RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 SMR3BP02814 79 aaPredicted RBP8.8□□□□□ -1
SNRPA-208ENST00000600456 CHTF8P0CG12 524 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 CKS1BP61024 79 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 C6orf226Q5I0X4 101 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 UNQ6190/PRO20217Q6UXQ8 127 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 DPH3Q96FX2 82 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
SNRPA-208ENST00000600456 IGKV2-24A0A0C4DH68 120 aa8.79□□□□□ -1
SNRPA-208ENST00000600456 TRBV30A0A0K0K1B3 111 aa8.79□□□□□ -1
SNRPA-208ENST00000600456 NUPR1O60356 82 aa8.79□□□□□ -1
SNRPA-208ENST00000600456 CXCL5P42830 114 aa8.79□□□□□ -1
SNRPA-208ENST00000600456 KRTAP17-1Q9BYP8 105 aa8.79□□□□□ -1
SNRPA-208ENST00000600456 CHTOPQ9Y3Y2 248 aaKnown RBP8.79□□□□□ -1
SNRPA-208ENST00000600456 ZNF22P17026 224 aaPredicted RBP8.78□□□□□ -1
SNRPA-208ENST00000600456 PTTG1IPP53801 180 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 MAJINQ3KP22 176 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 C10orf25Q5T742 122 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 Q5VSD8 79 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 C2orf82Q6UX34 121 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 C6orf48Q9UBA6 75 aa8.78□□□□□ -1
SNRPA-208ENST00000600456 A0A087WYN8 130 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 C11orf86A6NJI1 115 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 F8VRH5 84 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 SPINK8P0C7L1 97 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 TLX1NBP0CAT3 122 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 LINC00528Q8N1L1 170 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 COX7B2Q8TF08 81 aa8.77□□□□□ -1.01
SNRPA-208ENST00000600456 FAT1Q14517 4588 aa8.76□□□□□ -1.01
SNRPA-208ENST00000600456 RPL18AQ02543 176 aaKnown RBP8.76□□□□□ -1.01
SNRPA-208ENST00000600456 GAGE2BQ13066 116 aa8.76□□□□□ -1.01
SNRPA-208ENST00000600456 IGLV5-39A0A0G2JS06 123 aa8.75□□□□□ -1.01
SNRPA-208ENST00000600456 PLA2G1BP04054 148 aaKnown RBP8.75□□□□□ -1.01
SNRPA-208ENST00000600456 FABP4P15090 132 aa8.75□□□□□ -1.01
SNRPA-208ENST00000600456 COA6Q5JTJ3 125 aaKnown RBP8.75□□□□□ -1.01
SNRPA-208ENST00000600456 TMEM170BQ5T4T1 132 aa8.75□□□□□ -1.01
SNRPA-208ENST00000600456 STPG4Q8N801 248 aa8.75□□□□□ -1.01
SNRPA-208ENST00000600456 NDUFC2-KCTD14E9PQ53 114 aa8.74□□□□□ -1.01
SNRPA-208ENST00000600456 ODF1Q14990 250 aa8.74□□□□□ -1.01
SNRPA-208ENST00000600456 KRTAP4-5Q9BYR2 181 aa8.74□□□□□ -1.01
SNRPA-208ENST00000600456 Q6ZRP5 223 aa8.73□□□□□ -1.01
SNRPA-208ENST00000600456 H0Y8G0 127 aa8.72□□□□□ -1.01
SNRPA-208ENST00000600456 PLNP26678 52 aa8.72□□□□□ -1.01
SNRPA-208ENST00000600456 MAP1LC3CQ9BXW4 147 aa8.72□□□□□ -1.01
SNRPA-208ENST00000600456 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
SNRPA-208ENST00000600456 TMEM223A0PJW6 202 aa8.71□□□□□ -1.02
SNRPA-208ENST00000600456 SFTA2Q6UW10 78 aa8.71□□□□□ -1.02
SNRPA-208ENST00000600456 C9orf116Q5BN46 136 aaPredicted RBP8.7□□□□□ -1.02
SNRPA-208ENST00000600456 C7orf33Q8WU49 177 aa8.7□□□□□ -1.02
SNRPA-208ENST00000600456 PCLOQ9Y6V0 5065 aa8.7□□□□□ -1.02
SNRPA-208ENST00000600456 DPM2O94777 84 aa8.69□□□□□ -1.02
SNRPA-208ENST00000600456 GAGE2EQ4V326 116 aa8.69□□□□□ -1.02
SNRPA-208ENST00000600456 GAGE2DQ9UEU5 116 aa8.69□□□□□ -1.02
SNRPA-208ENST00000600456 A0A1W2PNN7 141 aa8.68□□□□□ -1.02
SNRPA-208ENST00000600456 RPL37AP61513 92 aaKnown RBP8.68□□□□□ -1.02
SNRPA-208ENST00000600456 SRRM2Q9UQ35 2752 aaKnown RBP8.68□□□□□ -1.02
SNRPA-208ENST00000600456 SYS1-DBNDD2H3BUS1 97 aa8.67□□□□□ -1.02
SNRPA-208ENST00000600456 VPS13BQ7Z7G8 4022 aa8.66□□□□□ -1.02
SNRPA-208ENST00000600456 IGKCP01834 107 aa8.66□□□□□ -1.02
SNRPA-208ENST00000600456 INAFM2P0DMQ5 153 aa8.66□□□□□ -1.02
SNRPA-208ENST00000600456 KRTAP10-4P60372 401 aaPredicted RBP8.66□□□□□ -1.02
SNRPA-208ENST00000600456 HERVK_113P61574 105 aa8.65□□□□□ -1.02
SNRPA-208ENST00000600456 C9orf129Q5T035 196 aaKnown RBP8.65□□□□□ -1.02
SNRPA-208ENST00000600456 PET117Q6UWS5 81 aa8.65□□□□□ -1.02
SNRPA-208ENST00000600456 ZNF625Q96I27 306 aaPredicted RBP8.65□□□□□ -1.02
SNRPA-208ENST00000600456 COX17Q14061 63 aa8.64□□□□□ -1.03
SNRPA-208ENST00000600456 PMCHL2Q9BQD1 86 aa8.64□□□□□ -1.03
SNRPA-208ENST00000600456 FAM168BA1KXE4 195 aa8.63□□□□□ -1.03
SNRPA-208ENST00000600456 LINC01545Q5VT33 79 aa8.63□□□□□ -1.03
SNRPA-208ENST00000600456 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
SNRPA-208ENST00000600456 ERG28Q9UKR5 140 aa8.63□□□□□ -1.03
SNRPA-208ENST00000600456 HERV-K104P63124 156 aa8.62□□□□□ -1.03
SNRPA-208ENST00000600456 FAM19A5Q7Z5A7 132 aaPredicted RBP8.62□□□□□ -1.03
SNRPA-208ENST00000600456 XAGE1AQ9HD64 81 aa8.62□□□□□ -1.03
SNRPA-208ENST00000600456 LEPROTO15243 131 aa8.61□□□□□ -1.03
SNRPA-208ENST00000600456 C3orf79P0CE67 100 aa8.61□□□□□ -1.03
SNRPA-208ENST00000600456 PFN2P35080 140 aa8.61□□□□□ -1.03
SNRPA-208ENST00000600456 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 C20orf202A1L168 122 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 LINC00587B1AMM8 73 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 M0QXV9 152 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 S100A6P06703 90 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 KRTDAPP60985 99 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 PRR3P79522 188 aaKnown RBP8.6□□□□□ -1.03
SNRPA-208ENST00000600456 PHF5AQ7RTV0 110 aaKnown RBP8.6□□□□□ -1.03
SNRPA-208ENST00000600456 KRTAP7-1Q8IUC3 87 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 PLA2G2DQ9UNK4 145 aa8.6□□□□□ -1.03
SNRPA-208ENST00000600456 J3QQQ9 107 aa8.59□□□□□ -1.03
SNRPA-208ENST00000600456 NMUP48645 174 aa8.59□□□□□ -1.03
SNRPA-208ENST00000600456 HIST3H2BBQ8N257 126 aa8.59□□□□□ -1.03
SNRPA-208ENST00000600456 E9PLD3 99 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
SNRPA-208ENST00000600456 S100A2P29034 98 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 AKR1D1P51857 326 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 TSPEAR-AS2P59090 65 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
SNRPA-208ENST00000600456 LINC00158P58513 81 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms