RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 H3BRM9 83 aa11.92□□□□□ -0.5
FARP1-229ENST00000600190 LEPROTL1O95214 131 aa11.92□□□□□ -0.5
FARP1-229ENST00000600190 FAM19A2Q8N3H0 131 aa11.92□□□□□ -0.5
FARP1-229ENST00000600190 IFI27L1Q96BM0 104 aa11.92□□□□□ -0.5
FARP1-229ENST00000600190 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
FARP1-229ENST00000600190 NDUFA1O15239 70 aa11.91□□□□□ -0.5
FARP1-229ENST00000600190 C6orf226Q5I0X4 101 aa11.91□□□□□ -0.5
FARP1-229ENST00000600190 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
FARP1-229ENST00000600190 C7orf33Q8WU49 177 aa11.9□□□□□ -0.5
FARP1-229ENST00000600190 CDKN2A-AS1Q9UH64 79 aa11.9□□□□□ -0.5
FARP1-229ENST00000600190 HSPB8Q9UJY1 196 aa11.9□□□□□ -0.5
FARP1-229ENST00000600190 CKS1BP61024 79 aa11.89□□□□□ -0.51
FARP1-229ENST00000600190 PLAC8Q9NZF1 115 aa11.89□□□□□ -0.51
FARP1-229ENST00000600190 CHTOPQ9Y3Y2 248 aaKnown RBP11.89□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BKO60814 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BJP06899 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BOP23527 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BBP33778 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BDP58876 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BCP62807 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST2H2BEQ16778 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BHQ93079 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BNQ99877 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 HIST1H2BMQ99879 126 aa11.88□□□□□ -0.51
FARP1-229ENST00000600190 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
FARP1-229ENST00000600190 MAJINQ3KP22 176 aa11.87□□□□□ -0.51
FARP1-229ENST00000600190 LINC00474Q9P2X8 69 aa11.87□□□□□ -0.51
FARP1-229ENST00000600190 RNF213Q63HN8 5207 aa11.87□□□□□ -0.51
FARP1-229ENST00000600190 LRP2P98164 4655 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 LOC107984640A0A0U1RRK4 108 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 IGLC3P0DOY3 106 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 FABP4P15090 132 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 RNF151Q2KHN1 245 aa11.86□□□□□ -0.51
FARP1-229ENST00000600190 Q8IZM0 81 aa11.85□□□□□ -0.51
FARP1-229ENST00000600190 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
FARP1-229ENST00000600190 IGLV5-45A0A087WSX0 123 aa11.84□□□□□ -0.51
FARP1-229ENST00000600190 H0Y8G0 127 aa11.84□□□□□ -0.51
FARP1-229ENST00000600190 TMEM170BQ5T4T1 132 aa11.84□□□□□ -0.51
FARP1-229ENST00000600190 CXCL5P42830 114 aa11.83□□□□□ -0.52
FARP1-229ENST00000600190 STPG4Q8N801 248 aa11.83□□□□□ -0.52
FARP1-229ENST00000600190 MAP1LC3CQ9BXW4 147 aa11.83□□□□□ -0.52
FARP1-229ENST00000600190 TRBV30A0A0K0K1B3 111 aa11.82□□□□□ -0.52
FARP1-229ENST00000600190 NUPR1O60356 82 aa11.82□□□□□ -0.52
FARP1-229ENST00000600190 UNQ6190/PRO20217Q6UXQ8 127 aa11.82□□□□□ -0.52
FARP1-229ENST00000600190 COX7B2Q8TF08 81 aa11.82□□□□□ -0.52
FARP1-229ENST00000600190 F8VRH5 84 aa11.81□□□□□ -0.52
FARP1-229ENST00000600190 SPINK8P0C7L1 97 aa11.81□□□□□ -0.52
FARP1-229ENST00000600190 PRR3P79522 188 aaKnown RBP11.81□□□□□ -0.52
FARP1-229ENST00000600190 KIAA0087Q14695 138 aa11.81□□□□□ -0.52
FARP1-229ENST00000600190 SMIM1B2RUZ4 78 aa11.8□□□□□ -0.52
FARP1-229ENST00000600190 LINC00310P59036 64 aa11.8□□□□□ -0.52
FARP1-229ENST00000600190 RPL18AQ02543 176 aaKnown RBP11.8□□□□□ -0.52
FARP1-229ENST00000600190 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
FARP1-229ENST00000600190 LINC01600Q96MT4 127 aa11.8□□□□□ -0.52
FARP1-229ENST00000600190 A0A096LNI7 61 aa11.79□□□□□ -0.52
FARP1-229ENST00000600190 ZNF22P17026 224 aaPredicted RBP11.79□□□□□ -0.52
FARP1-229ENST00000600190 C11orf86A6NJI1 115 aa11.78□□□□□ -0.52
FARP1-229ENST00000600190 ODF1Q14990 250 aa11.78□□□□□ -0.52
FARP1-229ENST00000600190 C2orf82Q6UX34 121 aa11.78□□□□□ -0.52
FARP1-229ENST00000600190 PTTG1IPP53801 180 aa11.76□□□□□ -0.53
FARP1-229ENST00000600190 C10orf25Q5T742 122 aa11.76□□□□□ -0.53
FARP1-229ENST00000600190 C6orf48Q9UBA6 75 aa11.76□□□□□ -0.53
FARP1-229ENST00000600190 S100A6P06703 90 aa11.75□□□□□ -0.53
FARP1-229ENST00000600190 TLX1NBP0CAT3 122 aa11.75□□□□□ -0.53
FARP1-229ENST00000600190 PLNP26678 52 aa11.75□□□□□ -0.53
FARP1-229ENST00000600190 SFTA2Q6UW10 78 aa11.75□□□□□ -0.53
FARP1-229ENST00000600190 COA6Q5JTJ3 125 aaKnown RBP11.74□□□□□ -0.53
FARP1-229ENST00000600190 DPM2O94777 84 aa11.73□□□□□ -0.53
FARP1-229ENST00000600190 SPINK6Q6UWN8 80 aa11.73□□□□□ -0.53
FARP1-229ENST00000600190 NDUFC2-KCTD14E9PQ53 114 aa11.72□□□□□ -0.53
FARP1-229ENST00000600190 HERVK_113P61574 105 aa11.72□□□□□ -0.53
FARP1-229ENST00000600190 GAGE2EQ4V326 116 aa11.72□□□□□ -0.53
FARP1-229ENST00000600190 REG3GQ6UW15 175 aa11.72□□□□□ -0.53
FARP1-229ENST00000600190 GAGE2DQ9UEU5 116 aa11.72□□□□□ -0.53
FARP1-229ENST00000600190 IGLV5-39A0A0G2JS06 123 aa11.71□□□□□ -0.53
FARP1-229ENST00000600190 TMEM223A0PJW6 202 aa11.71□□□□□ -0.53
FARP1-229ENST00000600190 IGKCP01834 107 aa11.71□□□□□ -0.53
FARP1-229ENST00000600190 S100A2P29034 98 aa11.7□□□□□ -0.54
FARP1-229ENST00000600190 SYS1-DBNDD2H3BUS1 97 aa11.69□□□□□ -0.54
FARP1-229ENST00000600190 KRTAP10-8P60410 259 aa11.69□□□□□ -0.54
FARP1-229ENST00000600190 C9orf116Q5BN46 136 aaPredicted RBP11.69□□□□□ -0.54
FARP1-229ENST00000600190 PET117Q6UWS5 81 aa11.69□□□□□ -0.54
FARP1-229ENST00000600190 Q6ZRP5 223 aa11.69□□□□□ -0.54
FARP1-229ENST00000600190 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
FARP1-229ENST00000600190 C20orf202A1L168 122 aa11.66□□□□□ -0.54
FARP1-229ENST00000600190 KRTDAPP60985 99 aa11.66□□□□□ -0.54
FARP1-229ENST00000600190 PMCHL2Q9BQD1 86 aa11.66□□□□□ -0.54
FARP1-229ENST00000600190 AKR1D1P51857 326 aa11.65□□□□□ -0.54
FARP1-229ENST00000600190 PLEKHB2Q96CS7 222 aa11.65□□□□□ -0.54
FARP1-229ENST00000600190 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
FARP1-229ENST00000600190 COX17Q14061 63 aa11.64□□□□□ -0.55
FARP1-229ENST00000600190 LEPROTO15243 131 aa11.63□□□□□ -0.55
FARP1-229ENST00000600190 C3orf79P0CE67 100 aa11.63□□□□□ -0.55
FARP1-229ENST00000600190 PFN2P35080 140 aa11.63□□□□□ -0.55
FARP1-229ENST00000600190 HERV-K104P63124 156 aa11.63□□□□□ -0.55
FARP1-229ENST00000600190 ZNF625Q96I27 306 aaPredicted RBP11.63□□□□□ -0.55
FARP1-229ENST00000600190 MYMXA0A1B0GTQ4 84 aa11.62□□□□□ -0.55
FARP1-229ENST00000600190 ERG28Q9UKR5 140 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms