -1.1
ARHGEF1-222ENST00000600517 H0Y8G0 127 aa8.16□□□□□ -1.1
ARHGEF1-222ENST00000600517 ZNF861PO60384 105 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 NKAPP1Q8N9T2 125 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
ARHGEF1-222ENST00000600517 GAGE10A6NGK3 116 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms